Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq31223 163 5e-35 seq44559 145 1e-29 seq53127 141 2e-28 seq207359 138 2e-27 seq88586 127 4e-24 seq32346 116 7e-21 >seq31223 Length=3647 Score = 163 bits (180), Expect = 5e-35 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | ||| || ||||| || || | ||||| ||||| ||||||||| || Sbjct 500 ATTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCA 559 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || ||| |||| |||||||| || ||||| ||||| || | ||||| || || Sbjct 560 GAAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGA 619 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| ||||| ||||||||| |||||||| || | ||| Sbjct 620 GGAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCA 679 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| | ||||||||||||||| || | |||||| | || ||||||||||| Sbjct 680 ACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 732 Score = 141 bits (156), Expect = 2e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| || | ||| || ||||||||||||| || | || || |||||||||||| Sbjct 272 ATACCGCCACGAAGCCGCAATACTAAATGTAGGGTCGATTCCTTTTGAATATTATAATCA 331 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || | || |||| |||||| ||||||||||| | |||||||| || || Sbjct 332 GATAATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGG 391 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| ||||| || || || ||||| ||||| || |||| ||| Sbjct 392 GGAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCT 451 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || |||| ||| |||||||| || || | || |||| || ||||||||| Sbjct 452 ACCTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 502 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | |||||| || ||||||| ||||| || ||||| || Sbjct 44 ATACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTATAGTCA 103 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || || ||||| || || |||||||| | | ||||| || || Sbjct 104 GACAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCTGGA 163 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| |||||| ||| ||||| || || || || | ||| Sbjct 164 GGAATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCA 223 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| |||||| ||||| ||||| | |||||||| || || ||||| Sbjct 224 ACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAAATTTGCAT 273 >seq44559 Length=2984 Score = 145 bits (160), Expect = 1e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | || || | ||||| || | || | |||||| |||||| ||||| Sbjct 665 ATTCCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCA 606 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || |||| || | || |||||||| || ||||||||||| | | ||||||||| || Sbjct 605 GACAAAGTGCGACCATCTTCCAATTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGG 546 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || ||||| ||||||||| ||| ||||| || || || || | |||| Sbjct 545 GGGATGCCCTCCTTATCCTGTATTTTAGCTTTGACATTCTCGATTGTGTCAGATGGTTCT 486 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || |||||||| || ||||| |||||||| | ||||| ||||| Sbjct 485 ACTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 436 Score = 127 bits (140), Expect = 4e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||||| || || | ||||| ||| | |||| ||| || || || || || Sbjct 209 ATACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCA 150 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || |||||||| ||||||||||| || | | ||| || |||||| Sbjct 149 GACAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGT 90 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| ||||| |||||| ||||||||| |||||||| || | ||| Sbjct 89 GGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCC 30 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTA 172047 ||||| || |||||||| || ||||||| Sbjct 29 ACTTCCAGGGTAATGGTCTTTCCAGTTA 2 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | ||| || | ||||||||| ||||||| ||||| || ||||| || Sbjct 1349 ATCCCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCC 1290 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| || || | || || || |||||||||||||| || | | ||||||||| || Sbjct 1289 GATAGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGG 1230 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || || || ||||| || ||| || ||||| ||||| || || | || Sbjct 1229 GGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCC 1170 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || | ||| ||||| || ||||| | || |||| || |||||||| Sbjct 1169 ACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 1120 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||||| || || | ||||||||| | |||| |||||| || || || || Sbjct 437 ATACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCA 378 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || || | || || |||||||| || | | ||||| || || Sbjct 377 GACAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGG 318 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||||||||| || ||| |||||||| || || || || | || Sbjct 317 GGAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCC 258 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || || ||||| || || || || |||| ||| || | ||||| ||||| Sbjct 257 ACCTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 208 >seq53127 Length=7988 Score = 141 bits (156), Expect = 2e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| ||||| || | || || || ||||||| || || ||||||||||||| Sbjct 6283 ATTCCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCT 6224 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | ||| | || |||| ||||| || |||||||| | |||||||||||||| Sbjct 6223 GACAGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGA 6164 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| ||||| || ||||| ||| ||||| || | ||| Sbjct 6163 GGAATGCCTTCTTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCC 6104 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | || || ||||| ||||| | ||| || | ||||| |||||| Sbjct 6103 ACTTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 6053 Score = 129 bits (142), Expect = 1e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| || || | ||||||||||||||||| ||||| |||||| || || Sbjct 6967 ATCCCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCA 6908 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| | ||| | || || | || || ||||||||||| | || |||||||| || Sbjct 6907 GATAGTGTACGTCCATCCTCAAGCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGA 6848 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| |||||||| ||||| || ||||| || || || || | || Sbjct 6847 GGAATGCCTTCCTTATCTTGAATTTTCGCCTTAACATTTTCGATTGTGTCAGAGGGCTCA 6788 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| || || || || || ||||| | ||| || | ||||| |||||| Sbjct 6787 ACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 6737 Score = 123 bits (136), Expect = 4e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| || |||| ||||| || ||||||| ||||| ||| || ||||| Sbjct 6055 ATTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCA 5996 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| | ||| | || || | || || ||||||||||| | ||| || || || || Sbjct 5995 GATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGG 5936 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || ||||| |||||||| || ||||| ||| ||||| || ||||| || | || Sbjct 5935 GGAATTCCCTCTTTATCCTGAATTTTTGCTTTAACATTTTCAATTGTATCAGAAGGCTCA 5876 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | ||| || || || ||||| | ||| || | ||| || |||||| Sbjct 5875 ACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCATT 5825 Score = 111 bits (122), Expect = 3e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| || || | ||| | ||| ||||||| || || |||||| || || Sbjct 6739 ATTCCACCTCTCAGCCGCAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCA 6680 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| | ||| | || || | || || ||||||||||| | ||| || || || || Sbjct 6679 GATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGG 6620 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || |||||||| || ||||| || ||||| || ||||| || | ||| Sbjct 6619 GGAATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCC 6560 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | || || ||||| ||||| | ||| || | ||||| |||||| Sbjct 6559 ACTTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 6509 Score = 102 bits (112), Expect = 1e-16 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| | || | ||| | || ||||| | || || |||||| || || Sbjct 6511 ATTCCACCTCTCAACCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCA 6452 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| | ||| | || || | || || ||||||||||| | ||| || || || || Sbjct 6451 GATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGG 6392 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || |||||||| || ||||| ||| ||||| || ||||| || | ||| Sbjct 6391 GGAATACCCTCTTTATCCTGAATTTTTGCTTTAACATTTTCAATTGTATCAGAAGCTTCC 6332 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| | ||| || || || ||||| | ||| |||| || || |||||| Sbjct 6331 ACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTAACAAAAATTTGCATT 6281 Score = 100 bits (110), Expect = 5e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||||||||||| | || | || | |||| ||||| |||||||| ||||| Sbjct 7648 CCACCTCTAAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTCTGAC 7589 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 || | || | || |||| ||| || || || ||||| | ||| ||||| || || || Sbjct 7588 AATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 7529 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 || ||||| |||||||| || || || ||||| ||| ||||| || | ||| || Sbjct 7528 ATGCCTTCCTTATCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACC 7469 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || | ||| || ||||| ||||| | || || | || || |||||| Sbjct 7468 TCCAAAGTGATAGTTTTCCCAGTCAGCGTCTTTACAAAAATTTGCATT 7421 >seq207359 Length=487 Score = 138 bits (152), Expect = 2e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||| || | ||| || ||||||||||||| |||| || || |||||||||||| Sbjct 216 ATACCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCA 157 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||| | || | || |||| |||||| ||||| ||||| | |||||||| || || Sbjct 156 GATAATGTACGGCCATCTTCCAGTTGTTTTCCAGCGAAAATCAGCCTCTGTTGATCTGGG 97 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| ||||| || || || ||||| ||||| || |||| |||| Sbjct 96 GGAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTCT 37 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGT 172045 || || |||||||||||||| || || Sbjct 36 ACCTCAAGAGTAATGGTTTTTCCTGT 11 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || | |||||| || ||||||| ||||| || || || || Sbjct 444 ATACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCA 385 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || | || || ||||| || || |||||||| | | ||||| || || Sbjct 384 GACAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGA 325 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| |||||| ||| ||||| || || || || | ||| Sbjct 324 GGAATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCA 265 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| |||||| ||||| ||||| | |||||||| || || ||||| Sbjct 264 ACTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 215 >seq88586 Length=4530 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171841 TACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTG 171900 |||| || | |||||| | || | ||| || || | || || ||| || || || | Sbjct 2177 TACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAG 2236 Query 171901 ATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTG 171960 | || | ||| | || || | ||||||||||||||| || || | || ||||| |||| Sbjct 2237 ACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTG 2296 Query 171961 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTA 172020 | || ||||| |||||||| |||||| ||| ||||| ||||||||| || | || | Sbjct 2297 GAATACCTTCCTTATCTTGGATTTTAGCTTTAACATTTTCTATAGTATCAGAGGCCTCCA 2356 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 | || || |||||||||||||| || | || || | ||| || |||||| Sbjct 2357 CCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 2406 >seq32346 Length=5591 Score = 116 bits (128), Expect = 7e-21 Identities = 138/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 39416 AGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGC 39475 ||| ||||| || ||||| ||| ||||||||| |||||||| ||| || ||| || Sbjct 3832 AGAGTACATCTCTGAATGAACATTTTCCATAGCAATTTGAAAACCATAGAAGCACCTGGC 3891 Query 39476 TTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATC 39535 ||| | ||||| || | || || || || || |||||| ||||||||||| Sbjct 3892 TTCAGTCACTTGAACCTCTTGTGAAAAACGCTCCACCAAGTTCTCATTAACAATACCATC 3951 Query 39536 AGATGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATT 39595 ||| || || ||||||||||| |||| || ||||||||||| ||| ||||||||| | Sbjct 3952 AGAAGCCGCAAAGAATGCTAAGACATGCTTGATAAAATGTTTCTCACAATCTTTTAATGT 4011 Query 39596 TTCCCAA 39602 |||||| Sbjct 4012 CTCCCAA 4018 Score = 113 bits (124), Expect = 8e-20 Identities = 161/223 (72%), Gaps = 4/223 (2%) Strand=Plus/Plus Query 39150 TCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTA 39209 || |||||||| |||| ||||||||| ||||| ||||| ||||| | |||| ||||| Sbjct 2981 TCATCCCTAGAAATAAGTTCATTACTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTC 3040 Query 39210 AGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCT 39269 | |||||||||||| ||||| || | || || ||||| ||||| || ||||| || Sbjct 3041 AACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAAAGCA 3100 Query 39270 ATTATTCTTGCTCCAAACATTAATTTATCAT-CT-AAAATCCAATTTATGGCCCAATCTG 39327 ||||| | | |||||| || | | || | || ||||| | || ||||| |||| Sbjct 3101 ATTATACGTTCTCCAA--ATGTAGCTGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTG 3158 Query 39328 CtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 39370 | || || || | | | |||| | |||| || || || ||||| Sbjct 3159 CCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAATAA 3201 Score = 84.2 bits (92), Expect = 4e-11 Identities = 114/156 (73%), Gaps = 10/156 (6%) Strand=Plus/Plus Query 38775 AATTAAAAACT-AGCATCTAAGGTAAAAATTGCATTATCACTA--TT----CATCACATT 38827 |||| |||| | ||||||||| || |||| |||| || || || |||||| Sbjct 888 AATTTAAAATTCAGCATCTAAAGTGAAAA---CATTGTCCATAGGTTGCGCCATCACTCC 944 Query 38828 GTATTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATAT 38887 | || |||||||| |||||| || || || || |||||||| ||||| ||||| || Sbjct 945 CCACTTCTGGTATTCTCCAACTTTCTTCTCAAAGAAATTTGTTTTGCCTTCCAATGAGAT 1004 Query 38888 TAAATTCATAAAATCAAATGGATTTTTGGTATTATA 38923 | |||||||||||| |||||||| | ||||| || Sbjct 1005 GAGATTCATAAAATCGAATGGATTCTGTGTATTGTA 1040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 902447587681200