Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq24004 150 2e-31 >seq24004 Length=11461 Score = 150 bits (166), Expect = 2e-31 Identities = 476/729 (65%), Gaps = 24/729 (3%) Strand=Plus/Minus Query 110698 TCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTG 110757 |||||| |||| || |||| ||| | |||||||| ||||| | || || | ||||| Sbjct 9628 TCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTG 9569 Query 110758 TGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTT 110817 ||| || ||||| || ||||| || || ||||| ||| || || | ||| | | || Sbjct 9568 TGCAGTAGAGGCAGTCGGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTT--TT 9511 Query 110818 G--ATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTT---CCCAC 110872 | || ||| || || ||| ||||||| | || | || | || ||||| Sbjct 9510 GCTATCTTTTCTTTAAGGACAGCCCAGTCCCAA---AGGTCTGTAGGAGTTTTGTCCCAC 9454 Query 110873 ATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCT 110932 || ||| |||| || | |||||| || ||| || | | | || || | |||| Sbjct 9453 ATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCT 9394 Query 110933 TGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATA 110992 | |||||| |||||||| || || || | | | | ||| || |||||||| || Sbjct 9393 TCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATT 9334 Query 110993 CGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCA-CAAAATAAATAC 111051 | ||| | | |||| || || | | || || ||| | ||| | Sbjct 9333 TGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGA-TATTCTCATCAACACAAACGC 9275 Query 111052 ATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGC 111111 ||| || | || |||||||| | |||||||||||| |||| |||||| || || || Sbjct 9274 ATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGC 9215 Query 111112 AGTCTCA---ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAAT 111168 ||| || ||||||||||| ||||| ||| ||||| ||||| || ||||| Sbjct 9214 T---TCAGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAAT 9158 Query 111169 CTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTT 111228 |||||||||||| | | ||||| | ||| ||| || | | |||| ||| || | Sbjct 9157 CTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTG---TTATTTTCA---ACAAACAT 9104 Query 111229 TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAA 111288 ||| || || || || | ||||| || ||| ||||| | ||||| | | Sbjct 9103 GTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCAC 9044 Query 111289 AATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTT 111348 || || || || | ||| || ||||| || || | ||| ||||| |||||||| | Sbjct 9043 AACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCT 8984 Query 111349 GTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAAT 111408 ||| || |||||||| || | |||||| || || || |||||| || | || | ||| Sbjct 8983 GTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAAT 8924 Query 111409 AGCCTTCCA 111417 | |||||| Sbjct 8923 TGACTTCCA 8915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626166635054400