Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_027339.1
Length=38389
Score E
Sequences producing significant alignments: (Bits) Value
seq236944 489 4e-134
seq237382 435 7e-118
seq237313 217 4e-52
>seq236944
Length=271
Score = 489 bits (542), Expect = 4e-134
Identities = 271/271 (100%), Gaps = 0/271 (0%)
Strand=Plus/Plus
Query 28637 GCAGCAATCAGGATTGCAATCATGGTTCCTGCATATGATGACAATGTCGCCCCAAGACCA 28696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GCAGCAATCAGGATTGCAATCATGGTTCCTGCATATGATGACAATGTCGCCCCAAGACCA 60
Query 28697 TCTCTATGAGCTGAAAAAGAAACACCAGGAATGTAGTGGCGGAAAAGGAGATAGCAAATG 28756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TCTCTATGAGCTGAAAAAGAAACACCAGGAATGTAGTGGCGGAAAAGGAGATAGCAAATG 120
Query 28757 CTTACGATAACGTAAGGAATTATTACTATGTAAACACCAGGCATGATTCTGTTCCGCATA 28816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CTTACGATAACGTAAGGAATTATTACTATGTAAACACCAGGCATGATTCTGTTCCGCATA 180
Query 28817 ATTACTCCTGATAATTAATCCTTAACTTTGCCCACCTGCCTTTTAAAACATTCCAGTATA 28876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 ATTACTCCTGATAATTAATCCTTAACTTTGCCCACCTGCCTTTTAAAACATTCCAGTATA 240
Query 28877 TCACTTTTCATTCTTGCGTAGCAATATGCCA 28907
|||||||||||||||||||||||||||||||
Sbjct 241 TCACTTTTCATTCTTGCGTAGCAATATGCCA 271
>seq237382
Length=259
Score = 435 bits (482), Expect = 7e-118
Identities = 252/259 (97%), Gaps = 0/259 (0%)
Strand=Plus/Plus
Query 34275 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTTAGAGAACGTGCGAGGAAA 34334
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60
Query 34335 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGGAAGTGTCGAGCGAGCTTTAACGT 34394
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 61 ACAAGGTGATTGACCAAAATCGAAGTTACGAACAAGAAAGCGTCGAGCGAGCTTTAACGT 120
Query 34395 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 34454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GCGCTAACTGCGGTCAGAAGCTGCATGTGCTGGAAGTTCACGTGTGTGAGCACTGCTGCG 180
Query 34455 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGACGATGGCTAAACCA 34514
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 181 CAGAACTGATGAGCGATCCGAATAGCTCGATGCACGAGGAAGAAGATGATGGCTAAACCA 240
Query 34515 GCGCGAAGACGATGTAAAA 34533
|||||||||||||||||||
Sbjct 241 GCGCGAAGACGATGTAAAA 259
>seq237313
Length=339
Score = 217 bits (240), Expect = 4e-52
Identities = 185/230 (80%), Gaps = 21/230 (9%)
Strand=Plus/Plus
Query 36721 ATGAGTAGAGTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 36780
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 86 ATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 145
Query 36781 TGGGCTGTTAATCATTACCGTGATAACGCCATGACCTACAAAGAACAGCGCGACAAA--- 36837
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 146 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAAT 205
Query 36838 GCCACA----TCCATC--------------ATCGCTGACATGCAGAAGCGTCAACATGAT 36879
|||| | | | | || |||||||||||| |||||| | ||||
Sbjct 206 GCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGAT 265
Query 36880 GTAGCTGAACTCGACGCCAGATACACAAAGGAGCTTGCTGATGCTAACGC 36929
|| |||| ||||| || | |||||| |||||| | ||||||||||| ||
Sbjct 266 GTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGC 315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 122376916088468
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |