Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq53127 158 2e-33
seq31223 150 3e-31
seq207359 141 1e-28
seq44559 127 3e-24
seq32346 120 4e-22
>seq53127
Length=7988
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | |||||||||||||| |||||||| || || ||||| |||| ||||
Sbjct 6966 ATGCAAATTTTTGTGAAAACATTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCT 7025
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| || ||| || || || || ||||| || |||||||| |||||||| |||
Sbjct 7026 GATACAATAGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCAA 7085
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||| |||||| ||||| ||||| || |||||| | || || ||||| ||||||
Sbjct 7086 CAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACATTGTCAGACTATAAT 7145
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| || ||| | || | |||||||| || | ||||||| ||
Sbjct 7146 ATCCAGAAGGAGTCTACTTTGCATTTAGTTTTGCGTCTAAGAGGTGG 7192
Score = 143 bits (158), Expect = 4e-29
Identities = 147/191 (77%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||||||| | || ||| ||||||| |||||||| ||||| ||||| |||| |||
Sbjct 6053 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTC 6112
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||||| || ||| || || ||||| ||||| ||||||||||| ||||| || ||
Sbjct 6113 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCA 6172
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||| || | |||| ||| || || ||||| |||||| | || | |||||||||||
Sbjct 6173 ACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATAA 6232
Query 156002 TATATCCAAAG 156012
||| || ||||
Sbjct 6233 TAT-TCAAAAG 6242
Score = 141 bits (156), Expect = 1e-28
Identities = 141/183 (77%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||||||| | || ||| ||||||| |||||||| ||||| ||||| |||| |||
Sbjct 6509 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTC 6568
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||||| ||| ||| || || ||||| || |||||||| ||||| || ||||| ||
Sbjct 6569 TGATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 6628
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||||| | |||| ||| || |||||||| |||||| | || |||| || || ||
Sbjct 6629 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGACTACAA 6688
Query 156002 TAT 156004
|||
Sbjct 6689 TAT 6691
Score = 118 bits (130), Expect = 2e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||||||| | || ||| ||||||| || ||||| ||| | ||||| || ||
Sbjct 6737 AATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 6796
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||| | || ||| || || ||||| |||||||| |||||||| |||||||| ||
Sbjct 6797 TGACACAATCGAAAATGTTAAGGCGAAAATTCAAGATAAGGAAGGCATTCCTCCAGACCA 6856
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||||| | |||| ||| || |||||||| || ||| | || |||| || || ||
Sbjct 6857 ACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAGGATGGACGTACACTATCTGACTACAA 6916
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGT 156031
||| ||||| | || | ||||||||
Sbjct 6917 TATTCAGAAAGAATCTACTTTACATTTAGT 6946
>seq31223
Length=3647
Score = 150 bits (166), Expect = 3e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| |||||||| | ||||||||||| ||||| |||||||| |||| ||||
Sbjct 273 ATGCAAATTTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 214
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||| |||||| |||||| ||||| ||||||||||| |||||||| |||
Sbjct 213 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 154
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | | |||| ||| || ||||| | |||||| | || | || || |||||
Sbjct 153 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTATAAC 94
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| | || | || ||||| | | |||||||| |||
Sbjct 93 ATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGGT 46
Score = 109 bits (120), Expect = 8e-19
Identities = 154/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
|||||| || ||| |||| || | || |||||||| || || ||||| || || ||
Sbjct 502 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTC 443
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | ||| ||| ||||| || || ||||| ||||| || || || ||||| ||
Sbjct 442 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 383
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||| || | |||| ||| || || || || |||||| | | || ||||| ||||||||
Sbjct 382 ACAGAGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAA 323
Query 156002 TATATCCAAA-GAGGCGACGCTTCATTTAGTGTT 156034
||| || ||| || |||| || |||||||| ||
Sbjct 322 TAT-TCAAAAGGAATCGACCCTACATTTAGTATT 290
>seq207359
Length=487
Score = 141 bits (156), Expect = 1e-28
Identities = 125/156 (80%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| |||||||| | ||||||||||| ||||| |||||||| |||| ||||
Sbjct 215 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 274
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||| |||||| |||||| ||||| ||||||||||| ||||| || |||
Sbjct 275 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 334
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978
||| | | |||| ||| || ||||| | ||||||
Sbjct 335 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGAT 370
Score = 91.5 bits (100), Expect = 2e-13
Identities = 135/189 (71%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 155847 ACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAAT 155906
|| |||||||| ||||| | || || ||| || || | ||| ||| |||||
Sbjct 11 ACAGGAAAAACCATTACTCTTGAGGTAGAACCGTCCGACACTATCGAAAATGTGAAGGCA 70
Query 155907 AAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAG 155966
|| || ||||| ||||| || || || ||||| ||||| || |||||| || || ||
Sbjct 71 AAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAACAGAGGCTGATTTTCGCTGGAAAA 130
Query 155967 CAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA-GAGGCGACGCTTCA 156025
|| || |||||| | | || ||||| ||||||||||| || ||| || | || || ||
Sbjct 131 CAACTGGAAGATGGCCGTACATTATCTGATTATAATAT-TCAAAAGGAATCTACCCTACA 189
Query 156026 TTTAGTGTT 156034
|||||| ||
Sbjct 190 TTTAGTATT 198
>seq44559
Length=2984
Score = 127 bits (140), Expect = 3e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||||||| | ||||||||||||||||| || ||||| | ||||| ||| |||
Sbjct 436 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 495
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || || || ||| ||||||||| ||||| || ||||| || ||||| |||
Sbjct 496 GACACAATCGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 555
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| | | |||| ||| || ||||| | |||||| | ||||| || ||||| |||
Sbjct 556 CAGCGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 615
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032
|| |||||| | || || || ||||||
Sbjct 616 ATTCAGAAAGAGTCAACCCTGCACTTAGTG 645
Score = 122 bits (134), Expect = 1e-22
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||||||| | |||||| | ||||||||||| || || || ||||| || |||
Sbjct 663 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCTTC 722
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | ||| ||| || ||| ||| || |||||||| ||||| || |||||||| ||
Sbjct 723 AGACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCA 782
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||| | | || | || |||||||| || |||||| | | || | || || || ||
Sbjct 783 ACAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACAA 842
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGT 156031
||| |||||| | || ||||| || ||
Sbjct 843 TATCCAGAAAGAGTCCACCCTTCACTTGGT 872
Score = 114 bits (126), Expect = 2e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || ||| |||| || |||||||| ||||||||||| ||| ||
Sbjct 892 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 951
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||| || ||| || || ||||| ||||| || || || ||||| |||
Sbjct 952 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 1011
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | | |||| || || |||||||| || ||| | | ||| | || || || |||
Sbjct 1012 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTACAAT 1071
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| |||||| | || | || || || ||| | ||| |||| |||
Sbjct 1072 ATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGGT 1119
Score = 93.3 bits (102), Expect = 6e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||||||| | || ||| | || || || ||||| || | || || || |||
Sbjct 208 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAGGTGGAGCCATCT 267
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||| || || ||| || ||||||||||| || || || ||||| |||
Sbjct 268 GACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCAA 327
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | | || | ||| || |||||||| |||||| | || | || || || ||
Sbjct 328 CAACGTCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGTCGCACCCTGTCTGACTACAAC 387
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031
|| |||||| | || |||||||||||
Sbjct 388 ATCCAAAAAGAGTCTACCCTTCATTTAGT 416
>seq32346
Length=5591
Score = 120 bits (132), Expect = 4e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 18413 TCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTT 18472
|| || | ||| ||||||| ||||| ||||| ||||| ||||| || ||||| | ||
Sbjct 3797 TCCTTAGGATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTT 3856
Query 18473 TCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAA 18532
|||||||| || ||||||| ||| || | || || || | ||||| ||| ||
Sbjct 3857 TCCATAGCAATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAA 3916
Query 18533 AATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACA 18592
|| | || ||||| ||||||||||| ||||| |||| || || || ||||| || |||
Sbjct 3917 AAACGCTCCACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACA 3976
Query 18593 TATTTAATGAAATGTTTTTCATTATCCTT 18621
| || || |||||||| ||| ||| ||
Sbjct 3977 TGCTTGATAAAATGTTTCTCACAATCTTT 4005
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 17869 GTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTAAATTCAT 17928
||||||||| ||||| ||||| ||||||||||| || ||||||||||| || | ||||||
Sbjct 954 GTATTCTCCAACTTTCTTCTCAAAGAAATTTGTTTTGCCTTCCAATGAGATGAGATTCAT 1013
Query 17929 AAAATCAAATGGATT 17943
|||||| ||||||||
Sbjct 1014 AAAATCGAATGGATT 1028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 729698212082400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |