Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_030919.1 Length=42418 Score E Sequences producing significant alignments: (Bits) Value seq237313 334 2e-87 seq237567 280 4e-71 seq237382 223 9e-54 >seq237313 Length=339 Score = 334 bits (370), Expect = 2e-87 Identities = 223/248 (90%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 21561 ATGAGCAGAGTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 21620 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 86 ATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 145 Query 21621 TGGGCTGTTAATCATTACCGTGATAATGCAATCGCCTACAAAGAGCAGCGCGATAAAAAA 21680 |||||||||||||||||||||||||| || || ||||||||| |||||||| ||||| Sbjct 146 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAAT 205 Query 21681 GTCAGTGAACTGAAGCAGGCGACCGCCACCATTACTGACATGCAGCAGCGCCAGCGTGAT 21740 | ||| |||||||||| ||||| ||| | ||||||||||||||| ||| ||||||||| Sbjct 206 GCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGAT 265 Query 21741 GCTGATGCACTCGATGCTAAATACACGAAGGAGTTAGCTGATGCGAAAGCTGAAAATGAT 21800 | || ||| |||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct 266 GTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGCTGAAAATGAT 325 Query 21801 GCTCTTCG 21808 ||||| || Sbjct 326 GCTCTGCG 333 >seq237567 Length=272 Score = 280 bits (310), Expect = 4e-71 Identities = 173/183 (95%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 20700 TTCTACACATGACCTTCGTGAAAGCGGGTG-CAGGAGGTTACGCTAACAACCTCCTGCCG 20758 || ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 1 TTTTACACATGACCTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCG 60 Query 20759 TTTTGCCCGTGCATATCGGACACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 20818 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 61 TTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 120 Query 20819 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTCAATAAAGGGG 20878 ||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 121 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCT---TATTGGGG 177 Query 20879 GTA 20881 ||| Sbjct 178 GTA 180 >seq237382 Length=259 Score = 223 bits (246), Expect = 9e-54 Identities = 132/138 (96%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 17896 AAGAAAGCGTCGAGCGGGCTTTAACGTGCGCTAATTGCGGTCAGAAGCTGCATGTGCTGG 17955 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 94 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 153 Query 17956 AAGTTCACGTATGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCAATGT 18015 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 154 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 213 Query 18016 ACGAGGAAGAAGACGATG 18033 ||||||||||||| |||| Sbjct 214 ACGAGGAAGAAGATGATG 231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135233336909840