Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_030240.1
Length=128058
Score E
Sequences producing significant alignments: (Bits) Value
seq21383 219 3e-52
seq53127 105 5e-18
seq31223 100 2e-16
seq207359 96.9 3e-15
seq44559 93.3 3e-14
>seq21383
Length=8822
Score = 219 bits (242), Expect = 3e-52
Identities = 635/966 (66%), Gaps = 21/966 (2%)
Strand=Plus/Plus
Query 109141 GCGTACTTTGTCGAATGGGGTGTGTACGGCCGCAATTTTCCCGTGGACAAAGTGCCGTTG 109200
|| ||||| || ||||||||||| || | || || |||||||| | || |
Sbjct 1094 GCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTATA 1153
Query 109201 CCCAATTTATCGCATTTGCTGTACGGTTTTATTCCAATATGTGGCGGCGACGGCATCAAC 109260
|| ||| | | |||||||| ||||| ||||||||||| || ||||| |||||||||||
Sbjct 1154 CCTAATCTTACTCATTTGCTCTACGGCTTTATTCCAATTTGCGGCGGTGACGGCATCAAT 1213
Query 109261 GACGCCCTCAAAACCATTCCCGGCAGTTTTGACGCTTTGCAACGATCGTGCCGCGGTCGC 109320
|| | ||| || |||||||| | || | || ||||| || |||| ||
Sbjct 1214 GATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGATCCTGTAGCGGCCGT 1273
Query 109321 GACGATTTCAAAGTGTCCATACACGACATTTGGGCCGCGGTGCAAAAACCGCAAAAAGGC 109380
|| || |||||||| || || ||||| ||||| || | |||||||| ||||||||
Sbjct 1274 GAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGA 1333
Query 109381 GTGACCGCGTGGAACGAGCCGTACAAAGGCAACTTTGGACAATTGATGGCGGCCAAATTG 109440
|| | | ||||||||||| ||||||||||||||||| ||||| ||| | |||
Sbjct 1334 TTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAA 1393
Query 109441 GCAAATCCTCACGTTAAAATTCTACCGTCCATAGGCGGGTGGACG-TTGTCGGACCCGTT 109499
|| ||| | | || ||||| || || || || ||||||||| ||| || || |
Sbjct 1394 GCCCGCCCTGAATTGAAGATTCTTCCATCTATTGGTGGGTGGACGCTTGCCGATCCTTTC 1453
Query 109500 TTATTTT--ATGCACGATTCGGCGAAAAGAGCCACATTCGTTGAATCGGTGCGCGAATTT 109557
|| |||| | || | | | || ||| | ||| || | || || || |||
Sbjct 1454 TTCTTTTTAGTTGACAAAT---CTAAGAGAACACGATTTGTGCAGTCAGTAAAGGAGTTT 1510
Query 109558 TTACAAGTGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTTCCGGGCGGCAAG 109617
| | | ||||||||||| || || || || || ||||||||||| || || |||||
Sbjct 1511 CTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAAA 1570
Query 109618 GGTGCCAATCCGAGTCTCGGCGACGCA-ACGCGCGACAGCAAAACGTACATTGCGTTGTT 109676
||||| || || ||||| | || | | | | | ||| | ||| |
Sbjct 1571 GGTGCTAACCCTGACCTCGGTAGCCCAGAAGATGGTGATTGTTATGTAAGT----TTGAT 1626
Query 109677 AAAAGAGTTGCGCGCCATGTTGGACGACTTGCAAACGGCCACCAA---CAAAACGTACGA 109733
||||| || || | ||| |||| || || | || | || || | |||||
Sbjct 1627 GAAAGAATTACGTGAGATGCTGGATGA---GCTCTCAGCTAAGAATGGTAAGAAATACGA 1683
Query 109734 ATTGACGAGCGCCATTAGCGCCGGTTACGATAAAATTGACGTGGTCGATTACGCGTCGGC 109793
||| || || ||||| || || | |||||||| | || || || |||| ||
Sbjct 1684 ATTAACTTCTGCTATTAGTGCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAAGC 1743
Query 109794 GCAACAATATTTGGACAAAATATTTTTAATGACATACGATTTCAAAGGCGCTTGGTCAAA 109853
||| | ||| |||| | || || || |||| ||||| ||||| || || ||||||||
Sbjct 1744 TCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTCAAA 1803
Query 109854 CACGGACT-TAGGCTATCACACGACTGTGTACGCGCCCACGTGGAATCCAAACGAATTGT 109912
||| | || |||| ||| | |||||||||| |||||||||| || ||| |
Sbjct 1804 -TGATACTCTTGGACATCAAACGCCATTGTACGCGCCTGCGTGGAATCCCAAGGAAACTT 1862
Query 109913 ACACGACCGATGTGGCGGTCAAAGAGCTGTTCAAACAAAAAGTGTCGCCTaaaaaaaTTA 109972
|||| | || | | || ||| | || | || |||| ||||| || |||
Sbjct 1863 ACACATCTGACTTTGGAGTAAAATACTTGCTGGCGCAGGGAGTGAATCCTAAGAAGATTG 1922
Query 109973 TAATTGGCGTAGCGATGTACGGCCGCGGCTGGACGGGCG-TCGTGCACGCCGACGACGCG 110031
|| | || || || ||||| || || || ||||| |||| || || | | | |||
Sbjct 1923 TAGTAGGTGTTGCTATGTATGGTCGTGGTTGGACTGGCGTTCATG-ATTACAAAGACAAC 1981
Query 110032 AATCCGTTTTTGGGCATCGCCTCCGGTCCCGTGGAAGGCACTTGGGAAAACGGCGTGGTG 110091
| ||| || |||| ||| | || || || |||| |||||| || |||| |||||
Sbjct 1982 ATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGGAGTGGTT 2041
Query 110092 GACTAT 110097
||||||
Sbjct 2042 GACTAT 2047
>seq53127
Length=7988
Score = 105 bits (116), Expect = 5e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088
||||| ||||||||| ||||| ||||||||||| ||||| | || || ||||||
Sbjct 6263 CACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCTGACAGTGTACGTCCATCTTC 6204
Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148
|| ||||| || ||| | |||||||| |||||||| || | ||||||||||||
Sbjct 6203 CAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGAATGCCTTCTTTGTCTTG 6144
Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTT 101208
||||||| || |||| | | || || | | ||| | || ||||||||
Sbjct 6143 AATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTTTT 6084
Query 101209 GCCCGTCAATGTTTTAATAAAAATTTGCATT 101239
||| |||| ||| || | ||| |||||||||
Sbjct 6083 GCCAGTCAGTGTCTTTACAAATATTTGCATT 6053
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071
|| |||| || | || || | ||||||||| |||||||| ||||| |||||||| |
Sbjct 6052 CCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAG-- 5995
Query 101072 ATAGTTTTGGA--ATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGG 101129
||||| | | |||||| | || || || ||| | ||||| ||||| || ||| ||
Sbjct 5994 ATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 5935
Query 101130 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTG 101189
| | || ||||| || ||||||| ||| |||| | | || || | | |
Sbjct 5934 GAATTCCCTCTTTATCCTGAATTTTTGCTTTAACATTTTCAATTGTATCAGAAGGCTCAA 5875
Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239
||| | || ||||| ||||| |||| ||| || | ||||||||||||
Sbjct 5874 CTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCATT 5825
Score = 82.4 bits (90), Expect = 6e-11
Identities = 143/206 (69%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGA--ATCTTCCAATT 101093
|| ||||| |||||||| ||||||||||| || | ||||| | | ||| || | |
Sbjct 6940 TGTAAAGTAGATTCTTTCTGAATATTGTAGTCAG--ATAGTGTACGTCCATCCTCAAGCT 6883
Query 101094 GTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTT 101153
| || || ||| | |||||||||||||||||| || | |||||| || || |||||
Sbjct 6882 GCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTATCTTGAATTT 6823
Query 101154 TTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCG 101213
| || |||| | | || || | || | ||| | || ||||| ||||| |
Sbjct 6822 TCGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCTTGCCAG 6763
Query 101214 TCAATGTTTTAATAAAAATTTGCATT 101239
||| ||| || | ||| |||||||||
Sbjct 6762 TCAGTGTCTTTACAAATATTTGCATT 6737
>seq31223
Length=3647
Score = 100 bits (110), Expect = 2e-16
Identities = 147/206 (71%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 101035 GTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGA--ATCTTCCAAT 101092
||||||||| ||||||||||| || || || || | | ||| | || |||||| |||
Sbjct 70 GTGCAAAGTAGATTCTTTTTGGATGTTATAGTCAG--ACAGTGTACGACCATCTTCTAAT 127
Query 101093 TGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATT 101152
|| ||||||||| | ||||| | |||||| ||| || | |||||||||||| |||
Sbjct 128 TGCTTGCCCGCAAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATT 187
Query 101153 TTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCC 101212
|| |||||||| | | || || | | ||| | ||||| ||||| ||
Sbjct 188 TTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGTTTTTCCA 247
Query 101213 GTCAATGTTTTAATAAAAATTTGCAT 101238
|| | |||||||| ||||||||||||
Sbjct 248 GTGAGTGTTTTAACAAAAATTTGCAT 273
>seq207359
Length=487
Score = 96.9 bits (106), Expect = 3e-15
Identities = 146/206 (71%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 101035 GTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGA--ATCTTCCAAT 101092
||||||||| ||||||||||| || ||||| || | || || | || |||||| |||
Sbjct 418 GTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGACA--GTGTACGACCATCTTCTAAT 361
Query 101093 TGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATT 101152
|| ||||||||| | ||||| | |||||| || || | |||||||||||| |||
Sbjct 360 TGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCTTGGATT 301
Query 101153 TTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCC 101212
|| |||||||| | | || || | | ||| | ||||| ||||| ||
Sbjct 300 TTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGTTTTTCCA 241
Query 101213 GTCAATGTTTTAATAAAAATTTGCAT 101238
|| | |||||||| ||| ||||||||
Sbjct 240 GTGAGTGTTTTAACAAAGATTTGCAT 215
>seq44559
Length=2984
Score = 93.3 bits (102), Expect = 3e-14
Identities = 149/212 (70%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088
||| | ||||| ||||| ||||| |||||||||||||| | || ||| ||||||
Sbjct 645 CACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCTTC 586
Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148
|||||| || || ||| | || || | ||||||||| ||| | ||| || || ||
Sbjct 585 CAATTGCTTTCCAGCAAAAATGAGACGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTG 526
Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGT--TTCGACGGTAATAGTT 101206
||||| ||| |||| | | || || | | ||| | ||| | |||||| ||
Sbjct 525 TATTTTAGCTTTGACATTCTCGATTGTGTCAGATG--GTTCTACTTCCAGGGTAATGGTC 468
Query 101207 TTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238
|| || ||||||||||| | ||| ||||||||
Sbjct 467 TTTCCAGTCAATGTTTTGACAAATATTTGCAT 436
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071
|| ||||| || | ||| |||| ||||||||| || ||||| ||||||||||| || |
Sbjct 1118 CCTCCTCGTAAACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 1059
Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131
| ||| | ||| |||| || ||||| || | || || | |||||| ||| |||
Sbjct 1058 AGAGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 999
Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--G 101189
| || |||||||| || || ||| |||| | | || |||| || |||
Sbjct 998 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGG--GTTCAA 941
Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238
||| | || |||||||| || |||| ||| || | ||| || |||||
Sbjct 940 CTTCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408474454840026
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