Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_019767.1 Length=40155 Score E Sequences producing significant alignments: (Bits) Value seq237567 450 4e-122 seq237313 322 1e-83 seq237382 273 6e-69 >seq237567 Length=272 Score = 450 bits (498), Expect = 4e-122 Identities = 255/259 (98%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 36754 CTTCGTGAAATCGGGTGGCAGGAGGTTGCGCTAACAACCTCATGCCGTTTTGCCCGTGCA 36813 |||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 14 CTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCGTTTTGCCCGTGCA 73 Query 36814 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 36873 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 74 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 133 Query 36874 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTAAGACATGAAGATG 36933 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 134 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTAAGACATGAAGATG 193 Query 36934 CCAGAAAAACATGACCTGTTAGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 36993 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 194 CCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 253 Query 36994 ATCCTTGCGTTTGCAATGG 37012 ||||||||||||||||||| Sbjct 254 ATCCTTGCGTTTGCAATGG 272 >seq237313 Length=339 Score = 322 bits (356), Expect = 1e-83 Identities = 259/315 (82%), Gaps = 21/315 (7%) Strand=Plus/Plus Query 37620 CTGGTTATGGCCAGTTCGAGCATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAGGCTG 37679 |||||||||| ||||||||||| |||||| ||||||||||||||||||||||||| || | Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60 Query 37680 GCGGAGCTGTCAGAGAGATTGAGGTATGAGCAGAGTAACCGCGATTATCTCCGCTCTGGT 37739 ||||| | |||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120 Query 37740 TATCTGCATCATCGTTTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATCTC 37799 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180 Query 37800 CTACAAAGAGCAGCGCGATAAA---GCCACA----TCCATC--------------ATCGC 37838 |||||||| |||||||| ||| |||| | | | | || | Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 240 Query 37839 TGATATGCAGAAGCGTCAACGTGATGTAGCAGAACTCGACGCCAGATACACAAAGGAGCT 37898 ||| ||||||| |||||| |||||||| || | ||||| || | |||||| |||||| | Sbjct 241 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 300 Query 37899 TGCTGATGCTAACGC 37913 ||||||||||| || Sbjct 301 AGCTGATGCTAAAGC 315 >seq237382 Length=259 Score = 273 bits (302), Expect = 6e-69 Identities = 160/166 (96%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 34279 AAGAAAGCGTCGAGCGGGCATTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 34338 |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 94 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 153 Query 34339 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGTTCAATGT 34398 |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 154 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 213 Query 34399 ACGAGGAAGAAGACGATGGCTAAACCAGCGCGAAGACGATGTAAAA 34444 ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 214 ACGAGGAAGAAGATGATGGCTAAACCAGCGCGAAGACGATGTAAAA 259 Score = 104 bits (114), Expect = 6e-18 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 33825 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACATCGTGCGAGGAAA 33884 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128012170288156