Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq32346 82.4 7e-11 >seq32346 Length=5591 Score = 82.4 bits (90), Expect = 7e-11 Identities = 167/244 (68%), Gaps = 7/244 (3%) Strand=Plus/Plus Query 4552 CAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGG 4611 |||||| || | || |||| | || || ||| ||||| ||| || || ||||||| Sbjct 2962 CAAAATTACGAAACATACCT-CATCCCTAGAAATAAGTTCATTACTGAAAGTCAATCCGG 3020 Query 4612 GCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGC 4671 |||| | ||||| ||||| | ||||||||| | ||||| || || || ||||| | Sbjct 3021 GCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTC 3080 Query 4672 CTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTT--TGTCTTTAA 4728 | || || || ||||| || | || || || || | ||||| ||| || | | Sbjct 3081 CCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAATGTAGCTGTCTTGCTGCC---GA 3137 Query 4729 TCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAA 4788 |||| | ||| ||||||| || || |||||||| || || | || | || || || | Sbjct 3138 TCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATGGTAGAGTTTCAATTGCATTGA 3197 Query 4789 ATAA 4792 |||| Sbjct 3198 ATAA 3201 Score = 82.4 bits (90), Expect = 7e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 5042 TAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAAT 5101 ||| || |||||||| ||||||||||||| ||||| |||||||| ||||| ||| || Sbjct 4163 TAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGCCATAT 4222 Query 5102 ATCAGGATACTGAATCGGAAGTATGACAAA 5131 ||| ||||| || || || | ||| ||||| Sbjct 4223 ATCTGGATATTGGATTGGGAATATAACAAA 4252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425812898255462