Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq45806 255 5e-63
seq21383 176 4e-39
seq53127 114 1e-20
seq88586 89.7 4e-13
>seq45806
Length=6479
Score = 255 bits (282), Expect = 5e-63
Identities = 373/520 (72%), Gaps = 22/520 (4%)
Strand=Plus/Plus
Query 103568 AACGGGTTCTTCTACTTGGGCCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAG 103627
|| || |||| || ||||||||||||| ||||| |||||||||||||| ||||| ||
Sbjct 4832 AATGGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 4891
Query 103628 ATTATGCGCTGGGAGGAGGGCGACGACCCGGCTCGCGATCATCAGAGGTGGGCGCCGCAG 103687
|||||| |||| | ||||||||| || || || || ||| | |||||||| |||
Sbjct 4892 ATTATGAAATGGGTTGCGGGCGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCTCAG 4951
Query 103688 TGTCCGTTCCTGaaaaaaaCGGCTG---CTGGC---GCGCTGCCCG---CCG-GCCTTGC 103737
|| || ||| || ||| | ||||| | || || || ||| ||| | |
Sbjct 4952 TGCCCTTTCTTGCGGCGGCAGGCGGAATCTGGCAACGTGCCGCGCGAGCCCGCGCCCT-C 5010
Query 103738 GATGG-AC-----GGGCAGGACGAGTGCGGCGTGAGCGCGCTGCCGTCCACCAACGCCTG 103791
| ||| || || || ||||||||||||||| |||||| ||| || | ||| |
Sbjct 5011 GCTGGCACCCGCTGGCCACGACGAGTGCGGCGTGCGCGCGCCCCCGCCCGC----GCCGG 5066
Query 103792 CGTGC-GCATGCCCGGCCCCGCGCACCCTCGGTTCGCCTCCGAGGCCTCAAGGTTACAAA 103850
|| | |||||||||| |||| |||| | || | |||||||||||| | | | | |
Sbjct 5067 CGCCCCGCATGCCCGGTCCCGTGCACGCGCGCTACGCCTCCGAGGCGGCCCGCCTGCGCA 5126
Query 103851 CTTTTAAGGATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGAT 103910
|| | || ||||| || ||| |||| ||||| || ||| | | |||||||| ||||
Sbjct 5127 GCTTCAGCGACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCCGAAGCGGGAT 5186
Query 103911 TCTACTACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGG 103970
||| |||||||||||| | ||||| || || ||||||||||| ||||| || || ||||
Sbjct 5187 TCTTCTACACCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGCGGACTCAAGG 5246
Query 103971 ATTGGGAGCACGATGATGAGCCGTGGCAACAACACGCGCTTTTCTTTCGCCGTTGCGCAT 104030
| |||||| |||| || | ||||||| | || ||||||| | || ||| ||||| |
Sbjct 5247 ACTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGTGCGCCT 5306
Query 104031 ACGTGCTACTTGTCAAGGGCCACGATTATGTACAAAAGGT 104070
|||||| || ||||| |||| || || || || |||||
Sbjct 5307 ACGTGCAGCTGGTCAAAGGCCGAGAGTACGTCCAGAAGGT 5346
>seq21383
Length=8822
Score = 176 bits (194), Expect = 4e-39
Identities = 641/992 (65%), Gaps = 31/992 (3%)
Strand=Plus/Plus
Query 29072 TGCGTATTTTGTAGAATGGGGCGTATATGGCCGCAACTTTCCGGTAGACAAAGTGCCGCT 29131
||| || || ||||||||||| || ||| | || || || || || | || |
Sbjct 1093 TGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTAT 1152
Query 29132 GCCCAACCTCTCGCATCTGTTGTACGGTTTCATACCTATTTGCGGCGGCGACGGGCTCAA 29191
|| || || | ||| || | ||||| || || || ||||||||||| ||||| ||||
Sbjct 1153 ACCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAA 1212
Query 29192 CGACGCCCTCAAAACCATTCCCGGCAGTTTTGAGGCGCTGCAACGCTCTTGCAAGGGCCG 29251
|| | ||| || |||||||| | || || || || || || | |||||
Sbjct 1213 TGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGATCCTGTAGCGGCCG 1272
Query 29252 TTCAGATTTCAAAGTCGCTATTCACGATCCGTGGGCCGCGATACAAAAACCGCAAAAGGG 29311
| || ||||||||| | || |||||||| ||||| || |||||||||| ||||| ||
Sbjct 1273 TGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGG 1332
Query 29312 CGTGTCTGCGTGGAACGAGCCCTACAAAGGAAACTTCGGTCAGCTAATGGCGGCCAAGCT 29371
||||| | |||||||||||||||||||| ||||| || || ||||| | || |
Sbjct 1333 ATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACA 1392
Query 29372 GGCCAATCCGCACCTCAAAATTCTGCCGTCCATCGGCGGCTGGACATTGTCCGACCC--- 29428
||| || | | || ||||| || || || || || ||||| | |||| ||
Sbjct 1393 AGCCCGCCCTGAATTGAAGATTCTTCCATCTATTGGTGGGTGGACGCTTGCCGATCCTTT 1452
Query 29429 GTTCTATTTCATGCACGACGCGGAAAAACGGCGTGTGTTTGTGGACTCGGTCAGAGAATT 29488
|||| ||| | || | | | | | || |||||| | || || | || ||
Sbjct 1453 CTTCTTTTTAGTTGACAAATCTAAGAGAACACG---ATTTGTGCAGTCAGTAAAGGAGTT 1509
Query 29489 TCTGCAGGTGTGGAAGTTTTTTGACGGCGTGGACATAGACTGGGAGTTTCCGGGTGGCAA 29548
||| | ||||| || || || || || || || || |||||||| || ||||||||
Sbjct 1510 TCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAA 1569
Query 29549 AGGCGCCAACCC-GACACTTGGCAACGGGGAGCGCGACGCCGACACGTATAACATTTTAC 29607
||| || ||||| ||| || || | | || || | || ||| | |||
Sbjct 1570 AGGTGCTAACCCTGAC-CTCGGTAGCCCAGA---AGATGGTGATTGTTATGTAAGTTTGA 1625
Query 29608 TAAAGGAATTGCGCGCAATGATGGACGAGTTACAATTGCAAACGGGCAAAACGTACGAGT 29667
| || ||||| || | ||| |||| ||| | | | | || || | ||||| |
Sbjct 1626 TGAAAGAATTACGTGAGATGCTGGATGAGCTCTCAGCTAAGAATGGTAAGAAATACGAAT 1685
Query 29668 TGACAAGCGCAATCAGTTCCGGACATGACAAGATTGCTGTAGTTAAATACGACGCTGCGC 29727
| || || || ||| | ||| || || || || ||| | |||| | || |
Sbjct 1686 TAACTTCTGCTATTAGTGCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAAGCTC 1745
Query 29728 AAAAGTTTCTCGATAAAATATTCCTCATGAGCTACGATTTTAAAGGCGCGTGGTCAAACA 29787
|||| | | | ||| | || ||| | ||||| ||||| || || || || ||||||||
Sbjct 1746 AAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTCAAA-- 1803
Query 29788 CCGAT----TTGGGCTACCAAACTACTCTCTACGCGCCGAGTTGGAACCCAAACGAACTG 29843
||| |||| | | ||||| | | |||||||| ||||| || || |||
Sbjct 1804 -TGATACTCTTGGAC-ATCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAAACT 1861
Query 29844 TACAACACGGACCACGCCGTTA---AGTTGCTCACGAACCAGGGCGTGGACCCGCGCAAA 29900
|||| | ||| | || | | ||||| || ||||| ||| | || ||
Sbjct 1862 TACACATCTGACTTTGGAGTAAAATACTTGCTGGCG---CAGGGAGTGAATCCTAAGAAG 1918
Query 29901 ATTATTGTGGGCGTCGCCATGTACGGCCGCGGTTGGACAGGCGTGTCGGGTTATGACGGT 29960
||| | || || || || ||||| || || |||||||| ||||| || | || ||
Sbjct 1919 ATTGTAGTAGGTGTTGCTATGTATGGTCGTGGTTGGACTGGCGT-TC--ATGATTACAAA 1975
Query 29961 GACAACTAT---TTTACGGGCACAGCTGCTGGGCCCGTGACCGGCACTTGGGAAGACGGC 30017
|||||| | || || |||| ||| |||| || || | || |||||| |||||||
Sbjct 1976 GACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGGA 2035
Query 30018 GTTGTCGACTATCGCCAAATTGAAAACGAAAT 30049
|| || |||||| | | |||| || |||||
Sbjct 2036 GTGGTTGACTATAGGGAGATTGCGAATGAAAT 2067
>seq53127
Length=7988
Score = 114 bits (126), Expect = 1e-20
Identities = 177/252 (70%), Gaps = 12/252 (5%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||||||||| || || | || ||||| || || || | ||| ||| |||
Sbjct 6281 AATGCAAATTTTTGTTAAGACACTGACTGGCAAGACTATCACTTTGGAAGTGGAAGCTTC 6340
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| | | | || ||| ||| ||| |||||||| || | ||| |||||
Sbjct 6341 TGATACAATTGAAAATGTTAAAGCAAAAATTCAGGATAAAGAGGGTATTCCCCCAGATCA 6400
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACT 107730
||| |||||||||| ||| || || ||||| || |||||| ||| | | ||||
Sbjct 6401 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGC----ACACTATCTGACT 6456
Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATA 107790
|||| ||||| ||||| || || |||||| |||| || | ||| |||| || |||
Sbjct 6457 ACAATATTCAGAAGGAATCAACTTTGCACCTGGTACTGCGGTTGAGAGGTGG----AATG 6512
Query 107791 AAAATATTTGTA 107802
|||||||||||
Sbjct 6513 CAAATATTTGTA 6524
Score = 102 bits (112), Expect = 6e-17
Identities = 151/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||| ||||| || || | || |||||||| || || | ||| ||| |||
Sbjct 6053 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTC 6112
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| | | | || || ||| ||| || ||||||||| | || || ||
Sbjct 6113 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCA 6172
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||||| ||||||| ||| || ||||||||||| || | ||| || | || || ||
Sbjct 6173 ACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATAA 6232
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768
||||||||||| ||||| |||||| ||||| ||
Sbjct 6233 TATTCAAAAGGAATCTACTTTGCACTTGGTGCTG 6266
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| || || ||||||||||| || |||||||| || | ||| ||| |||
Sbjct 5598 ATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCT 5657
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | ||||| ||||||| || || |||||| | || |||||
Sbjct 5658 GATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATCCCTCCAGATCAA 5717
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| ||||| |||| || || || || |||| || | ||| || | ||||| ||
Sbjct 5718 CAAAGACTAATTTTCGCCGGAAAGCAATTGGAAGATGGGCGCACACTGTCAGACTATAAT 5777
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768
|| || ||||| ||||| |||||| | || |||
Sbjct 5778 ATCCAGAAGGAATCTACTTTGCACTTAGTTTTG 5810
Score = 93.3 bits (102), Expect = 3e-14
Identities = 169/246 (69%), Gaps = 10/246 (4%)
Strand=Plus/Plus
Query 107543 TAAGAGGTTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGA 107602
|||||||| || ||||||||||||| || || | || || ||||| || || | ||
Sbjct 7183 TAAGAGGTGGAA--TGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGA 7240
Query 107603 AACGGAGGCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGT 107662
| ||| ||| ||||| | | | || || ||||||| ||||| |||||| |
Sbjct 7241 AGTGGAAGCTTCTGATACAATAGAAAATGTTAAGGCAAAGATTCAAGATAAGGAAGGCAT 7300
Query 107663 GCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAA 107718
|| ||||| || ||||| |||| || || || || ||||| |||||| |
Sbjct 7301 TCCTCCAGATCAACAAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGACGC----A 7356
Query 107719 CAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAG 107778
|| || ||||||| || || || ||||||||||| ||||| | || ||| | | |||
Sbjct 7357 CATTGTCGGACTATAATATCCAGAAGGAGTCTACTTTGCATTTAGTTTTGCGTCTAAGAG 7416
Query 107779 GGGGAA 107784
| ||||
Sbjct 7417 GTGGAA 7422
Score = 91.5 bits (100), Expect = 1e-13
Identities = 172/252 (68%), Gaps = 12/252 (5%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||||||||| || || || | || ||||| || || || | ||| ||| ||
Sbjct 5825 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTC 5884
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||||| | | | || ||| ||| ||| |||||||| || | ||| |||||
Sbjct 5885 TGATACAATTGAAAATGTTAAAGCAAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 5944
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACT 107730
||| |||||||||| ||| || || ||||| || |||||| ||| | | || |
Sbjct 5945 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGC----ACACTATCTGATT 6000
Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATA 107790
|||||||||| || || ||||| |||||| | || | | || |||| || |||
Sbjct 6001 ACAACATTCAGAAAGAATCTACTTTGCACCTAGTACTACGGCTGAGAGGTGG----AATG 6056
Query 107791 AAAATATTTGTA 107802
|||||||||||
Sbjct 6057 CAAATATTTGTA 6068
Score = 86.0 bits (94), Expect = 5e-12
Identities = 159/233 (68%), Gaps = 8/233 (3%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||||||||| ||||| || || || ||||| || || | ||| ||| |||
Sbjct 6966 ATGCAAATTTTTGTGAAAACATTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCT 7025
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | || || ||||||| || || |||||| | || || ||
Sbjct 7026 GATACAATAGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCAA 7085
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACTA 107731
|| ||||| |||| || || || || ||||| |||||| ||| || | |||||
Sbjct 7086 CAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGACGC----ACATTGTCAGACTA 7141
Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
|| || || ||||||||||| ||||| | || ||| | | |||| ||||
Sbjct 7142 TAATATCCAGAAGGAGTCTACTTTGCATTTAGTTTTGCGTCTAAGAGGTGGAA 7194
>seq88586
Length=4530
Score = 89.7 bits (98), Expect = 4e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||||||||| ||||| || | || || |||||||||||| |||| ||||||
Sbjct 2406 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTC 2347
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|||||| | | | || ||| || || ||||| ||||| | || || ||
Sbjct 2346 TGATACTATAGAAAATGTTAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCA 2287
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||| | | || | ||| |||||||| || || || | ||| || | ||||||||
Sbjct 2286 GCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAA 2227
Query 107735 CATTCAAAAGGAGTCTACGTTGCA 107758
|||||||||||| || || |||||
Sbjct 2226 CATTCAAAAGGAATCCACATTGCA 2203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397721684448046
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