Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_027339.1 Length=38389 Score E Sequences producing significant alignments: (Bits) Value seq236944 489 4e-134 seq237382 435 7e-118 seq237313 217 4e-52 >seq236944 Length=271 Score = 489 bits (542), Expect = 4e-134 Identities = 271/271 (100%), Gaps = 0/271 (0%) Strand=Plus/Plus Query 28637 GCAGCAATCAGGATTGCAATCATGGTTCCTGCATATGATGACAATGTCGCCCCAAGACCA 28696 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GCAGCAATCAGGATTGCAATCATGGTTCCTGCATATGATGACAATGTCGCCCCAAGACCA 60 Query 28697 TCTCTATGAGCTGAAAAAGAAACACCAGGAATGTAGTGGCGGAAAAGGAGATAGCAAATG 28756 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TCTCTATGAGCTGAAAAAGAAACACCAGGAATGTAGTGGCGGAAAAGGAGATAGCAAATG 120 Query 28757 CTTACGATAACGTAAGGAATTATTACTATGTAAACACCAGGCATGATTCTGTTCCGCATA 28816 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CTTACGATAACGTAAGGAATTATTACTATGTAAACACCAGGCATGATTCTGTTCCGCATA 180 Query 28817 ATTACTCCTGATAATTAATCCTTAACTTTGCCCACCTGCCTTTTAAAACATTCCAGTATA 28876 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 ATTACTCCTGATAATTAATCCTTAACTTTGCCCACCTGCCTTTTAAAACATTCCAGTATA 240 Query 28877 TCACTTTTCATTCTTGCGTAGCAATATGCCA 28907 ||||||||||||||||||||||||||||||| Sbjct 241 TCACTTTTCATTCTTGCGTAGCAATATGCCA 271 >seq237382 Length=259 Score = 435 bits (482), Expect = 7e-118 Identities = 252/259 (97%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 34275 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTTAGAGAACGTGCGAGGAAA 34334 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Query 34335 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGGAAGTGTCGAGCGAGCTTTAACGT 34394 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct 61 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 120 Query 34395 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 34454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 180 Query 34455 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGACGATGGCTAAACCA 34514 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 181 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGATGATGGCTAAACCA 240 Query 34515 GCGCGAAGACGATGTAAAA 34533 ||||||||||||||||||| Sbjct 241 GCGCGAAGACGATGTAAAA 259 >seq237313 Length=339 Score = 217 bits (240), Expect = 4e-52 Identities = 185/230 (80%), Gaps = 21/230 (9%) Strand=Plus/Plus Query 36721 ATGAGTAGAGTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 36780 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 86 ATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 145 Query 36781 TGGGCTGTTAATCATTACCGTGATAACGCCATGACCTACAAAGAACAGCGCGACAAA--- 36837 |||||||||||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct 146 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAAT 205 Query 36838 GCCACA----TCCATC--------------ATCGCTGACATGCAGAAGCGTCAACATGAT 36879 |||| | | | | || |||||||||||| |||||| | |||| Sbjct 206 GCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGAT 265 Query 36880 GTAGCTGAACTCGACGCCAGATACACAAAGGAGCTTGCTGATGCTAACGC 36929 || |||| ||||| || | |||||| |||||| | ||||||||||| || Sbjct 266 GTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGC 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122376916088468