Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq24004 122 1e-22 >seq24004 Length=11461 Score = 122 bits (134), Expect = 1e-22 Identities = 466/722 (65%), Gaps = 30/722 (4%) Strand=Plus/Minus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || ||||| | || | || ||||| | ||| |||| || | ||||| || || ||| Sbjct 9618 TAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAG 9559 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT-TTTCCCTAATGCGTTC 118300 || || ||||| || || || | || || || | ||| | ||| ||| | ||| Sbjct 9558 GCAGTCGGCATAGGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTA-TCTTTTC 9500 Query 118301 CTTGAG---AGC---GTCCCA---GTC-GTAGTTGAGCTTTGTCTCCCCCTGCCACATAT 118350 || || ||| |||||| ||| |||| ||| |||||| |||||||| Sbjct 9499 TTTAAGGACAGCCCAGTCCCAAAGGTCTGTAG--GAGTTTTGTC--------CCACATAT 9450 Query 118351 CAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAA 118410 || ||||||||||||||||| ||||| || | | |||| |||| || || Sbjct 9449 CATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTT 9390 Query 118411 CCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAG 118470 || || ||||| | || || || | || | | ||| ||||||||||| || | Sbjct 9389 TTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTT 9330 Query 118471 CATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCG 118530 ||| | | || | || || | | | || ||| | ||| |||| | Sbjct 9329 GATTGAGAAGTATTGCTTTCTCACTTTCGTAAGATATTCTCATCAACACAAACGCATCTG 9270 Query 118531 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT 118590 | | || || ||||| | ||||| || | |||||||||||| || | || Sbjct 9269 CCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCTTCAG 9210 Query 118591 CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 118650 || ||||||||||| ||| ||||| | |||| ||||| || |||| |||||||| Sbjct 9209 GGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGA 9150 Query 118651 TTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGG 118710 |||| | | |||| ||| ||| ||| | | |||| ||| || | ||| | Sbjct 9149 TTTCTTTTAATTTTTTAAAATTAAATCTG---TTATTTTCA---ACAAACATGTTAAGTG 9096 Query 118711 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 118770 | || || || || || ||||| | ||||| | |||||| | | || || | Sbjct 9095 CTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAG 9036 Query 118771 TGCACAAGTTTG-AACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 118829 |||| ||| ||| || ||||| ||||| | || |||||||| |||| ||||||| Sbjct 9035 TGCA-AAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAA 8977 Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889 |||||||| || | ||||||||| || || |||||| ||||| | | ||| | |||| Sbjct 8976 GCATCCTTATACAACATGTATGGTGTACCAGTCTCCACTTGGGCTTCTATAATTGACTTC 8917 Query 118890 CA 118891 || Sbjct 8916 CA 8915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 616598339229840