Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq4347 129 8e-24
seq57358 100 4e-15
>seq4347
Length=347
Score = 129 bits (142), Expect = 8e-24
Identities = 171/234 (73%), Gaps = 10/234 (4%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||| |||||||| || || ||||| |||| ||| |||| |||| |
Sbjct 121 ATCTACAAAGTGCTCAAACAAGTCCACCCGGACACCGGA-----ATC-TCCAGCAAGGCG 174
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| |||||||||||||| || |||||||| |||| || |||| | ||||||| ||
Sbjct 175 ATGTCCATCATGAACTCGTTCGTGAACGACATTTTCGAGCGTATCGCCGCCGAGGC--GT 232
Query 725031 CGC--CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCG 725088
||| || || | || ||||||| | ||||||| | | ||| | |||||| |||
Sbjct 233 CGCGACTCGCCCACTACAACAAGAGGTCCACGATCACGTCCAGGGAGGTGCAGACCTCCG 292
Query 725089 TGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | || | ||| |||||| |||||| |||||||||| ||| |||||||
Sbjct 293 TGAGGCTCCTGTTGCCCGGCGAGTTGGCCAAGCACGCCGTCAGCGAAGGCACCA 346
>seq57358
Length=4629
Score = 100 bits (110), Expect = 4e-15
Identities = 162/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|| ||||| ||| | |||||||| ||||| || |||| ||| || | ||| ||
Sbjct 888 ATTTACAAAGTGTTGAAGCAGGTTCACCCGGACAC---TGGG--ATC-TCGAGTAAGGCC 941
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| || ||||| || ||||||||||| || | || ||||||| |||||||
Sbjct 942 ATGTCTATTATGAATTCCTTTGTCAACGATATTTTTGAACGCATCGCGGCCGAGGCGTCC 1001
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|||||||||| || ||||||| | |||||| || | || | |||||| ||||
Sbjct 1002 CGCCTGGCGCACTACAACAAGAGGTCAACGATCACGTCGAGGGAAGTGCAGACCTCCGTC 1061
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| || || | | |||||| || || | ||||| ||| |||||| ||
Sbjct 1062 CGTCTCCTCCTTCCCGGCGAGCTCGCGAAACACGCTGTCAGCGAGGGAAC 1111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7154892892965468
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |