Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq21383 194 2e-44
seq53127 104 2e-17
seq44559 102 8e-17
seq24004 100 3e-16
seq47412 82.4 7e-11
>seq21383
Length=8822
Score = 194 bits (214), Expect = 2e-44
Identities = 773/1202 (64%), Gaps = 31/1202 (3%)
Strand=Plus/Plus
Query 24794 GTGGCGGCGTACTTTGTCGAGTGGGGTGTGTACCCGCGCCAGTTTCCCGTCGACAAGGTG 24853
|||| || ||||| || || |||||||| || || | | || ||||| || |
Sbjct 1088 GTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATA 1147
Query 24854 CCCGCGCCCAACCTCTCGCACTTGCTCTACGGCTTTGTGCCCATCTGCGGCGGCGCGGGC 24913
|| || || || | || ||||||||||||||| | || || |||||||| | |||
Sbjct 1148 CCTATACCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGC 1207
Query 24914 ATCAACGATGCGCTAAAAACTGTGCCGGGCAGCTTCGAGGCGCTGCAACGATCGTGCGCC 24973
||||| ||| ||||| | ||||| ||| | || || || ||||| || |
Sbjct 1208 ATCAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGATCCTGTAGC 1267
Query 24974 GGCCGCGCCGACTTCAAGGTGGCCATCCACGATCCGTGGGCGGCCATACAGAAACCGCAG 25033
||||| | |||||||| || | ||||||||||| ||||| || |||| ||||| ||
Sbjct 1268 GGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAA 1327
Query 25034 AAAGGCGTGTCCGCGTGGAACGAGCCGTACAAGGGCAACTTTGGCCAGCTGATGGCGCTG 25093
||||| |||| | ||||||||||| ||||| |||||||||||||| | ||| | ||
Sbjct 1328 AAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTA 1387
Query 25094 AAGCGCGCCTACCCGCACCTCAAAGTGCTGCCCTCGATCGGCGGCTGGACGCTGTCCGAC 25153
|| | ||| ||| | | || | || || || || || || |||||||| ||||
Sbjct 1388 AAACAAGCCCGCCCTGAATTGAAGATTCTTCCATCTATTGGTGGGTGGACGCTTGCCGAT 1447
Query 25154 CCGTTCTTCCACATGCACGACAAGGCGGCGCGCCAGACG-TTTATCGACTCGGTGCAAGA 25212
|| |||||| | ||||| | | | | ||| ||| | | || || | ||
Sbjct 1448 CCTTTCTTCTTTTTAGTTGACAAATCTAAGAG-AACACGATTTGTGCAGTCAGTAAAGGA 1506
Query 25213 GTACCTCGTCACCTGGAAGTTCTTTGACGGCGTCGACCTCGATTGGGAGTTTCCCGGCGG 25272
|| || | || ||||| ||||| || || || || ||||||||||||| || || ||
Sbjct 1507 GTTTCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGG 1566
Query 25273 CAAGGGCGCCAACCCGGACGTGGGCAACGCCGAGCGCGATCGCGCCACCTACACTACCCT 25332
||| || || ||||| ||| | || | ||| || ||| | | || | |
Sbjct 1567 CAAAGGTGCTAACCCTGACCTCGGTA--GCCCAG-AAGATGGTGATTGTTATGTAAGTTT 1623
Query 25333 GTTGGCGGAGCTGCGCGCGATGCTCGACGCGCTCGGTGCCCACCAAAACCGCCACTACCT 25392
| || || | || | |||||| || | |||| || | | | |||
Sbjct 1624 GATGAAAGAATTACGTGAGATGCTGGATGAGCTCTCAGCTAAGAATGGTAAGAAATACGA 1683
Query 25393 GCTCACTAGCGCGATTAGCGCGGGCAACGACAAGATCGCCGTCGTCGACTACACTGAGGC 25452
| ||| || ||||| || || || || ||| || || |||||| | ||
Sbjct 1684 ATTAACTTCTGCTATTAGTGCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAAGC 1743
Query 25453 GCAAAAGTATCTCGATCTGATATTCCTCATGTCGTACGATTTTAAGGGCGGCTGGTCGCT 25512
||||| ||| | |||| || ||| | ||| ||||| || ||||| | ||||||
Sbjct 1744 TCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTC--- 1800
Query 25513 CAACGA---GCTCGGTCATCAGACGGCGCTTTACGCGCCCCCGTGGCGGCCCGACGAACC 25569
|| || || || ||||| ||| | | |||||||| ||||| ||| | ||| |
Sbjct 1801 AAATGATACTCTTGGACATCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAAAC 1860
Query 25570 GTACTGCGCGGACCGCGCGGTCGAGGCGCTGCTCGCGCAACACGTG---CCCAAGAACAA 25626
||| | ||| | || | |||| ||||| ||| || ||| ||
Sbjct 1861 TTACACATCTGACTTTGGAGTAAAATACTTGCTGGCGCAGGGAGTGAATCCTAAG---AA 1917
Query 25627 GATTGTGCTGGGCGTTGCCATGTACGGCCGCGGCTGGACGGGCGT---AGCGAGCGACGA 25683
|||||| | || ||||| ||||| || || || ||||| ||||| | | | ||
Sbjct 1918 GATTGTAGTAGGTGTTGCTATGTATGGTCGTGGTTGGACTGGCGTTCATGATTACAAAGA 1977
Query 25684 CAGCGACAATCCATTCTTGGGCACCGCCACCGGTCCCGTCCCCGGCACCTGGGAGGACGG 25743
|| ||| ||| ||| |||| ||| || || || ||| || || ||| | |||||
Sbjct 1978 CA---ACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGG 2034
Query 25744 CGTCGTCGACTATCGACAGATTGC---TCACAAC-CTCACG--CAGTACACGTACGCGTA 25797
|| || |||||| | ||||||| | | | | |||| | ||| || | ||
Sbjct 2035 AGTGGTTGACTATAGGGAGATTGCGAATGAAATCGCTCAAGGCAAGTGGGAGTTCCATTA 2094
Query 25798 CGACGACGTTGCCAAGGCGGCGTACATTTATCGCGCATCCGACGG-CAACTTGATTAGCT 25856
|||| | || ||| | || | ||| | | | |||| || | |||| | | ||
Sbjct 2095 CGACAATGTCGCCCAAGCCCCTTACGTCTTCAGACCATCAACTGGAGATCTTG-TAACCT 2153
Query 25857 ACGACGACGCTGCCTCGGTCACCGCCAAGGCCAAATATGTATTGGACCACGAGCTGGCCG 25916
| || | ||| ||||| | | |||| ||||||||| | || |||| | |
Sbjct 2154 ATGATAATGCTAGATCGGTTATTGAAAAGGGTAAATATGTAAGAAATAACAAGCTAGGTG 2213
Query 25917 GTCTGTTTGCCTGGGAAATTGACGCCGACAACGGTGACCTGCTCAACGCCATGAACAAGG 25976
|||| ||||| |||||| | ||||| || ||||||||||| || || |||||||||| ||
Sbjct 2214 GTCTCTTTGCTTGGGAAGTGGACGCTGATAACGGTGACCTACTGAATGCCATGAACATGG 2273
Query 25977 GT 25978
||
Sbjct 2274 GT 2275
>seq53127
Length=7988
Score = 104 bits (114), Expect = 2e-17
Identities = 151/209 (72%), Gaps = 6/209 (3%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512
||||||| || || |||||||| |||||||| || || ||| ||| ||||| |
Sbjct 6943 AAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCAG--ATAGTGTACGTCCATCCTCAA 6886
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
||||||| || || |||| |||| || ||||| ||||| ||||||||||| || |||
Sbjct 6885 GCTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTATC-TTGA 6827
Query 133573 TCTTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631
||| | ||| | | || | ||||| | |||||| || || | |||| || |||
Sbjct 6826 ATTTTCGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCTTG 6767
Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||| || ||||| || || |||||
Sbjct 6766 CCAGTCAGTGTCTTTACAAATATTTGCAT 6738
Score = 82.4 bits (90), Expect = 7e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|| || || ||||| ||||| || || || ||| | || || | ||||| ||
Sbjct 5794 GTAGATTCCTTCTGGATATTATAGTCTGACAGTGTGCGCCCATCTTCCAATTGCTTTCCG 5735
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| |||| || | || || || |||||||||||||||||||| |||||| |||
Sbjct 5734 GCGAAAATTAGTCTTTGTTGATCTGGAGGGATGCCTTCCTTGTCTTGAATCTTTGCCTTT 5675
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | || | || || | | ||||| || | |||| |||||| || || | ||||
Sbjct 5674 ACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTT 5615
Query 133644 TTTACGAAAATCTGCATG 133661
|||||||| || ||||||
Sbjct 5614 TTTACGAAGATTTGCATG 5597
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/207 (70%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || ||||| ||||| ||||| || || || ||| | | | || || ||
Sbjct 7171 AAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGTCCA-TCTTCCAG 7113
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||| || ||| |||| || | || ||||| ||||| |||||||||||||| ||
Sbjct 7112 TTGCTTTCCGGCGAAAATCAGTCTTTGTTGGTCTGGAGGAATGCCTTCCTTGTCTTGAAT 7053
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
|||| ||| | | || | || || | | ||||| || | |||| ||||| ||
Sbjct 7052 CTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCC 6993
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| ||||| || ||||| |||||
Sbjct 6992 AGTCAATGTTTTCACAAAAATTTGCAT 6966
>seq44559
Length=2984
Score = 102 bits (112), Expect = 8e-17
Identities = 145/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||||||||| |||||||| || | || | | | ||||| |||||||||||
Sbjct 1088 GTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGGCCA-TCCTCCAGCTGCTTGCC 1030
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| ||||||| || || || || || || || || || ||||| |||| || ||||
Sbjct 1029 AGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATC-TTGGCTT 971
Query 133583 GAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | |||| ||||| | ||| || || || | |||| ||||| || ||||| |
Sbjct 970 TAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTCCCTGTCAGTG 911
Query 133642 TTTTTACGAAAATCTGCAT 133660
| ||||| || ||||||||
Sbjct 910 TCTTTACAAAGATCTGCAT 892
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/208 (72%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||||||||| ||||||||||| || ||| ||| | || || |
Sbjct 641 AAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCA-TCTTCCAA 583
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||| || || ||||||| ||||| ||||| || |||||||| ||||| || ||
Sbjct 582 TTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATC-CTGTA 524
Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| || |||| | ||| | ||||| | || || || || | ||| | ||| || |
Sbjct 523 TTTTAGCTTTGACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTC 464
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| |||| ||||| || || || |||||
Sbjct 463 CAGTCAATGTTTTGACAAATATTTGCAT 436
Score = 82.4 bits (90), Expect = 7e-11
Identities = 146/208 (70%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||||||||||||||| |||||||| || || ||| | | | || || ||
Sbjct 869 AAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCA-TCTTCCAG 811
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||| || ||| | || || || || || || ||||| || |||||||| || |||
Sbjct 810 TTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATC-TTGAA 752
Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|| |||| | | | |||| ||||| | ||||| || || | || | ||||| |
Sbjct 751 TCTTAGCTTTAACATTTTCAATGGTGTCTGAAGGCTCAACTTCCAAAGTTATTGTTTTTC 692
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || || ||||| || || || |||||
Sbjct 691 CAGTAAGTGTTTTGACAAATATTTGCAT 664
>seq24004
Length=11461
Score = 100 bits (110), Expect = 3e-16
Identities = 432/680 (64%), Gaps = 6/680 (1%)
Strand=Plus/Minus
Query 148311 GTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATG 148370
||||| |||||||| || || ||||||| | ||| || || || | || || |||||
Sbjct 9606 GTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATA 9547
Query 148371 TACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCC 148430
|||| || || || ||||||||||| | ||| ||| || || || | |||
Sbjct 9546 GGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCC 9487
Query 148431 CAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTA 148490
|||||||| || | || || || |||||| || ||||| || || || ||||
Sbjct 9486 CAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTT 9427
Query 148491 GCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCC 148550
|| || || || | || | |||||| | || | | || | ||| || || ||
Sbjct 9426 GCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCT 9367
Query 148551 TCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCG 148610
|| | || || || ||||| || || ||||| ||||| || || |||
Sbjct 9366 TCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCA 9307
Query 148611 CTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCA 148670
|||||||| | || | || | ||||||||| || || | |||||| || || | |||
Sbjct 9306 CTTTCGTAAGATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCA 9247
Query 148671 ATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC---GAGCGGATAGTGGTTGCGG 148727
|| || | ||| | || || || | ||| || || ||||| ||
Sbjct 9246 ATAGGTCTATGTCTCATATT--TGAAGTTTTTGCT-TCAGGGACAGGATAAAAATTAACA 9190
Query 148728 TCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAA 148787
|| || | |||| | ||| | || | |||||| ||| | || ||||
Sbjct 9189 TCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAA 9130
Query 148788 TCGTACTTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCC 148847
| | ||| || | | | | ||| | || || || || || |||||||| |||
Sbjct 9129 TTAAATCTGTTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCC 9070
Query 148848 GTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACG 148907
||||| | |||| | || | ||| | ||| |||||||| ||||| || |
Sbjct 9069 ACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTG 9010
Query 148908 CCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCG 148967
|| | || |||||||| ||||| ||||| || || ||||| |||| |||||| |||
Sbjct 9009 CCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTA 8950
Query 148968 CCAGTTTCCACCTGCGTTTC 148987
||||| ||||| || | |||
Sbjct 8949 CCAGTCTCCACTTGGGCTTC 8930
>seq47412
Length=1128
Score = 82.4 bits (90), Expect = 7e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 116473 CACGGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAA 116532
|| ||||| ||||||||||||||||| |||| || || ||||||||||| || ||
Sbjct 738 CATGGCTTTCACGTGCACGAGTTTGGTGACAACACAAATGGCTGCACCTCAGCTGGTCCT 679
Query 116533 CACTTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGT 116592
|||||||| || ||||||| || | ||| || | | || | || || |||
Sbjct 678 CACTTCAATCCTCTAAAAAAGGACCATGGAGGTCCCGACTCGTCGGTCAGACATGTTGGT 619
Query 116593 GACCTGGGCAACATTGAGGC 116612
||| |||| |||||||||||
Sbjct 618 GACTTGGGAAACATTGAGGC 599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 481984955625360
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