Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_021190.1
Length=46150
Score E
Sequences producing significant alignments: (Bits) Value
seq234085 325 1e-84
seq237313 147 6e-31
seq235925 105 2e-18
>seq234085
Length=323
Score = 325 bits (360), Expect = 1e-84
Identities = 266/323 (82%), Gaps = 0/323 (0%)
Strand=Plus/Plus
Query 1291 GTTCCTGGGTGATAAACGTATTGAGGGGTCTGTCTGGCCCAAATCTATTCGCGGCTCAAC 1350
|||||||||||| | |||||||| || || |||||||| || || || || ||||| ||
Sbjct 1 GTTCCTGGGTGACATGCGTATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCAC 60
Query 1351 GCCAAAAACAAAGGGGACCTGCCAGATTGAGCGTGCTGCCAGCGAGTCCGGGCATTTCAT 1410
||||||| | || ||||| |||||||||||||| ||||| || ||| |||||| ||
Sbjct 61 GCCAAAAGTGAGAGGCACCTGTCAGATTGAGCGTGCAGCCAGTGAATCCCCGCATTTTAT 120
Query 1411 GCGTTTTCATGTTGCCTGTCCGCACTGTGGTGAAGAGCAGTACCTTAAATTCGGCGACAA 1470
|||||||||||||||||| ||||| || || || |||||||| |||||||| ||||||||
Sbjct 121 GCGTTTTCATGTTGCCTGCCCGCATTGCGGGGAGGAGCAGTATCTTAAATTTGGCGACAA 180
Query 1471 AGAGACCCCGTTCGGGCTGAAATGGACACCGGGCGAACCCTCCAGCGTCTTTTACCTGTG 1530
|||||| ||||| || || |||||||| |||| || ||||||||||| ||||| || ||
Sbjct 181 AGAGACGCCGTTTGGCCTCAAATGGACGCCGGATGACCCCTCCAGCGTGTTTTATCTCTG 240
Query 1531 TGAACATAATGCCTGCGTCATTAAGCAGCAGGAGCTGGATTTCACTGAAGCTCGTTACAT 1590
|| ||||||||||||||||| |||||||||||||| || ||||| || ||||| ||
Sbjct 241 CGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGACTTTACTGATGCCCGTTATAT 300
Query 1591 CTGCGACACCACCGGGATCTGGA 1613
|||||| | |||||||||||||
Sbjct 301 CTGCGAAAAGACCGGGATCTGGA 323
>seq237313
Length=339
Score = 147 bits (162), Expect = 6e-31
Identities = 170/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 43118 ATGAGCCGATTAACCGCAATCATCTGCGCTGTCGTTATCTGCCTGCTGGTTTCCATGGCC 43177
|||||| || | ||||| || |||| |||| | ||||||||| | | || | | || |
Sbjct 86 ATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 145
Query 43178 TGGGCCATTAACCACTACCGCGACAACGCCATCACCTACAAAGACCAGCGCGACAAAGCC 43237
||||| |||| || ||||| || |||||||| |||||||||| |||||||||||||
Sbjct 146 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAAT 205
Query 43238 ACCAAAAGTCTCCGCCTGGCTAACGACACCATCAAAGACATGCAGACCCGTCAGCGTGAT 43297
||| | || ||||| |||| | || | |||||||||| ||||||||||||
Sbjct 206 GCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGAT 265
Query 43298 GTCGCTGCACTGGATGCCAAATACACCGGAGAACTGGCTGATGCGAAAG 43346
|| ||||| || ||||| |||||||| || | |||||||| ||||
Sbjct 266 GTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAG 314
>seq235925
Length=245
Score = 105 bits (116), Expect = 2e-18
Identities = 84/101 (83%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 3635 GAGCGCGATAGTGAAGGCTATGTATGCCGCTACCATCGAGAGTGAACTGGATACCCAATC 3694
|||||| | |||||||| ||||||||||| ||||| |||||||| |||||||| || ||
Sbjct 117 GAGCGCCGTTGTGAAGGCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCAGTC 58
Query 3695 GGCGATGGACTTTATTCTCGGCGCGGATAATAAAGAGCAGC 3735
|||||||| |||||||| |||||| | | | | |||||||
Sbjct 57 AGCGATGGATTTTATTCTGGGCGCGAACAGTCAGGAGCAGC 17
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 147142039442816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |