Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq53127 143 6e-29 seq44559 143 6e-29 seq88586 138 3e-27 seq207359 134 3e-26 seq31223 132 1e-25 seq158 122 2e-22 >seq53127 Length=7988 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| | ||| ||||| || |||| ||| || || | || || | ||||||||| | || Sbjct 5801 GTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGACAGTGTGCGCCCATCTTCCAATTG 5742 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| || ||||| || |||| |||||| || || || || |||||||||||||| ||||| Sbjct 5741 CTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAGGGATGCCTTCCTTGTCTTGAATCTT 5682 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 | ||| || |||||| || || || | |||||| || || ||||| || || || || Sbjct 5681 TGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGT 5622 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 |||||||||| ||| | |||||| Sbjct 5621 TAAAGTTTTTACGAAGATTTGCAT 5598 Score = 141 bits (156), Expect = 2e-28 Identities = 150/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225516 AGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCC 225575 ||| || || || |||| ||| || || | ||| || | |||||||| || ||||| || Sbjct 7163 AGTAGACTCCTTCTGGATATTATAGTCTGACAATGTGCGTCCATCTTCCAGTTGCTTTCC 7104 Query 225576 AGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTT 225635 ||||| || |||| ||||||||| || ||||| |||||||||||||| |||||| ||| Sbjct 7103 GGCGAAAATCAGTCTTTGTTGGTCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTT 7044 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 ||| ||| || || || || | |||||| || || ||||| || || || ||||| || Sbjct 7043 AACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAATGT 6984 Query 225696 TTTTATGAACACTTGCAT 225713 ||| | || | |||||| Sbjct 6983 TTTCACAAAAATTTGCAT 6966 >seq44559 Length=2984 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| | |||||| ||||| || | |||||| || | | ||| | ||||| || ||||| Sbjct 1095 GTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAGAGAGTACGGCCATCCTCCAGCTG 1036 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| |||||||| || || |||||||| || || |||||||| || |||||||||||||| Sbjct 1035 CTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTT 976 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || ||| ||| || |||||||||| ||| || ||||| ||||| || || || || Sbjct 975 GGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTCCCTGT 916 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 || || |||| || | ||||| Sbjct 915 CAGTGTCTTTACAAAGATCTGCAT 892 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || ||||| ||||| |||| |||||| || | || || | |||||| Sbjct 875 AGTACCAAGTGAAGGGTGGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCT 816 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| |||||||||||||| |||||||| || || ||||| |||||||| ||| Sbjct 815 TCCAGTTGCTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCT 756 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| || ||| ||| ||||||||||| | || || || || || || || Sbjct 755 TGAATCTTAGCTTTAACATTTTCAATGGTGTCTGAAGGCTCAACTTCCAAAGTTATTGTT 696 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || || | ||||| | || | ||||||| Sbjct 695 TTTCCAGTAAGTGTTTTGACAAATATTTGCATT 663 Score = 138 bits (152), Expect = 3e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || | || || || || |||||||||| ||||| || | || || Sbjct 428 CGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTG 369 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||||||||||||||| ||||| |||||||| |||||||| || || |||||||| Sbjct 368 CGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCC 309 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || || ||||| ||||| ||| ||| ||| |||||||| || | ||||| || | Sbjct 308 TCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACCTCCAGA 249 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| || | || || | || | |||||| Sbjct 248 GTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 208 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | || | ||| ||||||||||||| || || || | | ||| Sbjct 1341 ACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGATAGAGT 1282 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| |||| ||| || ||||| ||||| || || |||||||| || ||||| || Sbjct 1281 GCGGCCATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCC 1222 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| ||| ||| |||||| ||||| || | ||||| || || Sbjct 1221 CTCCTTGTCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAA 1162 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| ||||| || || | ||| || Sbjct 1161 AGTGATGGTCTTCCCAGTAAGAGTCTT 1135 Score = 102 bits (112), Expect = 2e-16 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || || || || || || || ||||||| ||||| || | || || Sbjct 200 CGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGACAGGGTG 141 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||||| | ||||| ||||| |||||||| || || || || || || || || Sbjct 140 CGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCC 81 Query 225613 TCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || ||||||||||| ||| || || ||| ||| || || || |||| |||||| || | Sbjct 80 TCTTTGTCTTGGAT-TTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAG 22 Query 225672 CGTGATCGTCTTGCCCGT 225689 || || ||||| || || Sbjct 21 GGTAATGGTCTTTCCAGT 4 >seq88586 Length=4530 Score = 138 bits (152), Expect = 3e-27 Identities = 166/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||||| || ||||| || | |||||||| ||||| | ||||| || | ||| || Sbjct 2185 CGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTA 2244 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||||||||| || || ||||| ||||| | ||||| ||||| || ||||||||| Sbjct 2245 CGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCT 2304 Query 225613 TCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| |||||||| ||| || || ||| ||| || || || |||| ||||| || | Sbjct 2305 TCCTTATCTTGGAT-TTTAGCTTTAACATTTTCTATAGTATCAGAGGCCTCCACCTCGAG 2363 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || || || ||||| | || || | ||| | ||||||| Sbjct 2364 GGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 2406 >seq207359 Length=487 Score = 134 bits (148), Expect = 3e-26 Identities = 159/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| | ||| ||||||||||||| ||||| || | || || | |||||| Sbjct 426 AGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTACGACCATCT 367 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 |||| ||||| || || || ||||| |||||||| || || ||||| ||||| |||||| Sbjct 366 TCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCT 307 Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||| ||| || |||||| ||| || ||||| || | ||| || ||||| || || || Sbjct 306 TGGAT-TTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGT 248 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||||| | || | |||||| Sbjct 247 TTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 215 Score = 122 bits (134), Expect = 2e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | || || || ||||| ||||| | ||| ||||| | || || Sbjct 208 ACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGT 149 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || || || |||||||| || || | ||||| || || |||||||| Sbjct 148 ACGGCCATCTTCCAGTTGTTTTCCAGCGAAAATCAGCCTCTGTTGATCTGGGGGAATACC 89 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || ||||||||||||||| ||||||| |||||| ||||| || | ||| || || | Sbjct 88 CTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGTTCTACCTCAAG 29 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 || || || || || || | ||| || Sbjct 28 AGTAATGGTTTTTCCTGTAAGAGTCTT 2 >seq31223 Length=3647 Score = 132 bits (146), Expect = 1e-25 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | || || || ||||| ||||| | ||| ||||| | || || Sbjct 280 ACGAAGCCGCAATACTAAATGTAGGGTCGATTCCTTTTGAATATTATAATCAGATAATGT 339 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || || || ||||| || ||||| | ||||| || || |||||||| Sbjct 340 ACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACC 399 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || ||||||||||||||| ||||||| |||||| ||||| || | || || ||||| Sbjct 400 CTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACCTCTAA 459 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || || || || | ||| || | || | |||||| Sbjct 460 AGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 502 Score = 129 bits (142), Expect = 1e-24 Identities = 158/213 (74%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| | ||| ||||||||||||| || || || | || || | |||||| Sbjct 62 AGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTATAGTCAGACAGTGTACGACCATCT 121 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 |||| ||||| || || || ||||| |||||||| || || ||||| ||||| |||||| Sbjct 122 TCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCT 181 Query 225622 TGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||| ||| || |||||| ||| || ||||| || | ||| || ||||| || || || Sbjct 182 TGGAT-TTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGT 240 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||||| | || | |||||| Sbjct 241 TTTTCCAGTGAGTGTTTTAACAAAAATTTGCAT 273 Score = 122 bits (134), Expect = 2e-22 Identities = 164/226 (73%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| ||||| ||||||||||| | ||| || || | | ||| Sbjct 508 ACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGT 567 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| | ||||| |||||||| || | |||||||| || || ||||| || Sbjct 568 GCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCC 627 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 |||||||||||| || ||| || || ||| ||| || || || || | ||| || || | Sbjct 628 TTCCTTGTCTTGAAT-TTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCA 686 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 | || || || || ||||| | ||||| | || | |||||||| Sbjct 687 AAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 732 >seq158 Length=20736 Score = 122 bits (134), Expect = 2e-22 Identities = 135/180 (75%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611 ||| |||| || |||| |||| || ||||| ||| |||| ||||| ||| | ||||| Sbjct 17336 CAAATTTATAATACTATTGTTACAGCTCATGCTTTTATTATAATTTTTTTTATAGTTATA 17277 Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671 || |||| || || || || ||||||||||| || || ||||| | || ||||||||| Sbjct 17276 CCTATTATAATTGGGGGATTTGGAAATTGATTAGTACCATTAATATTAGGAGCTCCTGAT 17217 Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 || |||||||| | | || |||||||| |||||| | |||| || || ||| || || Sbjct 17216 ATAGCTTTTCCTCGAATAAATAATATAAGATTTTGACTTTTACCCCCATCATTAATTTTA 17157 Score = 114 bits (126), Expect = 3e-20 Identities = 87/103 (84%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| ||||||||| ||||||||||| |||||||||||||| | |||||||| ||||| | Sbjct 16760 ATACTTCAGGATGTCCAAAAAATCAAAATAAATGTTGATATAAAATAGGATCACCTCCTC 16819 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||| ||||||||||| ||||| ||||||| ||||||||| Sbjct 16820 CTGCAGGATCAAAAAATGATGTATTTAAATTTCGATCAGTTAA 16862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1188900622984116