Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq32346 98.7 8e-16
seq20520 93.3 3e-14
seq44030 84.2 2e-11
>seq32346
Length=5591
Score = 98.7 bits (108), Expect = 8e-16
Identities = 141/197 (72%), Gaps = 4/197 (2%)
Strand=Plus/Minus
Query 43796 GACTTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTAT--ATCTTTGGTTT 43853
||||||||| ||||| |||||||| || ||||||||||| | | | || |
Sbjct 4029 GACTTAGCAGATTGGGAGACATTAAAAGATTGTGAGAAACATTTTATCAAGCAT--GTCT 3972
Query 43854 TGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGC 43913
| || || ||||| || || || || || ||||| || ||||| || ||| | |
Sbjct 3971 TAGCATTCTTTGCGGCTTCTGATGGTATTGTTAATGAGAACTTGGTGGAGCGTTTTTCAC 3912
Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973
|||| |||||| | | ||||| | || || ||||| ||||||||||| || ||||||
Sbjct 3911 AAGAGGTTCAAGTGACTGAAGCCAGGTGCTTCTATGGTTTTCAAATTGCTATGGAAAATG 3852
Query 43974 TTCATTCGGAAATGTAC 43990
||||||| || ||||||
Sbjct 3851 TTCATTCAGAGATGTAC 3835
>seq20520
Length=7881
Score = 93.3 bits (102), Expect = 3e-14
Identities = 109/145 (75%), Gaps = 2/145 (1%)
Strand=Plus/Minus
Query 115031 AATGGTCATACGTGAAGGAAAAGCATGCGGATTAATAATCAAGTCTGGCACTAACCCGTC 115090
||| |||||||| ||||| | ||||| ||||||||||| | ||||| ||| || ||
Sbjct 5442 AATTGTCATACGAGAAGGGATGGCATGGGGATTAATAATGATATCTGGTGTTAAGCCCTC 5383
Query 115091 GGCTGTGAACGGCATGTCGTGCTGATCG-TACATCATTCCACAAGTTCCTTTTTGAGCGG 115149
| ||| |||||||| || | || ||| ||| |||||||| |||||||||||| ||
Sbjct 5382 GCATGTAAACGGCATATCTTCTTG-TCGATACTGGATTCCACAGGTTCCTTTTTGACCGT 5324
Query 115150 TAAACGATGCAAATTTATCACCAAT 115174
| || ||||| ||||| |||||
Sbjct 5323 GACGAGAAGCAAACTTATCTCCAAT 5299
>seq44030
Length=2498
Score = 84.2 bits (92), Expect = 2e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
|||||||||||||||||||| |||| || | |||||||| ||| || |||| ||||
Sbjct 1424 CCCAAAATTGTAAATGGTCCACAAATTTTGGACAAATATGTCGGTGAAAGTGAAGCAAAT 1365
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACG 19529
| | | ||||||||||| || ||||||||| | |||||
Sbjct 1364 ATTAGGAGATTGTTTGCTGATGCCGAAGAAGAAGAGAAACG 1324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396304998972070
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |