Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq4347 129 7e-24 seq57358 102 1e-15 >seq4347 Length=347 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| |||||| ||| | || | ||||| |||||| | ||| | | || Sbjct 325 GCTTGGCCAACTCGCCGGGCAACAGGAGCCTCACGGAGGTCTGCACCTCCCTGGACGTGA 266 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 ||||| | |||||| |||| || || || ||||||| | |||| || |||| | Sbjct 265 TCGTGGACCTCTTGTTGTAGTGGGCGAGTCGCGACGCCTCGGCGGCGATACGCTCGAAAA 206 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||||||||||| ||||||| |||| ||||||| || ||| |||| Sbjct 205 TGTCGTTCACGAACGAGTTCATGATGGACATCGCCTTGCTGGAGATTCCGGTGTCCGGGT 146 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || || |||||||| ||||||||| Sbjct 145 GGACTTGTTTGAGCACTTTGTAGATG 120 >seq57358 Length=4629 Score = 102 bits (112), Expect = 1e-15 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 || || |||||| | | || || || |||| |||||| | || | || |||||| Sbjct 1087 GCGAGCTCGCCGGGAAGGAGGAGACGGACGGAGGTCTGCACTTCCCTCGACGTGATCGTT 1028 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 | |||||| |||||||||| ||| ||||||| ||||||| || | || ||| Sbjct 1027 GACCTCTTGTTGTAGTGCGCCAGGCGGGACGCCTCGGCCGCGATGCGTTCAAAAATATCG 968 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 |||||||| || ||||| | ||||| | ||| | ||||| || ||| ||||| ||| Sbjct 967 TTGACAAAGGAATTCATAATAGACATGGCCTTACTCGAGATCCCAGTGTCCGGGTGAACC 908 Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548 ||||| | ||| ||||| ||| Sbjct 907 TGCTTCAACACTTTGTAAATG 887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6087639482413638