Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq18229 96.9 6e-15
seq53127 91.5 3e-13
>seq18229
Length=13825
Score = 96.9 bits (106), Expect = 6e-15
Identities = 108/143 (76%), Gaps = 6/143 (4%)
Strand=Plus/Minus
Query 182419 CAGGTAGACGCTCACAATATAGTACCTTGTTGGGAAGCTTCTGACAAAGAAGAATACGGT 182478
|||||||| ||||||||| | || || ||||||| |||||||| ||| | |||||
Sbjct 5438 CAGGTAGATGCTCACAATGTGGTGCCATGTTGGGTGGCTTCTGATAAACAGGAATATTCA 5379
Query 182479 GCAAGAACTTTAAGAAAAAAGATATTTGATAAGTTATATGAATATATGACAGAATTTCCT 182538
|||||||| ||||||| || || | ||| ||| |||||||| | ||||||||||||
Sbjct 5378 GCAAGAACAATAAGAAATAAAATCAATTCTAAATTAGATGAATATCTCACAGAATTTCCT 5319
Query 182539 ---GTTATACGTAAACACCCATA 182558
||||| |||||| || ||
Sbjct 5318 CCAGTTAT---TAAACATCCTTA 5299
>seq53127
Length=7988
Score = 91.5 bits (100), Expect = 3e-13
Identities = 103/140 (74%), Gaps = 11/140 (8%)
Strand=Plus/Minus
Query 81643 CAGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA------ 81696
|| |||| |||||||||| |||||||| || || || || | | ||||| ||
Sbjct 5798 CAAAGTAGATTCCTTCTGGATATTATAGTCTGACAGTGTGCGCCCATCTTCCAATTGCTT 5739
Query 81697 -----CAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGC 81751
| || ||||||||||||||| ||||| | || ||||||| ||||||||||||||
Sbjct 5738 TCCGGCGAAAATTAGTCTTTGTTGATCTGGAGGGATGCCTTCCTTGTCTTGAATCTTTGC 5679
Query 81752 TTTTATATTTTCAATCGTAT 81771
|||| ||||| || ||||
Sbjct 5678 CTTTACGTTTTCGATTGTAT 5659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 900727910639040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |