Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq24004 187 3e-42
>seq24004
Length=11461
Score = 187 bits (206), Expect = 3e-42
Identities = 484/729 (66%), Gaps = 24/729 (3%)
Strand=Plus/Plus
Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937
|||||| | ||| | || | || ||||||||| |||||||| ||| | || ||||||
Sbjct 8915 TGGAAGTCAATTATAGAAGCCCAAGTGGAGACTGGTACACCATACATGTTGTATAAGGAT 8974
Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997
|||||||||| |||||||| ||||| ||| | || || || || | |||||||||
Sbjct 8975 GCTTGTAACAGAAAGAGTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 9034
Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057
|| || || | | ||||| | ||||| ||| || ||||| | || || ||
Sbjct 9035 ACTGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAGTGTGCAACCTTGCTTCCATA 9094
Query 76058 GCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAA 76117
|| ||| | || ||| |||| | | || ||| ||| | ||||| | | |||
Sbjct 9095 GCACTTAACATGTTTGT---TGAA---AATAACAGATTTAATTTTAAAAAATTAAAAGAA 9148
Query 76118 ATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGT- 76176
|||||||||||||| || ||||| ||||| ||| ||||| ||||||||||| ||
Sbjct 9149 ATCACAAAGATTGTAACTCAAAATTTAAACAAAGTTATTGATGTTAATTTTTATCCTGTC 9208
Query 76177 --TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGT 76234
||| || || || |||||| |||| |||||||||||| | |||||||| ||
Sbjct 9209 CCTGA---AGCAAAAACTTCAAATATGAGACATAGACCTATTGGTATTGGTGTTCAGGGC 9265
Query 76235 CTCGCGGATGTATTTATTTTG-TGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGAT 76293
| || |||| ||| | ||| || || | | || || |||| | |
Sbjct 9266 ATGGCAGATGCGTTTGTGTTGATGAGAATA-TCTTACGAAAGTGAGAAAGCAATACTTCT 9324
Query 76294 GAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC 76353
||| | || |||||||| || ||| | | | | || || ||||||||||| ||
Sbjct 9325 CAATCAACAAATATTTGAAACAATTTATTATGGTGCATTAGAAGCTAGTTGTGAATTAGC 9384
Query 76354 TGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCA 76413
|||| ||||| | || |||| | | || ||| || |||||| | || ||
Sbjct 9385 TGAAAAAGAAGGTGCATACAGCACATATCAAGGGAGTCCAGCAAGCCAAGGTATCCTCCA 9444
Query 76414 GTTTGATATGTGGG---AAGGTGAAACCAAGCTCAACTACGACTGGGATGTTCTCAAGGA 76470
|| ||||||||||| || | || | || | ||||||| ||| || || ||
Sbjct 9445 GTATGATATGTGGGACAAAACTCCTACAGACCT---TTGGGACTGGGCTGTCCTTAAAGA 9501
Query 76471 ACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCC 76528
| || ||| | | ||| | || || ||| ||||| || || ||||| || |||
Sbjct 9502 AAAGATAGCAA--AACATGGTTTGCGCAATTCTCTATTGATAGCTCCTATGCCGACTGCC 9559
Query 76529 TCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588
|| || |||||||| | || || | ||||| |||||||| | ||| |||| || |||
Sbjct 9560 TCTACTGCACAAATTCTTGGCAACACTGAATCTTTTGAACCCTTTACATCAAATATTTAC 9619
Query 76589 CTGAGAAGA 76597
| ||||||
Sbjct 9620 CAAAGAAGA 9628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 594797683888320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |