Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq53127 111 1e-19
seq31223 111 1e-19
seq207359 95.1 1e-14
seq88586 86.0 6e-12
>seq53127
Length=7988
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
||||||| | || | ||| || ||||| || ||| |||||| || || || || || |
Sbjct 7194 TTCCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCTG 7135
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
||| || || | || ||||| ||||| || || || |||| | || ||||| | ||
Sbjct 7134 ACAATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGGTCTGGAG 7075
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687
||| || |||||||| |||||| ||| | | || | | || || | |||||
Sbjct 7074 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCA 7015
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
| |||| ||||| ||||| || ||||| ||||||||||| || |||||
Sbjct 7014 CTTCCAAAGTGATAGTTTTCCCAGTCAATGTTTTCACAAAAATTTGCAT 6966
Score = 109 bits (120), Expect = 5e-19
Identities = 165/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
||||||| | | | || |||||| || || ||| ||||||||||| || ||||| |
Sbjct 6282 TTCCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCTG 6223
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
|| || || | || |||||||| || || ||||| || | || ||| ||||| | ||
Sbjct 6222 ACAGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAG 6163
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686
||| || || |||| | ||| ||||| ||| | | || | | || || | ||||
Sbjct 6162 GAATGCCTTCTTTGT-CTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCC 6104
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| |||| ||||| ||||| || |||| || || |||||||| |||||||
Sbjct 6103 ACTTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATTC 6052
>seq31223
Length=3647
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | || ||| || ||||||| || ||||||||||| || ||||| |
Sbjct 275 CCGCCACGAAGCCGCAATACTAAATGTAGGGTCGATTCCTTTTGAATATTATAATCAGAT 334
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || ||||| || || || ||||| || | || ||| || || | |||
Sbjct 335 AATGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGA 394
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||| ||||| ||||||| ||||| | || | | |||||| || || |||
Sbjct 395 ATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACC 454
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|| | ||||| ||||| || || | ||| || ||||| ||||||||||
Sbjct 455 TCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATTC 503
Score = 104 bits (114), Expect = 2e-17
Identities = 165/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||||||||| | | ||| ||||| || | ||| || |||||||| || || || |
Sbjct 501 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAG 560
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| || || |||| |||| ||||| || || || ||||| || || || || | ||
Sbjct 561 AAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 620
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTC-AGAGTTGCCACCGTGTCGCTCGATTCC 35686
||| || |||||||| ||| ||| |||| | | || | | || ||| | |||
Sbjct 621 GAATGCCTTCCTTGTCT-TGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCA 679
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740
|| |||| || || ||||||||||| | ||||||||||| ||||||||| ||
Sbjct 680 ACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTG 733
>seq207359
Length=487
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|| ||||| | || ||| || ||||||| ||| ||||||||||| || ||||| |
Sbjct 213 CCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGAT 154
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| || || | || ||||| || || || || || |||| || ||| || || | |||
Sbjct 153 AATGTACGGCCATCTTCCAGTTGTTTTCCAGCGAAAATCAGCCTCTGTTGATCTGGGGGA 94
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| | ||| ||||| ||||||| ||||| | || | | |||||| || ||| |||
Sbjct 93 ATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTCTACC 34
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721
|| | || || ||||| || || | ||| ||
Sbjct 33 TCAAGAGTAATGGTTTTTCCTGTAAGAGTCTT 2
>seq88586
Length=4530
Score = 86.0 bits (94), Expect = 6e-12
Identities = 138/196 (70%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||||||||||||||| || | ||| || || | || || || || ||||| |||||
Sbjct 2215 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 2274
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGT 35664
||||| || |||||||| | |||| | ||||| || ||| ||| || || | | |
Sbjct 2275 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGAT-TTTAGCTTTAACATT 2333
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | | || || | |||||||| | || || ||||||||||| | || || ||
Sbjct 2334 TTCTATAGTATCAGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGAC 2393
Query 35725 AAATATCTGCATTCTG 35740
|| || |||||| ||
Sbjct 2394 GAAAATTTGCATTGTG 2409
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449454664119120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |