Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq24004 352 3e-92 seq21383 226 3e-54 seq53127 149 6e-31 seq31223 147 2e-30 seq88586 143 2e-29 seq207359 136 4e-27 seq44559 134 1e-26 seq1324 84.2 2e-11 >seq24004 Length=11461 Score = 352 bits (390), Expect = 3e-92 Identities = 1166/1799 (65%), Gaps = 38/1799 (2%) Strand=Plus/Minus Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212 ||| ||||||||||||| || |||| || |||||||| || | | || |||||||| Sbjct 10006 TTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCC 9947 Query 138213 CGTTTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCG 138271 |||||||| |||||||| ||| |||| | || ||||| || ||| | || | | Sbjct 9946 TGTTTTTAATCCCATTTT-CCAAGCGTGGAAATGAATCGACGTAAGTTTTCCATAGTTAG 9888 Query 138272 GTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGG 138331 |||| || | | ||||||||| |||||||| || || || ||||| |||| |||| | Sbjct 9887 GTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTCTATCAGCTG 9828 Query 138332 CCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATAT 138391 |||| | || | |||| | |||||||| ||||| ||||| | ||| | || | Sbjct 9827 CCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTATTT 9768 Query 138392 GTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCA 138451 | || ||| || |||| | ||| || || ||| || || ||||| ||| Sbjct 9767 CTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAGATTTTTCA 9708 Query 138452 TGTCATCGTTGTACAGATTCAACTTGA-TCAAGTCGTTTATCAGATATCTGTTTATGACC 138510 | || || | ||| | ||| | || |||| || | | |||| ||| | || Sbjct 9707 TATCGTCATCCCACA-AATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGTTCACTACA 9649 Query 138511 TGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGAT 138570 ||||||| || | || |||| | |||||| || || || || ||||| ||| Sbjct 9648 GGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGAT 9589 Query 138571 TCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAA 138630 || |||| || ||||| || || || | || |||||||| || | ||| |||||| Sbjct 9588 TCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCAATAGAGAA 9529 Query 138631 TTCCGTAAACCGTGAAGCTTGAT-TCGTTCCTTGAGCGAC-GACCAGTCCCACAAATCGC 138688 || || ||||| || ||| | || || ||| | ||| | ||||||||| | || Sbjct 9528 TTGCGCAAACCATG--TTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAAAGGTCTG 9471 Query 138689 TAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGT 138748 |||| |||||| ||||||||| ||||| | || || ||||| ||||| |||| | Sbjct 9470 TAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGAT 9411 Query 138749 ACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGT 138808 | | |||| |||| | || || || || || || || | |||||||| | Sbjct 9410 ATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAAT 9351 Query 138809 AAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGC 138868 |||| ||||| || || |||||||| | | || | | || ||||| | || | Sbjct 9350 AAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGATATTC 9291 Query 138869 GGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCA 138928 | || | ||||| || |||| || || || || | || | ||| | ||| | || Sbjct 9290 TCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCA 9231 Query 138929 GATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAAT 138988 |||||| | |||||| | || ||||||| | || ||||| || | ||||||||||| Sbjct 9230 TATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAAT 9171 Query 138989 TTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGT 139048 || | || | ||| || | | |||||| || ||||| || | ||| | Sbjct 9170 TTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAAT------CTGTTAT 9117 Query 139049 CGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTT 139108 || ||||| |||| | || || || | ||||||||| ||||||| Sbjct 9116 ---------TTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTT 9066 Query 139109 CGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTA 139168 | || |||||| |||| || | || | ||| ||||| || || || || | Sbjct 9065 CATCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAA 9006 Query 139169 AATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAG 139228 ||||| |||||| || |||| |||||||||||| || || | ||| || ||||| |||| Sbjct 9005 GATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAG 8946 Query 139229 TTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGACGCACGT 139288 | |||||||| | |||||||| | || | || || |||| | ||| | | Sbjct 8945 TCTCCACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGACTTGTTTTA--T 8888 Query 139289 AAA--GTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTC 139346 ||| ||| || || || || | || |||||||| ||| || || || ||| Sbjct 8887 AAATCGTTTTTCTTCTTCATATTTGGCATATAGTTCGTCAAATTCCTCTCCAAAGCAGTC 8828 Query 139347 AGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCG 139406 || || | |||| | | |||||||||||| ||| || | | | | || | Sbjct 8827 AGCGAGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCT 8768 Query 139407 CCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTC 139466 |||| |||||||| || ||||| ||||| | | || || | || || | ||||| Sbjct 8767 TTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTC 8708 Query 139467 CGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAG 139526 | ||| |||| || | | | ||| ||||| | || || ||||| || || | Sbjct 8707 CTTACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATATCCGCATGCCAAGGCTCTAA 8648 Query 139527 ATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATT 139583 ||| || || | |||||| |||||| ||||||||||| || | || ||| ||| Sbjct 8647 ATAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATT 8588 Query 139584 ATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG-- 139641 || | || | |||||| ||| | ||||| | | || || |||| | ||| Sbjct 8587 GTTATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATGTA 8528 Query 139642 -GGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGA 139700 | || | |||||| || | |||| || | || || || || || |||| || Sbjct 8527 AGAACCCT---GAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGA 8471 Query 139701 TATTAAAACGCAATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGT 139760 ||||| | || | ||| || || | |||||| ||||| ||||| | ||| | Sbjct 8470 AATTAATGCACATTGTTTTAAAGTATCAAAGATACCTTCAATGCTATCGTCTTTCATAGC 8411 Query 139761 GACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACT 139820 | || || || || ||||| || || | ||| | || | ||||| ||||| || Sbjct 8410 TATAAGGAAACAGGAGGAAAGCTGTGGCCGCGGTGTGGCTGCGGAGAACAGTGTAGGGCT 8351 Query 139821 CGCGTGCGT-GAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATAT 139879 || || || || |||| | | ||||||| | || |||| ||| || || |||| | Sbjct 8350 TGCATGTGTAAAATATTTCTCT-GACATCATATTATAAGTTTTGATTGCACTATCAATGT 8292 Query 139880 CCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACC 139938 | || || || || | ||||||| ||| ||||| ||||| || ||| |||||| Sbjct 8291 CTTCACCATGAATGCCTATGGAGACTCTCATAAGCATGTGTTGAGGCCTTTCAGCCACC 8233 >seq21383 Length=8822 Score = 226 bits (250), Expect = 3e-54 Identities = 484/716 (68%), Gaps = 9/716 (1%) Strand=Plus/Minus Query 56458 TTGGACCAAGCGCCTTTGAAATCGTAATTCATCAAAAATATTTTGTCAAGATACGTTTGC 56517 || ||||| || || ||||| |||||| ||||||| || || | || | ||| |||| Sbjct 1803 TTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATTTTGA 1744 Query 56518 GCCTCGTCGTAATCGACGACGGCTATCTTATCGTATCCCGCGCTTATCGCGCTCGTGAGT 56577 || | | |||| || || || || ||||| |||| || || || || || | | Sbjct 1743 GCTTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGCACTAATAGCAGAAGTTAAT 1684 Query 56578 TGGAATTTACGACCCGTTTCGATCTCCAA-CTGGTCGAGCATATGTCTCAACTCCTTCAA 56636 | | |||| ||| | | | || | || || ||||| | | || || |||| Sbjct 1683 TCGTATTTCTTACCATTCTT-AGCTGAGAGCTCATCCAGCATCTCACGTAATTCTTTCAT 1625 Query 56637 CAGAATCACATAAGTCGACCCGTCGTGTGCTGGATCACCTAA--CAGGGGATTGGCGCCT 56694 || | | |||||| || || | || || | ||| | ||||| || || ||| Sbjct 1624 CAAACTTACATAACAATCACCATCTTCTG--GGCT-ACCGAGGTCAGGG--TTAGCACCT 1570 Query 56695 TTGCCACCCGGAAACTCCCAGTCGATGTCGACTCCATCGAAGAATTTCCACGTTAGTAGA 56754 |||||||| || |||||||| ||||| || || ||||||||||||||||| ||||| ||| Sbjct 1569 TTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAGA 1510 Query 56755 AACTCACGAACGGAATCGATGAATATTTGACGTTTCGTGTTGTCGTGTAAAAAGTAAAAC 56814 ||||| || || | | ||| | | || | ||||| ||||||| | || Sbjct 1509 AACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACTAAAAAGAAGAAA 1450 Query 56815 GGATCCGAGAGTGTCCAACCGCCTATCGACGGGAGCACTTTCAGATGCGGGTTCGCCTTT 56874 ||||| | || ||||| || || || || || || | |||| | ||| || | | Sbjct 1449 GGATCGGCAAGCGTCCACCCACCAATAGATGGAAGAATCTTCAATTCAGGGCGGGCTTGT 1390 Query 56875 TTGATAGCCATTATCTGCCCGAAATTGCCCTTGTACGGTTCGTTCCAAGCGGACACTCCT 56934 || | | ||||| || || || ||||| ||||| || |||||||| | |||| |||| Sbjct 1389 TTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCT 1330 Query 56935 TTTTGTGGTTTCTGTAGTGCGGCCCACGGATCGTGTATGGACACCTTGAAATCAGCACGA 56994 ||||||||||| |||| ||| ||||| |||||||| || || || ||||| || |||| Sbjct 1329 TTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGG 1270 Query 56995 TTCGAACACGAGCGTTGCAACGCTTCGAAACTACCCGTGATCGTTTTGAGACTATCGTTG 57054 ||| || || || | |||| |||||| || |||| ||| | |||||| ||| Sbjct 1269 CCGCTACAGGATCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACTATCATTG 1210 Query 57055 ATGCCGTCGCCGCCACAGATCGGTATGAAACCGTATAAGAGATGCGACAGATTGGGCACT 57114 |||||||| ||||| || || || || || ||||| | | ||| | ||||| || | Sbjct 1209 ATGCCGTCACCGCCGCAAATTGGAATAAAGCCGTAGAGCAAATGAGTAAGATTAGGTATA 1150 Query 57115 GGCACCTTGTCGGCTGCAAAATTCCTACCGTATACGCCCCATTCGACGAAATATGC 57170 || | || | | || |||||| || || |||||||| ||||| || || Sbjct 1149 GGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGGC 1094 >seq53127 Length=7988 Score = 149 bits (164), Expect = 6e-31 Identities = 164/216 (76%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || || || || |||||||| || | ||||| ||||| | Sbjct 6054 ATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTCT 6113 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||||| || || ||| || |||||||||||||| || ||||| || ||| Sbjct 6114 GATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCAA 6173 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882 || | | || ||||| || ||||||||||| || | || ||| ||||||||||||| Sbjct 6174 CAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGA-TGGACGTACACTGTCAGATTATAA 6232 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||||||||| || | ||||||||| |||| Sbjct 6233 TATTCAAAAGGAATCTACTTTGCACTTGGTGCTGCG 6268 >seq31223 Length=3647 Score = 147 bits (162), Expect = 2e-30 Identities = 165/218 (76%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || |||||||| ||||| | ||||| ||| | || Sbjct 729 ATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCTTCC 670 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| |||||| || || |||||||| ||||| || ||||| |||||| Sbjct 669 GATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 610 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTAT 24880 ||||||||||| || || || || || |||| || || || || | || || ||| Sbjct 609 CAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGA--CG-GACGCACTCTTTCTGACTAT 553 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || |||||||| ||||| || || |||||||| ||||| Sbjct 552 AATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCG 515 Score = 140 bits (154), Expect = 3e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| |||| || || || || ||||| || || | || ||||| | || Sbjct 501 ATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTCC 442 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || |||||||||||||||||| || || || || |||||| Sbjct 441 GACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 382 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || ||||| || ||||| ||||| ||| | | | || |||||||| Sbjct 381 CAGAGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAAT 322 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||||||||||||||||| ||||| || || ||||| Sbjct 321 ATTCAAAAGGAATCGACCCTACATTTAGTATTGCG 287 Score = 136 bits (150), Expect = 4e-27 Identities = 159/211 (75%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| ||||||| || || || ||||| ||||| | ||||| ||||| | Sbjct 273 ATGCAAATTTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 214 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || ||| || ||||||||||||||||| || ||||| |||||| Sbjct 213 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 154 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 |||||| | || ||||| || || || | || ||| ||| | || |||| || |||| Sbjct 153 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCG-TACAC-TGTCTGACTATA 96 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912 |||| ||||| ||||| || | ||||| || Sbjct 95 ACATCCAAAAAGAATCTACTTTGCACTTAGT 65 >seq88586 Length=4530 Score = 143 bits (158), Expect = 2e-29 Identities = 172/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||| || || | || || || || |||||||| ||||| ||||| || || ||| Sbjct 2408 ACAATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCC 2349 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | || || |||||| || ||| || |||||||| || ||||| || || || || Sbjct 2348 TCTGATACTATAGAAAATGTTAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGAC 2289 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTA 24879 || ||||||||||||||||| || ||||| || || ||| || |||| ||| || || Sbjct 2288 CAGCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATG-GACGTACATTGTCTGACTA 2230 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||||||||| ||| | || | ||| | ||| | |||||||| Sbjct 2229 CAACATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGG 2179 >seq207359 Length=487 Score = 136 bits (150), Expect = 4e-27 Identities = 159/211 (75%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| ||||||| || || || ||||| ||||| | ||||| ||||| | Sbjct 215 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 274 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || ||| || ||||||||||||||||| || ||||| |||||| Sbjct 275 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 334 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 |||||| | || ||||| || || || | || ||| ||| | || |||| || || | Sbjct 335 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCG-TACAC-TGTCTGACTACA 392 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912 |||| ||||| ||||| || | ||||| || Sbjct 393 ACATCCAAAAAGAATCTACTTTGCACTTAGT 423 Score = 129 bits (142), Expect = 5e-25 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 24718 TAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAAC 24777 ||| || || || || ||||| ||||| || || |||||| | ||||||| | |||| Sbjct 1 TAAGACTCTTACAGGAAAAACCATTACTCTTGAGGTAGAACCGTCCGACACTATCGAAAA 60 Query 24778 GGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTT 24837 || || |||||||||||||||||| || || || || |||||||| | |||| || Sbjct 61 TGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAACAGAGGCTGATTTT 120 Query 24838 TGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATC 24897 || || ||||| ||||| ||| | | | || |||||||| |||||||||||||| Sbjct 121 CGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAATATTCAAAAGGAATC 180 Query 24898 GACACTACACTTGGTGTTGCG 24918 || ||||| || || ||||| Sbjct 181 TACCCTACATTTAGTATTGCG 201 >seq44559 Length=2984 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || |||||||| || | ||||| ||| || | Sbjct 892 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 951 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || ||| ||||||||||||||||| || || || || |||||| Sbjct 952 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 1011 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || || || || || |||||||||||| | | | || || || || Sbjct 1012 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACTCTCTCTGACTACAAT 1071 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || || || || | |||||||| || || || || ||||| Sbjct 1072 ATTCAGAAAGAGTCCACTTTGCACTTGGTATTACGTTTACGAGGAGG 1118 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || ||||| || || ||||| || || || || || |||| | Sbjct 208 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAGGTGGA-GCCATC 266 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | |||| ||||| ||||| ||||| ||||| || || || || ||||| Sbjct 267 TGACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCA 326 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| | |||||||| || || ||||| || ||| | | | |||| || || || Sbjct 327 ACAACGTCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGTCGCACCCTGTCTGACTACAA 386 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| ||||| || || || || || || || |||| |||| || || Sbjct 387 CATCCAAAAAGAGTCTACCCTTCATTTAGTACTGCGTCTGCGAGGTGG 434 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || || ||||| || || | ||||| || | | Sbjct 664 ATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCTTCA 723 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || ||| ||||| ||||| || |||||||| ||||| |||||| Sbjct 724 GACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAA 783 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| || || || || ||||| ||| | | | |||| || || || Sbjct 784 CAACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACAAT 843 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || || || || || |||||||| | || | || ||||| Sbjct 844 ATCCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTCCGAGGAGG 890 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 |||||||||||| |||| || || || || || || || || | || || | ||||| | Sbjct 1120 ATGCAGATCTTTGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGT-GGAGCCATC 1178 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | |||| || || |||||||||||||| || || || || || || || Sbjct 1179 CGACACTATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCA 1238 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| ||| | |||||||| || |||||| | |||||| | | | || || ||||| Sbjct 1239 ACAGCGTCTCATCTTTGCTGGTAAACAGTTAGAGGATGGCCGCACTCTATCGGACTATAA 1298 Query 24883 CATTCAAAAGGAATCGAC 24900 ||| ||||| ||||| || Sbjct 1299 CATCCAAAAAGAATCTAC 1316 Score = 105 bits (116), Expect = 6e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 24725 CTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAA 24784 ||||| || || || ||||| || ||||| ||| || | || || | |||| |||||| Sbjct 1 CTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCTGATACTATTGAAAATGTAAAA 60 Query 24785 CAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGG 24844 || |||||||||||||| || || || || ||||| || ||| | |||||||| || Sbjct 61 GCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAGCAGCGTCTTATCTTTGCTGGT 120 Query 24845 AAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTA 24904 || || |||| ||| | | | |||| || || ||||| |||||||| || || || Sbjct 121 AAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAACATCCAAAAGGAGTCTACCCTT 180 Query 24905 CACTTGGTGTTGCGATTGCGCGGAGG 24930 || | || |||| |||| || || Sbjct 181 CATCTAGTACTGCGTCTGCGAGGTGG 206 >seq1324 Length=7229 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 24830 TTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAA 24889 |||||||||||||| ||||| |||| ||| ||| | | || || || ||||||||| Sbjct 865 TTGATCTTTGCCGGTAAACAATTGGAAGATGGCCGAACCCTCTCCGACTACAACATTCAA 806 Query 24890 AAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||||||||| ||| | ||| | || || || Sbjct 805 AAGGAATCCACACTACACTTAGTGCTCCGACTCCGAGGTGG 765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448561325395920