Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq24004 187 3e-42 >seq24004 Length=11461 Score = 187 bits (206), Expect = 3e-42 Identities = 484/729 (66%), Gaps = 24/729 (3%) Strand=Plus/Plus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 |||||| | ||| | || | || ||||||||| |||||||| ||| | || |||||| Sbjct 8915 TGGAAGTCAATTATAGAAGCCCAAGTGGAGACTGGTACACCATACATGTTGTATAAGGAT 8974 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 |||||||||| |||||||| ||||| ||| | || || || || | ||||||||| Sbjct 8975 GCTTGTAACAGAAAGAGTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 9034 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 || || || | | ||||| | ||||| ||| || ||||| | || || || Sbjct 9035 ACTGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAGTGTGCAACCTTGCTTCCATA 9094 Query 76058 GCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAA 76117 || ||| | || ||| |||| | | || ||| ||| | ||||| | | ||| Sbjct 9095 GCACTTAACATGTTTGT---TGAA---AATAACAGATTTAATTTTAAAAAATTAAAAGAA 9148 Query 76118 ATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGT- 76176 |||||||||||||| || ||||| ||||| ||| ||||| ||||||||||| || Sbjct 9149 ATCACAAAGATTGTAACTCAAAATTTAAACAAAGTTATTGATGTTAATTTTTATCCTGTC 9208 Query 76177 --TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGT 76234 ||| || || || |||||| |||| |||||||||||| | |||||||| || Sbjct 9209 CCTGA---AGCAAAAACTTCAAATATGAGACATAGACCTATTGGTATTGGTGTTCAGGGC 9265 Query 76235 CTCGCGGATGTATTTATTTTG-TGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGAT 76293 | || |||| ||| | ||| || || | | || || |||| | | Sbjct 9266 ATGGCAGATGCGTTTGTGTTGATGAGAATA-TCTTACGAAAGTGAGAAAGCAATACTTCT 9324 Query 76294 GAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGC 76353 ||| | || |||||||| || ||| | | | | || || ||||||||||| || Sbjct 9325 CAATCAACAAATATTTGAAACAATTTATTATGGTGCATTAGAAGCTAGTTGTGAATTAGC 9384 Query 76354 TGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCA 76413 |||| ||||| | || |||| | | || ||| || |||||| | || || Sbjct 9385 TGAAAAAGAAGGTGCATACAGCACATATCAAGGGAGTCCAGCAAGCCAAGGTATCCTCCA 9444 Query 76414 GTTTGATATGTGGG---AAGGTGAAACCAAGCTCAACTACGACTGGGATGTTCTCAAGGA 76470 || ||||||||||| || | || | || | ||||||| ||| || || || Sbjct 9445 GTATGATATGTGGGACAAAACTCCTACAGACCT---TTGGGACTGGGCTGTCCTTAAAGA 9501 Query 76471 ACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCC 76528 | || ||| | | ||| | || || ||| ||||| || || ||||| || ||| Sbjct 9502 AAAGATAGCAA--AACATGGTTTGCGCAATTCTCTATTGATAGCTCCTATGCCGACTGCC 9559 Query 76529 TCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 || || |||||||| | || || | ||||| |||||||| | ||| |||| || ||| Sbjct 9560 TCTACTGCACAAATTCTTGGCAACACTGAATCTTTTGAACCCTTTACATCAAATATTTAC 9619 Query 76589 CTGAGAAGA 76597 | |||||| Sbjct 9620 CAAAGAAGA 9628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594797683888320