Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_019768.1 Length=41468 Score E Sequences producing significant alignments: (Bits) Value seq237567 444 2e-120 seq237382 273 6e-69 seq237313 98.7 3e-16 >seq237567 Length=272 Score = 444 bits (492), Expect = 2e-120 Identities = 254/259 (98%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 38168 CTTCGTGAAAGCGGGTGGCATGAGGTTGCCCTAACAACCTCCTGCCGTTTTGCCCGTGCA 38227 |||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct 14 CTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCGTTTTGCCCGTGCA 73 Query 38228 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 38287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 74 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 133 Query 38288 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTAAGACATGAAGATG 38347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 134 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTAAGACATGAAGATG 193 Query 38348 CCAGaaaaaaaTGACCTGTTAGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 38407 ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 194 CCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 253 Query 38408 ATCCTTGCGTTTGCAATGG 38426 ||||||||||||||||||| Sbjct 254 ATCCTTGCGTTTGCAATGG 272 >seq237382 Length=259 Score = 273 bits (302), Expect = 6e-69 Identities = 160/166 (96%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 35692 AAGAAAGCGTCGAGCGGGCATTAACGTGCGCTAACTGCGGTCAGAAGTTGCATGTGCTGG 35751 |||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||| Sbjct 94 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 153 Query 35752 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCAATGT 35811 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 154 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 213 Query 35812 ACGAGGAAGAAGACGATGGCTAAACCAGCGCGAAGACGATGTAAAA 35857 ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 214 ACGAGGAAGAAGATGATGGCTAAACCAGCGCGAAGACGATGTAAAA 259 Score = 104 bits (114), Expect = 6e-18 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 35238 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACATCGTGCGAGGAAA 35297 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 >seq237313 Length=339 Score = 98.7 bits (108), Expect = 3e-16 Identities = 215/317 (68%), Gaps = 14/317 (4%) Strand=Plus/Plus Query 39034 CTGGCTACGGTCAGTATGAACACAAGATCGATAGTCTGATTGCCAAATTCAAAGAAGCTG 39093 |||| || ||||||| || || ||| | || |||||||| |||||||||||||| | Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60 Query 39094 GCGGGGTGGTTAATGAAACTTCGCTATAAGCTG-GTTATTTCTGCTTTCCTCCTGACT-- 39150 |||| ||| | || | | ||| ||| | || | | | || |||| || Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGC-GATTATCTCCGCTCTGG 119 Query 39151 TTATTCGGTTCTCTCGTCTG---GTCA------GCTAATCATTACCACAATAAAGCCATT 39201 |||| | || ||||||| |||| | ||||||||||| |||| |||||| Sbjct 120 TTATCTGCATCA-TCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATT 178 Query 39202 GAATACAAAAAACAGCGCGACGAAAACGCTATGGCATTAGATTCGGCTATGGCGACGATC 39261 |||||| ||||||||| |||| || | | | | | ||| | ||| | || Sbjct 179 ACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATT 238 Query 39262 TCTGATATGCAGAAGCGTCAACGTGACGTAGCAGAACTCGATGCCAGATATACAAAGGAG 39321 |||| ||||||| |||||| ||||| || || | |||||||| | ||| || |||||| Sbjct 239 ACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAG 298 Query 39322 CTTGCTGATGCTAACGC 39338 | ||||||||||| || Sbjct 299 TTAGCTGATGCTAAAGC 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132201914775240