Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq139616 104 7e-19 seq39314 102 3e-18 seq23214 102 3e-18 seq173370 100 9e-18 seq173369 100 9e-18 seq34194 100 9e-18 seq12144 100 9e-18 seq201770 98.7 3e-17 seq156511 98.7 3e-17 seq156510 98.7 3e-17 seq139272 98.7 3e-17 seq122692 98.7 3e-17 seq88554 98.7 3e-17 seq69360 98.7 3e-17 seq1798 98.7 3e-17 seq66552 95.1 4e-16 >seq139616 Length=1186 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 384 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 443 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 444 CCGGGTTTCGGC 455 >seq39314 Length=1342 Score = 102 bits (112), Expect = 3e-18 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 124 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 65 Query 2827 CCCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 64 TCCCGGGTTTCGGC 51 >seq23214 Length=4206 Score = 102 bits (112), Expect = 3e-18 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 2672 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 2731 Query 2827 CCCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 2732 TCCCGGGTTTCGGC 2745 >seq173370 Length=384 Score = 100 bits (110), Expect = 9e-18 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 2763 TTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGT 2822 || || || ||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 120 TTCATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGT 179 Query 2823 TCAACCCCGGGCTTCAGC 2840 || | |||||| ||| || Sbjct 180 TCGATCCCGGGTTTCGGC 197 >seq173369 Length=371 Score = 100 bits (110), Expect = 9e-18 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 2763 TTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGT 2822 || || || ||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 112 TTCATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGT 171 Query 2823 TCAACCCCGGGCTTCAGC 2840 || | |||||| ||| || Sbjct 172 TCGATCCCGGGTTTCGGC 189 >seq34194 Length=9533 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 3651 ATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCG 3592 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 3591 ATCCCGGGTTTCGGC 3577 >seq12144 Length=11647 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 9813 ATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCG 9754 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 9753 ATCCCGGGTTTCGGC 9739 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 6977 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 6918 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 6917 CCGGGTTTCGGC 6906 >seq201770 Length=622 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 246 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 305 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 306 CCGGGTTTCGGC 317 >seq156511 Length=1261 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 319 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 260 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 259 CCTGGTTTCGGC 248 >seq156510 Length=1298 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 321 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 262 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 261 CCTGGTTTCGGC 250 >seq139272 Length=1123 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 556 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 615 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 616 CCGGGTTTCGGC 627 >seq122692 Length=1526 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 896 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 837 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 836 CCGGGTTTCGGC 825 >seq88554 Length=2250 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 245 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 304 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 305 CCGGGTTTCGGC 316 >seq69360 Length=820 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 94 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 35 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 34 CCGGGTTTCGGC 23 >seq1798 Length=9706 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 5268 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 5327 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 5328 CCGGGTTTCGGC 5339 >seq66552 Length=2707 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| |||||| | Sbjct 855 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCAGTTCAATC 796 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 795 CCGGGTTTCGGC 784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15808408425030