Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_027398.1 Length=38742 Score E Sequences producing significant alignments: (Bits) Value seq237567 444 1e-120 seq237313 331 2e-86 seq237382 291 2e-74 >seq237567 Length=272 Score = 444 bits (492), Expect = 1e-120 Identities = 254/259 (98%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 35797 CTTCGTGAAAGCGGGTGACAGGAGGTTGCGCTAACAACCTCATGCCGTTTTGCCCGTGCA 35856 ||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||| Sbjct 14 CTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCGTTTTGCCCGTGCA 73 Query 35857 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 35916 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 74 TATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTTGTTCTATCAGTAA 133 Query 35917 TCGACCTTATTCCTAATTAAATAGAACAAATCCCCTTATTGGGGGTAAGACATGAAGATG 35976 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 134 TCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTTATTGGGGGTAAGACATGAAGATG 193 Query 35977 CCAGAAAAACATGACCTGTTAGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 36036 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 194 CCAGAAAAACATGACCTGTTGGCCGCCATTCTCGCGGCAAAGGAACAAGGCATCGGGGCA 253 Query 36037 ATCCTTGCGTTTGCAATGG 36055 ||||||||||||||||||| Sbjct 254 ATCCTTGCGTTTGCAATGG 272 >seq237313 Length=339 Score = 331 bits (366), Expect = 2e-86 Identities = 260/315 (83%), Gaps = 21/315 (7%) Strand=Plus/Plus Query 36663 CTGGTTATGGTCAGTTCGAGCATAAGGCTGACAGCCTGATTGCAAAATTCAAAGAAGCTG 36722 |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | Sbjct 1 CTGGTTATGGTCAGTTCGAGCAAAAGGCTAACAGCCTGATTGCAAAATTCAAAGAAGCGG 60 Query 36723 GCGGAACGGTCAGAGAGATTGAGGTATGAGCAGAGTAACTGCGATTATCTCCGCTCTGGT 36782 |||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||| Sbjct 61 GCGGAACGGTCAGAGAGATTGATGTATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGT 120 Query 36783 TATCTGCATCATCGTCAGCCTGTCATGGGCTGTTAATCATTACCGTGATAATGCAATCGC 36842 |||||||||||||||| |||||||||||||||||||||||||||||||||| || || | Sbjct 121 TATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACGCCATTAC 180 Query 36843 CTACAAAGAGCAGCGCGATAAA---GCCACA------------------TCCACAATCGC 36881 |||||||| |||||||| ||| |||| | | |||| | Sbjct 181 CTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTAC 240 Query 36882 TGACATGCAGAAGCGTCAACGTGATGTAGCAGAACTTGACGCCAGATACACAAAGGAGCT 36941 ||||||||||| |||||| |||||||| || | || || || | |||||| |||||| | Sbjct 241 TGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTT 300 Query 36942 TGCTGATGCTAACGC 36956 ||||||||||| || Sbjct 301 AGCTGATGCTAAAGC 315 >seq237382 Length=259 Score = 291 bits (322), Expect = 2e-74 Identities = 164/166 (99%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 33322 AAGAAAGCGTCGAGCGGGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 33381 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 94 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 153 Query 33382 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 33441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 154 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 213 Query 33442 ACGAGGAAGAAGACGATGGCTAAACCAGCGCGAAGACGATGTAAAA 33487 ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 214 ACGAGGAAGAAGATGATGGCTAAACCAGCGCGAAGACGATGTAAAA 259 Score = 104 bits (114), Expect = 6e-18 Identities = 59/60 (98%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 32820 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACATCGTGCGAGGAAA 32879 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1 ACCTTCAACTACACGGCTCACCTGTGGGATATCCGGTGGCTAAGACGTCGTGCGAGGAAA 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123503328734272