Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq31223 102 6e-17
seq53127 100 2e-16
seq207359 89.7 4e-13
seq88586 82.4 5e-11
>seq31223
Length=3647
Score = 102 bits (112), Expect = 6e-17
Identities = 163/232 (70%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|||||||| || ||||||||||| ||||| || ||| ||||| | || || |||
Sbjct 732 AAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCT 673
Query 27847 ACCG--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
||| || || | ||| || ||| ||||| ||||| ||||| |||| |
Sbjct 672 TCCGATACTATTGAAAAT--GTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAG 615
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||||| || ||||| || ||||| |||||||| |||| ||||| | || || |
Sbjct 614 ATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACT 555
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
| || || |||||||| ||| | || ||||| |||||| | ||||| ||
Sbjct 554 ATAATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGTGGTGG 503
Score = 86.0 bits (94), Expect = 4e-12
Identities = 152/220 (69%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||||||||| ||||| || ||||| ||| ||||| | || || ||| |
Sbjct 273 ATGCAAATTTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 214
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || | ||| || ||| ||||| ||||||||||| |||| || |
Sbjct 213 GACACAATTGAAAAT--GTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATC 156
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||||| | |||||||| || || ||||| || || | || | |||| || || |
Sbjct 155 AACAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTATA 96
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTT 28007
||||||||||||| |||||||| || || | |||||
Sbjct 95 ACATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTT 56
>seq53127
Length=7988
Score = 100 bits (110), Expect = 2e-16
Identities = 154/218 (71%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||||||||||||||| | ||||||||| ||| || | || || ||| |
Sbjct 6966 ATGCAAATTTTTGTGAAAACATTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCT 7025
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| | || | ||| || || ||| || ||||| ||||| |||| || |
Sbjct 7026 GATACAATAGAAAAT--GTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACC 7083
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||| | | ||||| |||||||| ||| |||| || | ||||| ||||| || || |
Sbjct 7084 AACAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACATTGTCAGACTATA 7143
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGT 28005
| ||||| || ||| ||||||||||| |||||||||
Sbjct 7144 ATATCCAGAAGGAGTCTACTTTGCATTTAGTTTTGCGT 7181
Score = 82.4 bits (90), Expect = 5e-11
Identities = 150/218 (69%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848
||||||||| ||||| || || || ||||| ||| ||| ||| | || || ||| |
Sbjct 6053 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTC 6112
Query 27849 CGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906
|| | || | ||| || || |||||| ||||||||||| |||| ||
Sbjct 6113 TGATACAATAGAAAAT--GTTAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCTGAC 6170
Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966
|| || || | |||||||| |||||||| |||| || | ||| | |||| |||||
Sbjct 6171 CAACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTAT 6230
Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCG 28004
|| || ||||| || |||||||| ||||| ||||
Sbjct 6231 AATATTCAAAAGGAATCTACTTTGCACTTGGTGCTGCG 6268
>seq207359
Length=487
Score = 89.7 bits (98), Expect = 4e-13
Identities = 153/220 (70%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| ||||| ||||| || ||||| ||| ||||| | || || ||| |
Sbjct 215 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 274
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || | ||| || ||| ||||| ||||||||||| |||| ||| |
Sbjct 275 GACACAATTGAAAAT--GTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATC 332
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||||| | |||||||| || || ||||| || || | || | |||| || ||||
Sbjct 333 AACAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACA 392
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTT 28007
||||||||||||| |||||||| || || | |||||
Sbjct 393 ACATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTT 432
>seq88586
Length=4530
Score = 82.4 bits (90), Expect = 5e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848
|||||||||||| || || || ||||| || ||| ||||| | || || || | |
Sbjct 2406 AATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTC 2347
Query 27849 CGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCA 27908
|| | || || || ||| ||||| || || |||||| |||| || ||
Sbjct 2346 TGATACTATAGAAAATGTTAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCA 2287
Query 27909 GCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAA 27968
|||||| || || ||||| || |||||| | || || | ||| | ||||| || |||||
Sbjct 2286 GCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAA 2227
Query 27969 CATCCAAAAAGAGAGCACTTTGCAT 27993
||| ||||| || ||| ||||||
Sbjct 2226 CATTCAAAAGGAATCCACATTGCAT 2202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354831850736178
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |