Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq24004 614 7e-171
seq32346 98.7 1e-15
>seq24004
Length=11461
Score = 614 bits (680), Expect = 7e-171
Identities = 1124/1629 (69%), Gaps = 23/1629 (1%)
Strand=Plus/Minus
Query 68354 TTATTTTATCCTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGAT 68413
|||||||| | || || | ||||||||||| | | ||| |||||||| |||| |
Sbjct 10016 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 9957
Query 68414 AGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGG 68473
||||||| || ||||| | || | |||| ||| |||||| || || |||||
Sbjct 9956 AGTACATTCCTGTTTTTAATCCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 9897
Query 68474 AATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTC 68533
||| | || | || | ||| || || | ||||||||||| || || ||||||||||
Sbjct 9896 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 9837
Query 68534 TATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCT--TAAAAAT 68591
|||| || ||||| | ||| | || | | ||| ||||| | || | || ||||
Sbjct 9836 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 9777
Query 68592 CTGTTTGATATCATCTGGAAGGCT---CGTATTTTGAATGGATCCACCATCGGATATAAT 68648
|| || || || | |||| | | | ||| || |||||| | | |||||||
Sbjct 9776 CTCTT--ATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAAT 9719
Query 68649 TATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGG 68708
| ||| || || || |||| |||||| | | || ||| | | || ||||| |
Sbjct 9718 AAGATTTTTCATATCGTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATG 9659
Query 68709 ATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGG 68768
|| |||| ||||||| |||||||| ||||| | ||||||||| ||| | ||
Sbjct 9658 GTTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGG 9599
Query 68769 TTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCAC 68828
||| | ||||||| | || || |||||||| ||||| || ||||| |||||||| || |
Sbjct 9598 TTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTAT 9539
Query 68829 CAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCA 68888
||||| | ||| | | ||||||| || || || ||||| || ||| |||||
Sbjct 9538 CAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCA 9479
Query 68889 AAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGA 68948
||| || | || | ||| | ||| || || || || || | ||||| |
Sbjct 9478 AAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGAC 9420
Query 68949 TCCATT-ATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATG 69007
||| || |||||| || | ||||| | |||||||| ||||||||| || |||||||
Sbjct 9419 TCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATG 9360
Query 69008 CACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGA 69067
|||| |||||||||||||| || || | | ||||||| | ||||| ||| |||
Sbjct 9359 CACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGT 9300
Query 69068 ATGGATAATGT-AAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126
| |||| | | | | | ||| |||||||||| |||||||| |||||||| ||||||
Sbjct 9299 A-AGATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGT 9241
Query 69127 CTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 69186
||||||||| |||||||| ||| ||||| || | ||||||| |||||| ||| |||| |
Sbjct 9240 CTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACT 9181
Query 69187 TTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATCGT 69246
|| || | |||| | ||| | || | || |||| ||| ||||| |||||
Sbjct 9180 TTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTG 9121
Query 69247 CCATCTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCA--T 69304
|| | ||||||||| || ||||||| || || || || || ||||| || ||| |
Sbjct 9120 TTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCT 9061
Query 69305 TAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGAT 69364
| | || ||||| | | ||| || || ||||| |||||||| ||||| || ||||
Sbjct 9060 TCTGAAGTG--TATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGAT 9003
Query 69365 TTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTT 69424
||| |||||||||||| ||||||| || ||||| || | || | || |||||||| |
Sbjct 9002 TTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCT 8943
Query 69425 CAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTAC-GGTCTTGTAA 69483
| | || | ||| ||||| || ||||| | || || | | | | || || || |||
Sbjct 8942 CCACTTGGGCTTCTATAATTGACTTCCATA--ACTCTTG-AGCTCTGACTTGTTTTATAA 8886
Query 69484 --CGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACA-TCA 69540
|| || |||| |||||||| | |||||| || ||||| ||| || || || |||
Sbjct 8885 ATCGTTTTTCTTCTTCATATTTGGCATATAGTTCGTCAAATTCCTCT-CCAAAGCAGTCA 8827
Query 69541 TCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGT 69600
| | |||||||| |||| |||||||| | ||| || ||||| | | |||| |
Sbjct 8826 GCGAGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTT 8767
Query 69601 TTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCA 69660
|||||||| ||||| || ||||| | ||| ||| || ||||| | ||| |||||||
Sbjct 8766 TTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCC 8707
Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720
|| ||||| || || || | ||| | || || | ||||| | |||||| || |||| |
Sbjct 8706 TTACCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATATCCGCATGCCAAGGCTCTAAA 8647
Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780
|| || || | | || || ||||| ||||| || ||||||| ||||||||||| ||
Sbjct 8646 TAAATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTG 8587
Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840
||||| ||||||| ||| || | | |||||| || ||||| || |||| || |||
Sbjct 8586 TTATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATGTAA 8527
Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900
|| || | || | || || |||||| || || || |||||| |||
Sbjct 8526 GAACCCTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGAAATT 8467
Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGA 69960
| ||||| |||| || || ||| | ||||| || |||||||| ||| |||| | |
Sbjct 8466 AATGCACATTGTTTTAAAGTATCAAAGATACCTTCAATGCTATCGTCTTTCATAGCTATA 8407
Query 69961 AGAAAACAG 69969
|| ||||||
Sbjct 8406 AGGAAACAG 8398
Score = 100 bits (110), Expect = 4e-16
Identities = 88/110 (80%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 70135 TTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTAT 70194
||||| ||||| ||||||| |||||| |||||| |||||| || |||||||||||||||
Sbjct 7900 TTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTAT 7841
Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTT 70244
||| ||||| || |||| ||| |||| | || ||| ||||| | |||
Sbjct 7840 TTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 7791
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 70345 ttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCA 70404
|| || || || || |||||||| ||||| ||||||||||| || | ||| ||||| ||
Sbjct 7135 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 7076
Query 70405 GGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTT 70464
||||| | ||| || ||||||||| ||||| ||||||| |||| | || ||||
Sbjct 7075 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 7016
Query 70465 GTAACTCCGTTATATA 70480
|| || || |||||
Sbjct 7015 GTTACACCAGAATATA 7000
>seq32346
Length=5591
Score = 98.7 bits (108), Expect = 1e-15
Identities = 87/109 (80%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162
|| |||| ||||||||||| || ||||||||||| || || || ||||| ||||| | |
Sbjct 4158 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 4217
Query 40163 CATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGATTTT 40211
|||||||| ||||||| ||||| || |||||||| | | |||||||
Sbjct 4218 CATATATCTGGATATTGGATTGGGAATATAACAAAACGTCTAGGATTTT 4266
Score = 89.7 bits (98), Expect = 7e-13
Identities = 153/220 (70%), Gaps = 3/220 (1%)
Strand=Plus/Plus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
||||||| ||| ||| | ||| ||| || || | ||| ||||| ||||| || ||||
Sbjct 2979 CCTCATCCCTAGAAATAAGTTCATTACTGAAAGTCAATCCGGGCATCAGACCTCGTTTTT 3038
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
| | ||||||||| | |||||| || || || || || || || ||||||||||| |
Sbjct 3039 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAAAG 3098
Query 39759 CAACAAGTCTCTCTCCGTAACTTG-TATCATTATG--TATCCACTTCTGTGCCCAATCAG 39815
||| | | ||||| | | | | || | || ||||||| ||||| || |
Sbjct 3099 CAATTATACGTTCTCCAAATGTAGCTGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTG 3158
Query 39816 CTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 39855
| |||||||| ||||| || | ||||| || ||||| ||
Sbjct 3159 CCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGAA 3198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 684868560654960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |