Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_030919.1
Length=42418
Score E
Sequences producing significant alignments: (Bits) Value
seq237313 334 2e-87
seq237567 280 4e-71
seq237382 223 9e-54
>seq237313
Length=339
Score = 334 bits (370), Expect = 2e-87
Identities = 223/248 (90%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 21561 ATGAGCAGAGTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 21620
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 86 ATGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCA 145
Query 21621 TGGGCTGTTAATCATTACCGTGATAATGCAATCGCCTACAAAGAGCAGCGCGATAAAAAA 21680
|||||||||||||||||||||||||| || || ||||||||| |||||||| |||||
Sbjct 146 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGCCCAGCGCGACAAAAAT 205
Query 21681 GTCAGTGAACTGAAGCAGGCGACCGCCACCATTACTGACATGCAGCAGCGCCAGCGTGAT 21740
| ||| |||||||||| ||||| ||| | ||||||||||||||| ||| |||||||||
Sbjct 206 GCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGAT 265
Query 21741 GCTGATGCACTCGATGCTAAATACACGAAGGAGTTAGCTGATGCGAAAGCTGAAAATGAT 21800
| || ||| |||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 266 GTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCTAAAGCTGAAAATGAT 325
Query 21801 GCTCTTCG 21808
||||| ||
Sbjct 326 GCTCTGCG 333
>seq237567
Length=272
Score = 280 bits (310), Expect = 4e-71
Identities = 173/183 (95%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 20700 TTCTACACATGACCTTCGTGAAAGCGGGTG-CAGGAGGTTACGCTAACAACCTCCTGCCG 20758
|| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 1 TTTTACACATGACCTTCGTGAAAGCGGGTGGCAGGAGGTCGCGCTAACAACCTCCTGCCG 60
Query 20759 TTTTGCCCGTGCATATCGGACACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 20818
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TTTTGCCCGTGCATATCGGTCACGAACAAATCTGATTACTAAACACAGTAGCCTGGATTT 120
Query 20819 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCTCAATAAAGGGG 20878
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 121 GTTCTATCAGTAATCGACCTTATTCCTAATTAAATAGAGCAAATCCCCT---TATTGGGG 177
Query 20879 GTA 20881
|||
Sbjct 178 GTA 180
>seq237382
Length=259
Score = 223 bits (246), Expect = 9e-54
Identities = 132/138 (96%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 17896 AAGAAAGCGTCGAGCGGGCTTTAACGTGCGCTAATTGCGGTCAGAAGCTGCATGTGCTGG 17955
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 94 AAGAAAGCGTCGAGCGAGCTTTAACGTGCGCTAACTGCGGTCAGAAGCTGCATGTGCTGG 153
Query 17956 AAGTTCACGTATGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCAATGT 18015
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 154 AAGTTCACGTGTGTGAGCACTGCTGCGCAGAACTGATGAGCGATCCGAATAGCTCGATGC 213
Query 18016 ACGAGGAAGAAGACGATG 18033
||||||||||||| ||||
Sbjct 214 ACGAGGAAGAAGATGATG 231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 135233336909840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |