Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq31223 163 4e-35 seq207359 159 5e-34 seq53127 120 5e-22 seq44559 114 2e-20 >seq31223 Length=3647 Score = 163 bits (180), Expect = 4e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | || ||||||||||||||| | || || ||| | | Sbjct 272 TGCAAATTTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCTG 213 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| ||| |||||| ||| |||||||||||||| || ||||||| Sbjct 212 ACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAAC 153 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| || || |||||||| ||| | | || | | || ||||| | Sbjct 152 AACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTATAACA 93 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| ||| | || |||||| | || |||||||| |||| Sbjct 92 TCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGGTA 45 Score = 129 bits (142), Expect = 9e-25 Identities = 157/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | |||||| | || || ||||| |||||| | || || |||| | || Sbjct 728 TGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCTTCCG 669 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||||||| ||||| ||| || ||||||||||| || ||||||| Sbjct 668 ATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGATCAAC 609 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | ||||| || || || ||||| || || | || | | || ||||||| Sbjct 608 AACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTATAATA 549 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| ||| | || || ||||| || Sbjct 548 TTCAAAAAGAATCTACTCTTCACTTGGTATTGCG 515 Score = 125 bits (138), Expect = 1e-23 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || | ||||||||||| || ||| | || ||||| | || Sbjct 500 TGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTCCG 441 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| ||||||| || || || ||| ||||| || ||||| || ||||||| Sbjct 440 ACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAAC 381 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || |||||||| || |||||| | || ||| | || ||| | |||||||||| Sbjct 380 AGAGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAATA 321 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||| |||||||| | ||||||||||| || Sbjct 320 TTCAAAAGGAATCGACCCTACATTTAGTATTGCG 287 >seq207359 Length=487 Score = 159 bits (176), Expect = 5e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | || ||||||||||||||| | || || ||| | | Sbjct 216 TGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCTG 275 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| ||| |||||| ||| |||||||||||||| || ||||||| Sbjct 276 ACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAAC 335 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| || || |||||||| ||| | | || | | || || || | Sbjct 336 AACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACAACA 395 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | ||||||||||| ||| | || |||||| | || |||||||| |||| Sbjct 396 TCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGGTA 443 Score = 129 bits (142), Expect = 9e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 146055 ACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAAAAT 146114 ||||||||||| |||||| |||| ||||||| ||| ||||| ||||||| || Sbjct 11 ACAGGAAAAACCATTACTCTTGAGGTAGAACCGTCCGACACTATCGAAAATGTGAAGGCA 70 Query 146115 AAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAA 146174 || || ||| ||||| || ||||| || |||||||| || || ||||| || || ||| Sbjct 71 AAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAACAGAGGCTGATTTTCGCTGGAAAA 130 Query 146175 CAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCAT 146234 ||| | || ||| | || ||| | ||||||||||| ||||| ||||| || | ||| Sbjct 131 CAACTGGAAGATGGCCGTACATTATCTGATTATAATATTCAAAAGGAATCTACCCTACAT 190 Query 146235 TTAGTATTACG 146245 |||||||| || Sbjct 191 TTAGTATTGCG 201 >seq53127 Length=7988 Score = 120 bits (132), Expect = 5e-22 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| ||||||| ||||| || ||||| || || | || || ||| | | Sbjct 5599 TGCAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCTG 5658 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || |||| ||||| || || ||| || |||||||| || || ||||||| Sbjct 5659 ATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATCCCTCCAGATCAAC 5718 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| ||||| || || || ||||| || ||| | || | |||| ||||||| Sbjct 5719 AAAGACTAATTTTCGCCGGAAAGCAATTGGAAGATGGGCGCACACTGTCAGACTATAATA 5778 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || || ||||| ||| | || ||||| || || |||| || || Sbjct 5779 TCCAGAAGGAATCTACTTTGCACTTAGTTTTGCGTCTAAGGGGTGG 5824 Score = 120 bits (132), Expect = 5e-22 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||||| || || ||||| || ||| | || || ||| | | Sbjct 6967 TGCAAATTTTTGTGAAAACATTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCTG 7026 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||| || || || ||| || ||||||||||| || || |||| Sbjct 7027 ATACAATAGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCAAC 7086 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| ||||| || || || ||| | || ||| | || || |||| ||||||| Sbjct 7087 AAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACATTGTCAGACTATAATA 7146 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || || || || ||| | |||||||| || || ||||||| || Sbjct 7147 TCCAGAAGGAGTCTACTTTGCATTTAGTTTTGCGTCTAAGAGGTGG 7192 Score = 120 bits (132), Expect = 5e-22 Identities = 162/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || |||| ||| | || || ||||| || ||| | || || ||| | | Sbjct 7195 TGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCTG 7254 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||| || || || ||| ||| ||||||||||| || ||||||| Sbjct 7255 ATACAATAGAAAATGTTAAGGCAAAGATTCAAGATAAGGAAGGCATTCCTCCAGATCAAC 7314 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| ||||| || || || ||| | || ||| | || || | || ||||||| Sbjct 7315 AAAGACTGATTTTCGCTGGAAAGCAACTGGAAGATGGACGCACATTGTCGGACTATAATA 7374 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || || || || ||| | |||||||| || || ||||||| || Sbjct 7375 TCCAGAAGGAGTCTACTTTGCATTTAGTTTTGCGTCTAAGAGGTGG 7420 Score = 114 bits (126), Expect = 2e-20 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| |||| ||| | || || ||||| || || | || || ||| | | Sbjct 6055 TGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTCTG 6114 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||| || ||||| ||| |||||||||||||| || || |||| Sbjct 6115 ATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCAAC 6174 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || ||||||||||| ||||| | || ||| | || | |||||||||||| Sbjct 6175 AGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATAATA 6234 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||| ||||| ||| | || || || Sbjct 6235 TTCAAAAGGAATCTACTTTGCACTTGGT 6262 Score = 105 bits (116), Expect = 1e-17 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || |||| || | || || ||||| || ||| | || || ||| | | Sbjct 7423 TGCAAATTTTTGTAAAGACGCTGACTGGGAAAACTATCACTTTGGAGGTGGAAGCTTCTG 7482 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||| || || || ||| ||| ||||||||||| || ||||||| Sbjct 7483 ATACAATAGAAAATGTTAAGGCAAAGATTCAAGATAAGGAAGGCATTCCTCCAGATCAAC 7542 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| ||||| || || || ||| | || ||| | || || |||| ||||||| Sbjct 7543 AAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAATA 7602 Query 146212 TACAAAAAGAATCGAC 146227 | || |||||||| || Sbjct 7603 TCCAGAAAGAATCTAC 7618 Score = 102 bits (112), Expect = 1e-16 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| |||| ||| | || || || || || || | || || || | | Sbjct 6739 TGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTCTG 6798 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || ||||||| || ||||| ||| ||| ||||||||||| || || |||| Sbjct 6799 ACACAATCGAAAATGTTAAGGCGAAAATTCAAGATAAGGAAGGCATTCCTCCAGACCAAC 6858 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 |||| || |||||||| || || || | || ||| | || || | || || |||| Sbjct 6859 AAAGGCTTATTTTTGCTGGAAAGCAGCTTGAGGATGGACGTACACTATCTGACTACAATA 6918 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || |||||||| ||| | ||||||||| | || | ||||| || Sbjct 6919 TTCAGAAAGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 6964 >seq44559 Length=2984 Score = 114 bits (126), Expect = 2e-20 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | |||||||| || ||||| || ||||| | || ||||||| | Sbjct 437 TGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCTG 496 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | ||||| ||| ||||||||| ||| || ||||| || || || |||| Sbjct 497 ACACAATCGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAAC 556 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | ||||||||||| || || ||||| || ||| | | || || | ||||| |||| Sbjct 557 AGCGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAATA 616 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || ||||| || || | || ||||| Sbjct 617 TTCAGAAAGAGTCAACCCTGCACTTAGT 644 Score = 109 bits (120), Expect = 9e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | |||||| | || ||||||||||| ||| | || || || | | | Sbjct 665 TGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCTTCAG 724 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| ||||||| ||| ||| || ||| ||| ||||| ||||| || ||||||| Sbjct 725 ACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAAC 784 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || || || || ||||| ||| | || ||| | || | | || || |||| Sbjct 785 AACGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACAATA 844 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || ||||| || || | || || ||| | || | ||||||||| Sbjct 845 TCCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTCCGAGGAGGTA 892 Score = 107 bits (118), Expect = 3e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 146053 TAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAATGTAAAAA 146112 |||| ||||| || ||||| | || || |||| ||||||||| ||||||||||| Sbjct 2 TAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCTGATACTATTGAAAATGTAAAAG 61 Query 146113 ATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTA 146172 |||||| ||| ||||| ||||| ||||| ||||| || | || || ||||| |||| Sbjct 62 CTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAGCAGCGTCTTATCTTTGCTGGTA 121 Query 146173 AACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCC 146232 | ||||| || ||| | | || | | || || || || ||||| || || || | | Sbjct 122 AGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAACATCCAAAAGGAGTCTACCCTTC 181 Query 146233 ATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269 || ||||| | || | |||| |||| ||||||| Sbjct 182 ATCTAGTACTGCGTCTGCGAGGTGGTATGCAAATATT 218 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || || | || || || || || ||| | || || || | || Sbjct 1121 TGCAGATCTTTGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTGGAGCCATCCG 1180 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| ||||||| || ||| || ||| || || |||||||| || || |||| Sbjct 1181 ACACTATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAAC 1240 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | ||||| ||||| |||||||| ||||| ||| | || || | || ||||| | Sbjct 1241 AGCGTCTCATCTTTGCTGGTAAACAGTTAGAGGATGGCCGCACTCTATCGGACTATAACA 1300 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA 146240 | ||||||||||| ||| | ||||||||| Sbjct 1301 TCCAAAAAGAATCTACTTTGCATTTAGTA 1329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783831348212880