Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq31223 163 6e-35
seq207359 154 3e-32
seq44559 154 3e-32
seq53127 141 2e-28
seq88586 131 3e-25
seq32346 122 2e-22
>seq31223
Length=3647
Score = 163 bits (180), Expect = 6e-35
Identities = 176/233 (76%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| | |||||| ||||| || || | ||||| ||||| |||||||| |||
Sbjct 500 ATTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCA 559
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || ||| | || |||||||| || ||||| || || || | |||||||| ||
Sbjct 560 GAAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGA 619
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| ||||| ||||||||| |||| ||| || | |||
Sbjct 620 GGAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCA 679
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||||| | ||||||||||||||| || | |||||| | ||| |||||||||||
Sbjct 680 ACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 732
Score = 159 bits (176), Expect = 7e-34
Identities = 176/232 (76%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATC 192365
||||| || | ||| || ||||||||||||| || | | |||| || |||||||||||
Sbjct 272 ATACCGCCACGAAGCCGCAATACTAAATGTAGGGTCGATTCCTTTTGA-ATATTATAATC 330
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
||||||||| || |||| |||| |||||| |||||||| || | ||||||||||| ||
Sbjct 331 AGATAATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGG 390
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| || || ||||| ||||| || || || ||||| |||| || |||| ||
Sbjct 391 GGGAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTC 450
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||| |||| ||| |||||||| || || | || |||| ||| |||||||||
Sbjct 451 TACCTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 502
Score = 158 bits (174), Expect = 2e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | ||| | |||||| || ||||||| ||||| ||| ||||| |||
Sbjct 44 ATACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTATAGTCA 103
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | ||| || |||| || ||||| || || ||||| || | | |||||||| ||
Sbjct 104 GACAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCTGGA 163
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||| ||||| |||||| ||| ||||| || | || || | |||
Sbjct 164 GGAATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCA 223
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||||| |||||| ||||| ||||| | |||||||| ||| || |||||
Sbjct 224 ACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAAATTTGCAT 273
>seq207359
Length=487
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | ||| | |||||| || ||||||| ||||| ||| || || |||
Sbjct 444 ATACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCA 385
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | ||| || |||| || ||||| || || ||||| || | | |||||||| ||
Sbjct 384 GACAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGA 325
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||| ||||| |||||| ||| ||||| || | || || | |||
Sbjct 324 GGAATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCA 265
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||||| |||||| ||||| ||||| | |||||||| ||| || |||||
Sbjct 264 ACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 215
Score = 150 bits (166), Expect = 4e-31
Identities = 159/207 (77%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
||||| || | ||| || ||||||||||||| |||| || ||| || |||||||||||
Sbjct 216 ATACCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGA-ATATTATAATC 158
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
||||||||| || |||| |||| |||||| ||||| || || | ||||||||||| ||
Sbjct 157 AGATAATGTACGGCCATCTTCCAGTTGTTTTCCAGCGAAAATCAGCCTCTGTTGATCTGG 98
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| || || ||||| ||||| || || || ||||| |||| || |||| |||
Sbjct 97 GGGAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTC 38
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGT 192512
||| || |||||||||||||| || ||
Sbjct 37 TACCTCAAGAGTAATGGTTTTTCCTGT 11
>seq44559
Length=2984
Score = 154 bits (170), Expect = 3e-32
Identities = 159/208 (76%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||||| ||||| | ||||| ||| | |||| ||| || ||| || || |||
Sbjct 209 ATACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCA 150
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || |||| |||||||| |||||||||||||| | | ||| |||||||||
Sbjct 149 GACAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGT 90
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| ||||| |||||| ||||||||| |||| ||| || | |||
Sbjct 89 GGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCC 30
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTA 192514
||||| || |||||||| || |||||||
Sbjct 29 ACTTCCAGGGTAATGGTCTTTCCAGTTA 2
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||| | |||||| | ||||||||| ||||||| ||||| ||| ||||| ||
Sbjct 1349 ATCCCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCC 1290
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|||| || || |||| || || ||||||||||||||||| | | |||||| || ||
Sbjct 1289 GATAGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGG 1230
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || || || ||||| || ||| || ||||| |||| || || | ||
Sbjct 1229 GGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCC 1170
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | ||| ||||| || ||||| | || |||| ||| ||||||||
Sbjct 1169 ACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 1120
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||||| ||||| | ||||||||| | |||| |||||| ||| || || |||
Sbjct 437 ATACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCA 378
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || |||| || | || || ||||||||||| | | |||||||| ||
Sbjct 377 GACAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGG 318
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||||||||| || ||| |||||||| || | || || | ||
Sbjct 317 GGAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCC 258
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || ||||| || || || || |||| ||| || | |||||| |||||
Sbjct 257 ACCTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 208
>seq53127
Length=7988
Score = 141 bits (156), Expect = 2e-28
Identities = 172/232 (74%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
|| ||||| ||||| || | || || || ||||||| || ||| || |||||||||||
Sbjct 6283 ATTCCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTTTGA-ATATTATAATC 6225
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
|| | ||| ||| |||| |||| ||||| || ||||| || | |||||||| |||||
Sbjct 6224 TGACAGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGG 6165
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
|| || |||||||| ||||| ||||| || ||||| ||| | ||| || | |||
Sbjct 6164 AGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTC 6105
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||||| | || || ||||| ||||| | ||| || | |||||| ||||||
Sbjct 6104 CACTTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 6053
Score = 138 bits (152), Expect = 2e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| |||||||| ||||| | ||||||||||||||||| ||||| ||||| || |||
Sbjct 6967 ATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCA 6908
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|||| ||| ||| |||| || | || || |||||||| || | || ||||| || ||
Sbjct 6907 GATAGTGTACGTCCATCCTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGA 6848
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| |||||||| ||||| || ||||| || | || || | ||
Sbjct 6847 GGAATGCCTTCCTTATCTTGAATTTTCGCCTTAACATTTTCGATTGTGTCAGAGGGCTCA 6788
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||||| || || || || || ||||| | ||| || | |||||| ||||||
Sbjct 6787 ACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 6737
Score = 109 bits (120), Expect = 1e-18
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369
||||||||||| | | || | || | |||| ||||| ||||||||| || ||
Sbjct 7648 CCACCTCTAAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTCTGAC 7589
Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429
||||| || |||| |||| ||| || || || || || | ||| |||||||| || ||
Sbjct 7588 AATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 7529
Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489
|| ||||| |||||||| || || || ||||| ||| | ||| || | ||| ||
Sbjct 7528 ATGCCTTCCTTATCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACC 7469
Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| | ||| || ||||| ||||| | || || | ||| || ||||||
Sbjct 7468 TCCAAAGTGATAGTTTTCCCAGTCAGCGTCTTTACAAAAATTTGCATT 7421
>seq88586
Length=4530
Score = 131 bits (144), Expect = 3e-25
Identities = 169/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 192308 TACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCA 192366
|||| || | ||| || | || | ||| || || | || ||| || || || || |||
Sbjct 2177 TACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGA-ATGTTGTAGTCA 2235
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| ||||| ||| |||| || | |||||||||||||||||| || | || || || |||
Sbjct 2236 GACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGT 2295
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| |||||||| |||||| ||| ||||| ||||| ||| || | ||
Sbjct 2296 GGAATACCTTCCTTATCTTGGATTTTAGCTTTAACATTTTCTATAGTATCAGAGGCCTCC 2355
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| || || |||||||||||||| || | || || | || || ||||||
Sbjct 2356 ACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 2406
>seq32346
Length=5591
Score = 122 bits (134), Expect = 2e-22
Identities = 144/195 (74%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 50106 ATTAATAAAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAAT 50165
||||||||||| ||||| || ||||| ||| ||||||||| |||||||| ||| ||
Sbjct 3824 ATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGAAAACCATAGAAG 3883
Query 50166 TGTCTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACA 50225
|| ||||| | ||||| || | || || || || || |||||| |||
Sbjct 3884 CACCTGGCTTCAGTCACTTGAACCTCTTGTGAAAAACGCTCCACCAAGTTCTCATTAACA 3943
Query 50226 ATACCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCT 50285
||||||||||| || || ||||||||||| || | || ||||||||||| ||| ||||
Sbjct 3944 ATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGATAAAATGTTTCTCACAATCT 4003
Query 50286 TTTAAATTTTCCCAA 50300
||||| | ||||||
Sbjct 4004 TTTAATGTCTCCCAA 4018
Score = 116 bits (128), Expect = 7e-21
Identities = 163/225 (72%), Gaps = 4/225 (2%)
Strand=Plus/Plus
Query 49846 CCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTT 49905
|||| |||||||| |||| ||||||||| ||||| ||||| ||||| | |||| ||||
Sbjct 2979 CCTCATCCCTAGAAATAAGTTCATTACTGAAAGTCAATCCGGGCATCAGACCTCGTTTTT 3038
Query 49906 TAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCGACACACGCAAATG 49965
| | |||||||||||| ||||| || | || || ||||| ||||| || ||||| |
Sbjct 3039 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAAAG 3098
Query 49966 CTATTATTCTTGCTCCAAACATTAATTTATCAT-CT-AATATCCAATTTATAGCCCAATC 50023
| ||||| | | |||||| || | | || | || ||||| | || ||||| ||
Sbjct 3099 CAATTATACGTTCTCCAA--ATGTAGCTGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 3156
Query 50024 TGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 50068
||| || || || | | | |||| | |||| || || || |||||
Sbjct 3157 TGCCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATAA 3201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981482820168900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |