Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq24004 125 8e-24 >seq24004 Length=11461 Score = 125 bits (138), Expect = 8e-24 Identities = 234/343 (68%), Gaps = 12/343 (3%) Strand=Plus/Plus Query 104915 GAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 104974 ||||||||||||||||||||| | || || || || |||||| ||||||||||||||| Sbjct 8942 GAGACTGGTACACCATACATGTTGTATAAGGATGCTTGTAACAGAAAGAGTAATCAAAAA 9001 Query 104975 AATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAA 105034 ||| | || || || || |||||| || || || | || ||| || || Sbjct 9002 AATCTTGGCACTATTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACACTTCAGAA 9061 Query 105035 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 105094 ||||| ||| ||||| ||||| || || || || || || || ||| || Sbjct 9062 GATGAAGTGGCAGTGTGCAACCTTGCTTCCATAGCACTTAACATGTTTGT------TGAA 9115 Query 105095 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTA 105154 | || | |||| ||| | ||||| | | ||| | || || | ||| || |||| || Sbjct 9116 AATAACAGATTTAATTTTAAAAAATTAAAAGAAATCACAAAGATTGTAACTCAAAATTTA 9175 Query 105155 AACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATG 105211 |||| |||||||||| |||||||| || || ||| || | || |||||| Sbjct 9176 AACAAAGTTATTGATGTTAATTTTTATCCTGTCCCTGA---AGCAAAAACTTCAAATATG 9232 Query 105212 AGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATG 105254 ||||| | || |||||| | ||||||||||| | || |||| Sbjct 9233 AGACATAGACCTATTGGTATTGGTGTTCAGGGCATGGCAGATG 9275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581528413353360