Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq53127 120 2e-22 seq88586 105 4e-18 seq44559 98.7 6e-16 seq31223 89.7 3e-13 >seq53127 Length=7988 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTG-AATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 |||| || ||||||| ||| |||||||| || | || | ||||||||||| || ||||| Sbjct 6510 TTCCACCTCTCAACCGCAGTACCAGGTGCAAAGTTGAT-TCCTTCTGAATATTGTAGTCA 6452 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 ||||| |||| |||| || || |||||||| || || || |||| |||||| ||| | Sbjct 6451 GATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGG 6392 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | ||||| || || | |||||| ||| || | | || | ||| || || Sbjct 6391 GGAATACCCTCTTTATCCTGAATTTTTGCTTTAACATTTTCAATTGTATCAGAAGCTTCC 6332 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | || || ||||| || || || ||||| ||||| || ||||| Sbjct 6331 ACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTAACAAAAATTTGCAT 6282 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 || || || ||||||| ||| || ||||| || |||||||| || | ||||| || Sbjct 7636 CTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTCTGACAATGTGCGCCCA 7577 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || |||||||||||||||||||| ||||||| ||| || ||| | || | || ||||| Sbjct 7576 TCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTA 7517 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || ||| || || | |||| | ||| || || || || | || || Sbjct 7516 TCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACCTCCAAAGTGATA 7457 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || || ||||||||||| || ||||| Sbjct 7456 GTTTTCCCAGTCAGCGTCTTTACAAAAATTTGCAT 7422 Score = 107 bits (118), Expect = 1e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| || |||||||| || || ||||| |||| |||| ||||||||||||||| Sbjct 5788 TCCTTCTGGATATTATAGTCTGACAGTGTGCGCCCATCTTCCAATTGCTTTCCGGCGAAA 5729 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || |||| ||| || ||| | || | || |||||||| | || ||| || ||| | Sbjct 5728 ATTAGTCTTTGTTGATCTGGAGGGATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTT 5669 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| || || || || | || ||||| || || || | || ||||| Sbjct 5668 TCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACG 5609 Query 34967 AAGATCTGCATGAT 34980 ||||| |||||||| Sbjct 5608 AAGATTTGCATGAT 5595 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || ||||||||||| | |||| |||| |||||||||||||| ||||| Sbjct 7385 CTCCTTCTGGATATTATAGTCCGACAATGTGCGTCCATCTTCCAGTTGCTTTCCAGCGAA 7326 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||||| ||| || ||| | || | || ||||| || | || ||| || || Sbjct 7325 AATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTATCTTGAATCTTTGCCTTAACATT 7266 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| | ||| || || || || | || || || || || || || |||||||| Sbjct 7265 TTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTAC 7206 Query 34966 AAAGATCTGCAT 34977 ||| || ||||| Sbjct 7205 AAAAATTTGCAT 7194 Score = 98.7 bits (108), Expect = 6e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || |||| || || || ||||| | || || ||||||||||| || || | Sbjct 6054 TTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAG 5995 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 |||| |||| |||| || || |||||||| || || || |||| |||||| ||| | | Sbjct 5994 ATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 5935 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| || || | |||||| ||| || | | || | ||| | ||| | Sbjct 5934 GAATTCCCTCTTTATCCTGAATTTTTGCTTTAACATTTTCAATTGTATCAGAAGGCTCAA 5875 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || ||||| || || || |||||||| || || ||||| Sbjct 5874 CTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCAT 5826 Score = 98.7 bits (108), Expect = 6e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || |||| || ||| ||||| || | || ||||||||||| || ||||| | Sbjct 6738 TTCCACCTCTCAGCCGCAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAG 6679 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 |||| |||| |||| || || |||||||| || || || |||| |||||| ||| | | Sbjct 6678 ATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 6619 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928 | | ||||| || || | ||||| || || | | || | ||| || || | Sbjct 6618 GAATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 6559 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | || || || || || || || ||||||||||| || ||||| Sbjct 6558 CTTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 6510 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || |||||||| || | |||| |||| |||||||||||||||||||| Sbjct 7157 CTCCTTCTGGATATTATAGTCTGACAATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAA 7098 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||||| ||| |||||| | || | || |||||||| | || ||| || || Sbjct 7097 AATCAGTCTTTGTTGGTCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATT 7038 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| | ||| || || || || | || || || || || || | || || || Sbjct 7037 TTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAATGTTTTCAC 6978 Query 34966 AAAGATCTGCAT 34977 ||| || ||||| Sbjct 6977 AAAAATTTGCAT 6966 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || |||||||| || ||||| ||||| | || |||| || || |||||||| || || Sbjct 6928 TCTTTCTGAATATTGTAGTCAGATAGTGTACGTCCATCCTCAAGCTGCTTTCCAGCAAAA 6869 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || | ||| |||||| | || | || ||||| || | ||||| || || | Sbjct 6868 ATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTATCTTGAATTTTCGCCTTAACATTT 6809 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| || ||| || || | || || ||||| || || || ||||||||| Sbjct 6808 TCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTTACA 6749 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 6748 AATATTTGCAT 6738 >seq88586 Length=4530 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| |||||||| ||||| || | | || |||| || ||||| || || || ||| Sbjct 2215 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 2274 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| |||||||||||| | || | || ||||| || | ||||| ||| || | Sbjct 2275 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTAACATTT 2334 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 |||| | ||| |||||| || || | ||| ||||| || ||||| |||||||| || Sbjct 2335 TCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 2394 Query 34967 AAGATCTGCAT 34977 || || ||||| Sbjct 2395 AAAATTTGCAT 2405 >seq44559 Length=2984 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| |||| ||| ||||| || || ||||| || ||| |||| |||| Sbjct 875 AGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCT 816 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||||||||| || |||||||| || ||||| || ||| | || | || ||||| || Sbjct 815 TCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCT 756 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||| || | | || | || | ||| || || | ||||| || Sbjct 755 TGAATCTTAGCTTTAACATTTTCAATGGTGTCTGAAGGCTCAACTTCCAAAGTTATTGTT 696 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || || || ||||| || ||||| Sbjct 695 TTTCCAGTAAGTGTTTTGACAAATATTTGCAT 664 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || || |||| ||| |||||| || ||||| ||||| || ||| |||| |||| Sbjct 192 CAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGACAGGGTGCGACCATC 133 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| |||||| || || ||||| || || ||||| || | || | ||||| ||||| Sbjct 132 TTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTC 73 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | ||||| ||| || | | || | ||| || || || || | ||| ||||| Sbjct 72 TTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGGGTAATGGT 13 Query 34945 CTTTCCCGTGAG 34956 |||||| || || Sbjct 12 CTTTCCAGTTAG 1 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||| | ||| ||| |||||||| || ||||| || || | || |||| ||| Sbjct 1100 ACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGGCCATCCTCC 1041 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| || ||||| || || ||||| || ||| | || | ||||| ||||| | Sbjct 1040 AGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGG 981 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || ||| || | | || | || || || || || | || || || || Sbjct 980 ATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTC 921 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || |||||||||||||||||||| Sbjct 920 CCTGTCAGTGTCTTTACAAAGATCTGCAT 892 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| |||||||| || || || || | |||| |||| |||| ||||||||| || || Sbjct 627 CTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCTTCCAATTGCTTTCCAGCAAA 568 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 || || || || |||||| | || | |||||||| || | |||||| |||||| | Sbjct 567 AATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGTATTTTAGCTTTGAC--A 510 Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | || || | ||| | || || || | ||| ||||||||||| || | || || Sbjct 509 TTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTG 450 Query 34964 ACAAAGATCTGCAT 34977 ||||| || ||||| Sbjct 449 ACAAATATTTGCAT 436 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || || ||||||||||||||||| |||| |||| || | || || || || ||| Sbjct 1310 TCTTTTTGGATGTTATAGTCCGATAGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAAG 1251 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || || || |||||| | || | ||||||||||| | || || || || | Sbjct 1250 ATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTAGCCTTAACATTT 1191 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || | ||| || || | || |||||||| || || || ||||| ||| Sbjct 1190 TCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACA 1131 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 1130 AAGATCTGCAT 1120 >seq31223 Length=3647 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| || || || ||||| |||||||| || || |||| | || ||| Sbjct 521 ACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTCTTCC 580 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 | ||||||||| ||||| |||| ||||| || ||| | || | || |||||||| | Sbjct 581 AATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGA 640 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 ||||| ||| || | | || | || | || || || | || ||||| || Sbjct 641 ATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTTTTA 700 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || || |||||||||||||| Sbjct 701 CCCGTAAGTGTTTTCACAAAGATCTGCAT 729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324749619503066