Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_021190.1 Length=46150 Score E Sequences producing significant alignments: (Bits) Value seq234085 325 1e-84 seq237313 147 6e-31 seq235925 105 2e-18 >seq234085 Length=323 Score = 325 bits (360), Expect = 1e-84 Identities = 266/323 (82%), Gaps = 0/323 (0%) Strand=Plus/Plus Query 1291 GTTCCTGGGTGATAAACGTATTGAGGGGTCTGTCTGGCCCAAATCTATTCGCGGCTCAAC 1350 |||||||||||| | |||||||| || || |||||||| || || || || ||||| || Sbjct 1 GTTCCTGGGTGACATGCGTATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCAC 60 Query 1351 GCCAAAAACAAAGGGGACCTGCCAGATTGAGCGTGCTGCCAGCGAGTCCGGGCATTTCAT 1410 ||||||| | || ||||| |||||||||||||| ||||| || ||| |||||| || Sbjct 61 GCCAAAAGTGAGAGGCACCTGTCAGATTGAGCGTGCAGCCAGTGAATCCCCGCATTTTAT 120 Query 1411 GCGTTTTCATGTTGCCTGTCCGCACTGTGGTGAAGAGCAGTACCTTAAATTCGGCGACAA 1470 |||||||||||||||||| ||||| || || || |||||||| |||||||| |||||||| Sbjct 121 GCGTTTTCATGTTGCCTGCCCGCATTGCGGGGAGGAGCAGTATCTTAAATTTGGCGACAA 180 Query 1471 AGAGACCCCGTTCGGGCTGAAATGGACACCGGGCGAACCCTCCAGCGTCTTTTACCTGTG 1530 |||||| ||||| || || |||||||| |||| || ||||||||||| ||||| || || Sbjct 181 AGAGACGCCGTTTGGCCTCAAATGGACGCCGGATGACCCCTCCAGCGTGTTTTATCTCTG 240 Query 1531 TGAACATAATGCCTGCGTCATTAAGCAGCAGGAGCTGGATTTCACTGAAGCTCGTTACAT 1590 || ||||||||||||||||| |||||||||||||| || ||||| || ||||| || Sbjct 241 CGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGACTTTACTGATGCCCGTTATAT 300 Query 1591 CTGCGACACCACCGGGATCTGGA 1613 |||||| | ||||||||||||| Sbjct 301 CTGCGAAAAGACCGGGATCTGGA 323 >seq237313 Length=339 Score = 147 bits (162), Expect = 6e-31 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 43118 ATGAGCCGATTAACCGCAATCATCTGCGCTGTCGTTATCTGCCTGCTGGTTTCCATGGCC 43177 |||||| || | ||||| || |||| |||| | ||||||||| | | || | | || | Sbjct 86 ATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 145 Query 43178 TGGGCCATTAACCACTACCGCGACAACGCCATCACCTACAAAGACCAGCGCGACAAAGCC 43237 ||||| |||| || ||||| || |||||||| |||||||||| ||||||||||||| Sbjct 146 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAAT 205 Query 43238 ACCAAAAGTCTCCGCCTGGCTAACGACACCATCAAAGACATGCAGACCCGTCAGCGTGAT 43297 ||| | || ||||| |||| | || | |||||||||| |||||||||||| Sbjct 206 GCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGAT 265 Query 43298 GTCGCTGCACTGGATGCCAAATACACCGGAGAACTGGCTGATGCGAAAG 43346 || ||||| || ||||| |||||||| || | |||||||| |||| Sbjct 266 GTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAG 314 >seq235925 Length=245 Score = 105 bits (116), Expect = 2e-18 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 3635 GAGCGCGATAGTGAAGGCTATGTATGCCGCTACCATCGAGAGTGAACTGGATACCCAATC 3694 |||||| | |||||||| ||||||||||| ||||| |||||||| |||||||| || || Sbjct 117 GAGCGCCGTTGTGAAGGCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCAGTC 58 Query 3695 GGCGATGGACTTTATTCTCGGCGCGGATAATAAAGAGCAGC 3735 |||||||| |||||||| |||||| | | | | ||||||| Sbjct 57 AGCGATGGATTTTATTCTGGGCGCGAACAGTCAGGAGCAGC 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147142039442816