Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq31223 163 6e-35 seq207359 154 3e-32 seq44559 154 3e-32 seq53127 141 2e-28 seq88586 131 3e-25 seq32346 122 2e-22 >seq31223 Length=3647 Score = 163 bits (180), Expect = 6e-35 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | |||||| ||||| || || | ||||| ||||| |||||||| ||| Sbjct 500 ATTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCA 559 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || ||| | || |||||||| || ||||| || || || | |||||||| || Sbjct 560 GAAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGA 619 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| ||||| ||||||||| |||| ||| || | ||| Sbjct 620 GGAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCA 679 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| | ||||||||||||||| || | |||||| | ||| ||||||||||| Sbjct 680 ACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 732 Score = 159 bits (176), Expect = 7e-34 Identities = 176/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATC 192365 ||||| || | ||| || ||||||||||||| || | | |||| || ||||||||||| Sbjct 272 ATACCGCCACGAAGCCGCAATACTAAATGTAGGGTCGATTCCTTTTGA-ATATTATAATC 330 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 ||||||||| || |||| |||| |||||| |||||||| || | ||||||||||| || Sbjct 331 AGATAATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGG 390 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || || ||||| ||||| || || || ||||| |||| || |||| || Sbjct 391 GGGAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTC 450 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||| |||| ||| |||||||| || || | || |||| ||| ||||||||| Sbjct 451 TACCTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 502 Score = 158 bits (174), Expect = 2e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | ||| | |||||| || ||||||| ||||| ||| ||||| ||| Sbjct 44 ATACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTATAGTCA 103 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||| || |||| || ||||| || || ||||| || | | |||||||| || Sbjct 104 GACAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCTGGA 163 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| |||||| ||| ||||| || | || || | ||| Sbjct 164 GGAATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCA 223 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| |||||| ||||| ||||| | |||||||| ||| || ||||| Sbjct 224 ACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAAATTTGCAT 273 >seq207359 Length=487 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||| | ||| | |||||| || ||||||| ||||| ||| || || ||| Sbjct 444 ATACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCA 385 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||| || |||| || ||||| || || ||||| || | | |||||||| || Sbjct 384 GACAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGA 325 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| |||||| ||| ||||| || | || || | ||| Sbjct 324 GGAATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCA 265 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| |||||| ||||| ||||| | |||||||| ||| || ||||| Sbjct 264 ACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 215 Score = 150 bits (166), Expect = 4e-31 Identities = 159/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 ||||| || | ||| || ||||||||||||| |||| || ||| || ||||||||||| Sbjct 216 ATACCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGA-ATATTATAATC 158 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 ||||||||| || |||| |||| |||||| ||||| || || | ||||||||||| || Sbjct 157 AGATAATGTACGGCCATCTTCCAGTTGTTTTCCAGCGAAAATCAGCCTCTGTTGATCTGG 98 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || || ||||| ||||| || || || ||||| |||| || |||| ||| Sbjct 97 GGGAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTC 38 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGT 192512 ||| || |||||||||||||| || || Sbjct 37 TACCTCAAGAGTAATGGTTTTTCCTGT 11 >seq44559 Length=2984 Score = 154 bits (170), Expect = 3e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||| ||||| | ||||| ||| | |||| ||| || ||| || || ||| Sbjct 209 ATACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCA 150 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||||||| |||||||||||||| | | ||| ||||||||| Sbjct 149 GACAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGT 90 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||| ||||| |||||| ||||||||| |||| ||| || | ||| Sbjct 89 GGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCC 30 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTA 192514 ||||| || |||||||| || ||||||| Sbjct 29 ACTTCCAGGGTAATGGTCTTTCCAGTTA 2 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | |||||| | ||||||||| ||||||| ||||| ||| ||||| || Sbjct 1349 ATCCCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCC 1290 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 |||| || || |||| || || ||||||||||||||||| | | |||||| || || Sbjct 1289 GATAGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGG 1230 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || ||||| || ||| || ||||| |||| || || | || Sbjct 1229 GGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCC 1170 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||| ||||| || ||||| | || |||| ||| |||||||| Sbjct 1169 ACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 1120 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||||| ||||| | ||||||||| | |||| |||||| ||| || || ||| Sbjct 437 ATACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCA 378 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | || || ||||||||||| | | |||||||| || Sbjct 377 GACAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGG 318 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||||||||| || ||| |||||||| || | || || | || Sbjct 317 GGAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCC 258 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| || || || || |||| ||| || | |||||| ||||| Sbjct 257 ACCTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 208 >seq53127 Length=7988 Score = 141 bits (156), Expect = 2e-28 Identities = 172/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 || ||||| ||||| || | || || || ||||||| || ||| || ||||||||||| Sbjct 6283 ATTCCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTTTGA-ATATTATAATC 6225 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 || | ||| ||| |||| |||| ||||| || ||||| || | |||||||| ||||| Sbjct 6224 TGACAGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGG 6165 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || |||||||| ||||| ||||| || ||||| ||| | ||| || | ||| Sbjct 6164 AGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTC 6105 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| | || || ||||| ||||| | ||| || | |||||| |||||| Sbjct 6104 CACTTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 6053 Score = 138 bits (152), Expect = 2e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || |||||||| ||||| | ||||||||||||||||| ||||| ||||| || ||| Sbjct 6967 ATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCA 6908 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 |||| ||| ||| |||| || | || || |||||||| || | || ||||| || || Sbjct 6907 GATAGTGTACGTCCATCCTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGA 6848 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| |||||||| ||||| || ||||| || | || || | || Sbjct 6847 GGAATGCCTTCCTTATCTTGAATTTTCGCCTTAACATTTTCGATTGTGTCAGAGGGCTCA 6788 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| || || || || || ||||| | ||| || | |||||| |||||| Sbjct 6787 ACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 6737 Score = 109 bits (120), Expect = 1e-18 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||||||||| | | || | || | |||| ||||| ||||||||| || || Sbjct 7648 CCACCTCTAAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTCTGAC 7589 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 ||||| || |||| |||| ||| || || || || || | ||| |||||||| || || Sbjct 7588 AATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 7529 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || ||||| |||||||| || || || ||||| ||| | ||| || | ||| || Sbjct 7528 ATGCCTTCCTTATCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACC 7469 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || | ||| || ||||| ||||| | || || | ||| || |||||| Sbjct 7468 TCCAAAGTGATAGTTTTCCCAGTCAGCGTCTTTACAAAAATTTGCATT 7421 >seq88586 Length=4530 Score = 131 bits (144), Expect = 3e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 192308 TACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCA 192366 |||| || | ||| || | || | ||| || || | || ||| || || || || ||| Sbjct 2177 TACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGA-ATGTTGTAGTCA 2235 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || ||||| ||| |||| || | |||||||||||||||||| || | || || || ||| Sbjct 2236 GACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGT 2295 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| |||||||| |||||| ||| ||||| ||||| ||| || | || Sbjct 2296 GGAATACCTTCCTTATCTTGGATTTTAGCTTTAACATTTTCTATAGTATCAGAGGCCTCC 2355 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || || |||||||||||||| || | || || | || || |||||| Sbjct 2356 ACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 2406 >seq32346 Length=5591 Score = 122 bits (134), Expect = 2e-22 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 50106 ATTAATAAAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAAT 50165 ||||||||||| ||||| || ||||| ||| ||||||||| |||||||| ||| || Sbjct 3824 ATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGAAAACCATAGAAG 3883 Query 50166 TGTCTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACA 50225 || ||||| | ||||| || | || || || || || |||||| ||| Sbjct 3884 CACCTGGCTTCAGTCACTTGAACCTCTTGTGAAAAACGCTCCACCAAGTTCTCATTAACA 3943 Query 50226 ATACCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCT 50285 ||||||||||| || || ||||||||||| || | || ||||||||||| ||| |||| Sbjct 3944 ATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGATAAAATGTTTCTCACAATCT 4003 Query 50286 TTTAAATTTTCCCAA 50300 ||||| | |||||| Sbjct 4004 TTTAATGTCTCCCAA 4018 Score = 116 bits (128), Expect = 7e-21 Identities = 163/225 (72%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 49846 CCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTT 49905 |||| |||||||| |||| ||||||||| ||||| ||||| ||||| | |||| |||| Sbjct 2979 CCTCATCCCTAGAAATAAGTTCATTACTGAAAGTCAATCCGGGCATCAGACCTCGTTTTT 3038 Query 49906 TAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCGACACACGCAAATG 49965 | | |||||||||||| ||||| || | || || ||||| ||||| || ||||| | Sbjct 3039 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAAAG 3098 Query 49966 CTATTATTCTTGCTCCAAACATTAATTTATCAT-CT-AATATCCAATTTATAGCCCAATC 50023 | ||||| | | |||||| || | | || | || ||||| | || ||||| || Sbjct 3099 CAATTATACGTTCTCCAA--ATGTAGCTGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 3156 Query 50024 TGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 50068 ||| || || || | | | |||| | |||| || || || ||||| Sbjct 3157 TGCCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATAA 3201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981482820168900