Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq24004 190 5e-43
seq53620 123 6e-23
>seq24004
Length=11461
Score = 190 bits (210), Expect = 5e-43
Identities = 431/644 (67%), Gaps = 13/644 (2%)
Strand=Plus/Plus
Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579
|| || || ||| ||| || || || ||| ||||||||||| | |||| || | |||
Sbjct 8396 TCCTGTTTCCTTATAGCTATGAAAGACGATAGCATTGAAGGTATCTTTGATACTTTAAAA 8455
Query 110580 GAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGT----ATTCACGTT-CATGATA 110634
|| ||| | ||||||||| |||| || || ||| || ||| || ||| | |
Sbjct 8456 CAATGTGCATTAATTTCTAAATCTGCTGGTGGCATAGGTTTACATACACATTGCATCAGA 8515
Query 110635 TTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAA 110694
||||| || | | || || | || || | |||| ||| || || ||||
Sbjct 8516 ---GCTCAG--GGTTCTTACATAGCTGGCACTAATGGGGTCTCAAATGGTCTAGTGCCAA 8570
Query 110695 TGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---G 110751
|||| ||||| | ||| | ||||| | |||||| |||||||||| || | | | |
Sbjct 8571 TGTTGAGAGTGTATAACAATACTGCCAGATATGTAGATCAAGGTGGAAACAAACGTCCCG 8630
Query 110752 GCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTC 110811
|| ||||||| || ||| | || ||||||||| | ||||||||||||||||| || |
Sbjct 8631 GCGCATTTGCAATTTATTTAGAGCCTTGGCATGCGGATATATTTGAATTCTTGGATTTAA 8690
Query 110812 GTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTT 110871
|| || ||| |||||| ||||| | || | |||||||| | |||||
Sbjct 8691 AGAAGAACACAGGTAAGGAAGAAATGAGAGCTAGAGAACTGTTTTATGCTTTATGGATAC 8750
Query 110872 CAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATC 110931
||||| | || |||||| | || || | ||| | ||| ||| ||||||||||||
Sbjct 8751 CAGATCTGTTTATGAAAAGAGTAGAAAAGGATGAAGTTTGGAGTCTCATGTGTCCTCATG 8810
Query 110932 GTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATG 110991
|| |||||| || |||| | |||| | || ||||| || || || | |||||||
Sbjct 8811 ATTGTCCTGGCCTCGCTGACTGCTTTGGAGAGGAATTTGACGAACTATATGCCAAATATG 8870
Query 110992 AAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTG 111051
|| ||||| ||| |||||| | ||||||||| | ||| ||| | |
Sbjct 8871 AAGAAGAAAAACGATTTATAAAACAAGTCAGAGCTCAAGAGTTATGGAAGTCAATTATAG 8930
Query 111052 AATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAAT 111111
|| | ||||| || ||||| || || || || |||||||| ||| | ||| | ||
Sbjct 8931 AAGCCCAAGTGGAGACTGGTACACCATACATGTTGTATAAGGATGCTTGTAACAGAAAGA 8990
Query 111112 CTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155
|||||||| ||| | || || ||||| | ||| ||| | |||
Sbjct 8991 GTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 9034
>seq53620
Length=3460
Score = 123 bits (136), Expect = 6e-23
Identities = 346/514 (67%), Gaps = 34/514 (7%)
Strand=Plus/Minus
Query 304988 AAAGGTAAAGAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCA 305047
||||||||||| || | || |||| ||||| |||||||| || ||||| ||| |||
Sbjct 3457 AAAGGTAAAGAAGGGAGAATCAGAGGAAATCTTATGGGAAAGCGAGTTGACTTTTCTGCC 3398
Query 305048 AGAAGTGTAATCACACCTGATTCTCAAATTA-GTCTTCATGAATTAGGAGTTCCAATTGA 305106
|||| |||||||| |||||| || || ||| || || || || ||||||| ||
Sbjct 3397 AGAACCGTAATCACTCCTGATCCT-AATTTACGTATTGATCAAGTAGGAGTGCCTCGCTC 3339
Query 305107 AATTGCTTTAAAACTAACATTTCCAGAGAAAGTTA-ACGAGAAAAATATTAAACATTTG- 305164
|||||| ||| ||||||| ||||| ||| | || | || ||| | | ||
Sbjct 3338 TATTGCTCAAAATTTAACATTCCCAGAACTAGTAACACCATTTAA-TATAGACCGAATGC 3280
Query 305165 AGACGTTGTGTTCTTAATGGAAATAGCA-AGTATCCAGGTGCTCGTGCTGTTATAAAACA 305223
|| |||| |||| || |||||| ||| ||||||||||||| |||| |
Sbjct 3279 AGGAGTTG-GTTCGTAGGGGAAAT-GCACAGTATCCAGGTGCAAAG-----TATATAGTC 3227
Query 305224 CAAGCAAAAGAAGACA--ATATCTTTGAACCATATCGATTTAAAACAATTCAGTAAAATG 305281
| || || | ||| | ||| | ||| | || || ||| | || ||| ||
Sbjct 3226 CGAGATAATGGAGAAAGAATAGATCTGAGG--TTTC-ATCCAAAGCCAT-CAG----AT- 3176
Query 305282 CTTGAAATTAATGATATTGTTATCA--------GACATTTGAATGACAATGATTGGGTTC 305333
||| | ||| |||| |||| | | || |||| ||| |||||| ||||
Sbjct 3175 -TTGCATTTACA-ATATGGTTACAAAGTGGAGCGTCACTTGAGAGACGATGATTTGGTTA 3118
Query 305334 TGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTAT 305393
| |||||| | || ||| | |||| |||||| |||||||| ||| | || |||||||
Sbjct 3117 TTTTCAATCGACAGCCAACTTTGCACAAAATGAGTATGATGGGTCACAGGGTGAAAGTAT 3058
Query 305394 TATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTG 305453
| | | | |||||||| | ||| | ||| | |||| || ||||| |||||||
Sbjct 3057 TGCCGTGGTCTACATTTCGTATGAATTTGAGTTGCACTTCGCCATACAATGCTGATTTTG 2998
Query 305454 ATGGAGATGAAATGAATATGCATGTACCTCAATC 305487
| || || ||||||||| | ||||||||||||||
Sbjct 2997 ACGGCGACGAAATGAATTTACATGTACCTCAATC 2964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1183199632249054
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |