Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq20520 98.7 1e-15 >seq20520 Length=7881 Score = 98.7 bits (108), Expect = 1e-15 Identities = 80/97 (82%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 201146 TGGTATTAATGCAATTGTAGCAATTGCATGTTACACTGGATACAATCAAGAAGATAGTGT 201205 |||||| ||| | ||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 4830 TGGTATCAATTCTATTGTTGCAATTTTATGTTACACTGGATACAATCAAGAAGATAGTGT 4889 Query 201206 TATTCTTAATAAAGCATCTATTGAAAGAGGTTTATTC 201242 ||| | ||| || || |||||||||| || ||| Sbjct 4890 CATTTTAAATGCTTCAGCTGTTGAAAGAGGATTCTTC 4926 Score = 86.0 bits (94), Expect = 8e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 201565 TACGTATACCAGAAATTGGAGATAAATTTTGTTCTGGAATGGCCCAAAAAGGAACTTGTG 201624 ||||||| ||| ||||||||||||| ||| |||| | | ||||||||||| |||| Sbjct 5285 TACGTATTCCACAAATTGGAGATAAGTTTGCTTCTCGTCACGGTCAAAAAGGAACCTGTG 5344 Query 201625 GTATGATTTATGCACAAGAAGATATGCCGTTTACACAATCGGGTATGACCCCGGATATTA 201684 | || ||| |||||||||||||||||||||| ||| | || || ||||| | Sbjct 5345 GAATCCAGTATCGACAAGAAGATATGCCGTTTACATGCGAGGGCTTAACACCAGATATCA 5404 Query 201685 TAATCAATCC 201694 | || ||||| Sbjct 5405 TTATTAATCC 5414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 653333703726000