Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq207359 122 7e-23 seq31223 122 7e-23 seq44559 98.7 8e-16 seq53127 96.9 3e-15 seq45806 87.8 1e-12 >seq207359 Length=487 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| |||||||||||| | ||||| || || ||||| | ||| ||| | Sbjct 215 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 274 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | |||||| ||||| |||||||||||| | || |||||| Sbjct 275 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 334 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||||| ||||||||| |||||||||||| | || || || |||||| Sbjct 335 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACAAC 394 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || |||||||||||||| | || |||||| | | ||| |||| || Sbjct 395 ATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGG 441 >seq31223 Length=3647 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||||||||||||| | ||||| || || ||||| | ||| ||| | Sbjct 273 ATGCAAATTTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 214 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | |||||| ||||| |||||||||||| | || |||||| Sbjct 213 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 154 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | ||||||| ||||||||| |||||||||||| | || || || || ||| Sbjct 153 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTATAAC 94 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || |||||||||||||| | || |||||| | | ||| |||| || Sbjct 93 ATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGG 47 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 |||||||| || ||||| |||||| | || || || |||||||| ||||| ||||| Sbjct 732 AAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCT 673 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 |||| || ||| | || ||| |||||| ||||| |||||| | || ||| Sbjct 672 TCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 613 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 |||||| | | |||| || || || ||||| ||||| ||| | || || Sbjct 612 CAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTAT 553 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 || || |||||||||||||| || || || |||||| Sbjct 552 AATATTCAAAAAGAATCTACTCTTCACTTGGTATTG 517 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| || |||||||| || | || || || ||||| || | || ||| || Sbjct 502 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTC 443 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| || | | | ||||| ||| || |||||||| || | ||| ||||| Sbjct 442 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 383 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATT--CTAAAACTATGGGCGATTAC 106436 ||| |||||||||| ||| || |||||| | |||||| | | | ||| | |||| Sbjct 382 ACAGAGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTG--ATTAT 325 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || ||||| ||||| || ||||||||||||||| || | || || || Sbjct 324 AATATTCAAAAGGAATCGACCCTACATTTAGTATTGCGGCTTCGTGGCGG 275 >seq44559 Length=2984 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| |||||||||||||| |||||||||||| ||||| |||||| Sbjct 436 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 495 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | | | | || ||| ||||| || || || ||| | ||| || ||| Sbjct 496 GACACAATCGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 555 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | || |||| ||| || || ||||| |||||| | ||| || |||||||| Sbjct 556 CAGCGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 615 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || || ||||| || || || || ||||| Sbjct 616 ATTCAGAAAGAGTCAACCCTGCACTTAGT 644 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 106284 ACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGTTGGCCAAGTGAAACAA 106343 ||||| |||||||||||| ||||| |||||| ||| || ||| | || ||| Sbjct 4 ACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCTGATACTATTGAAAATGTAAAAGCT 63 Query 106344 AAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAA 106403 ||||| |||||||| ||| | || |||||| || | ||||| | ||| || || Sbjct 64 AAAATCCAAGACAAAGAGGGCATCCCACCTGATCAGCAGCGTCTTATCTTTGCTGGTAAG 123 Query 106404 CAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACAT 106463 ||||| |||||| | || || || |||||||| ||||| || ||||| || ||| Sbjct 124 CAATTGGAAGATGGTCGCACCCTGTCTGACTACAACATCCAAAAGGAGTCTACCCTTCAT 183 Query 106464 TTAGTATTGAGGTTACGAGGAGG 106486 ||||| || | | ||||| || Sbjct 184 CTAGTACTGCGTCTGCGAGGTGG 206 >seq53127 Length=7988 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||||||||| || || ||| ||||||||||||| || || ||||| || || Sbjct 5825 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTC 5884 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || ||| ||||||| || ||||| || | ||| ||||| Sbjct 5885 TGATACAATTGAAAATGTTAAAGCAAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCA 5944 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTAC 106436 ||||| ||||||| ||| || || || | |||||| | | ||||| |||||| Sbjct 5945 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGATTAC 6002 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 ||||| || ||||||||||| | || ||||| | || | |||| ||| Sbjct 6003 AACATTCAGAAAGAATCTACTTTGCACCTAGTACTACGGCTGAGAGGTGGA 6053 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||||||||||||||| ||| ||||||||||||| || || ||||| ||| | Sbjct 6281 AATGCAAATTTTTGTTAAGACACTGACTGGCAAGACTATCACTTTGGAAGTGGAAGCTTC 6340 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | ||| | || ||| ||||||| || ||||| || | ||| ||||| Sbjct 6341 TGATACAATTGAAAATGTTAAAGCAAAAATTCAGGATAAAGAGGGTATTCCCCCAGATCA 6400 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTAC 106436 ||||| ||||||| ||| || || || | |||||| | | ||||| || ||| Sbjct 6401 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGACTAC 6458 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 || || || || ||||| || | || | ||| || |||| |||| ||| Sbjct 6459 AATATTCAGAAGGAATCAACTTTGCACCTGGTACTGCGGTTGAGAGGTGGA 6509 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||| ||||| || ||| |||||||||| || || || ||||| ||| | Sbjct 6053 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTC 6112 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | | | | || || ||||||| |||||||||||| | || ||| || Sbjct 6113 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCA 6172 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||| |||||||||| ||| || ||||| | |||||| || || ||||| || Sbjct 6173 ACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATAA 6232 Query 106439 CATACAAAAAGAATCTAC 106456 || ||||| |||||||| Sbjct 6233 TATTCAAAAGGAATCTAC 6250 Score = 86.0 bits (94), Expect = 5e-12 Identities = 148/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||| ||||| || ||| ||||||||||||| || || ||||| || ||| Sbjct 6737 AATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 6796 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || | | | | || || |||||| || || |||||| | || || || Sbjct 6797 TGACACAATCGAAAATGTTAAGGCGAAAATTCAAGATAAGGAAGGCATTCCTCCAGACCA 6856 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTAC 106436 |||||||||||||| ||| || || || | || ||| | | ||||| || ||| Sbjct 6857 ACAAAGGCTTATTTTTGCTGGAAAGCAGCTTGAGGATGGACGTACACTAT--CTGACTAC 6914 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTA 106469 || || || ||||||||||| ||||||||||| Sbjct 6915 AATATTCAGAAAGAATCTACTTTACATTTAGTA 6947 >seq45806 Length=6479 Score = 87.8 bits (96), Expect = 1e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 99638 AACGGGTTTTATTATTTGGGGCGCGCGGACGAAGTGCGCTGCGCGTTTTGCAAAGTTGAA 99697 || || || |||||| |||| |||| || ||||| |||||||||||||| ||||| ||| Sbjct 4832 AATGGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 4891 Query 99698 ATAATGCGCTGGTTGGAGGGCGACGACCCGGCTGCAGATCATAAACGATGGGCGCCGCAA 99757 || ||| ||| | | ||||||||| || || || || | || |||||||| || Sbjct 4892 ATTATGAAATGGGTTGCGGGCGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCTCAG 4951 Query 99758 TGCCCGTTTATGCAGC 99773 ||||| || ||| || Sbjct 4952 TGCCCTTTCTTGCGGC 4967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401164485413312