Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq24004 605 4e-168
seq32346 107 3e-18
seq38285 86.0 9e-12
>seq24004
Length=11461
Score = 605 bits (670), Expect = 4e-168
Identities = 1217/1790 (68%), Gaps = 21/1790 (1%)
Strand=Plus/Minus
Query 76762 TTATTTTATTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGAT 76821
|||||||| || || | ||||||||||| | | | ||| |||||||| |||| |
Sbjct 10016 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 9957
Query 76822 AGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGG 76881
||||||| || ||||||| |||| |||| ||| |||||| || || |||||
Sbjct 9956 AGTACATTCCTGTTTTTAATCCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 9897
Query 76882 AATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTC 76941
||| |||| | || | ||| || || | || |||||||| || || ||||||||||
Sbjct 9896 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 9837
Query 76942 TATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTT 77001
||||||| ||||| | ||| || || | | ||| ||||| | |||||| | | |
Sbjct 9836 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 9777
Query 77002 GTTTGATATCATCTGGAAGGTTTGTATTTT---GAATGGAACCACCATCTGATATAATTG 77058
| | || || | |||| ||| | ||| | || || ||| | |||||||
Sbjct 9776 CTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAA 9717
Query 77059 TATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGAT 77118
||| || ||||| |||| |||||| | | || ||| | | || |||||| | |
Sbjct 9716 GATTTTTCATATCGTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGT 9657
Query 77119 TAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTT 77178
| |||| ||||||||||||| || ||||| | ||||||||| ||| | ||||
Sbjct 9656 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTT 9597
Query 77179 CCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCA 77238
| | ||||||| |||| || | |||||| |||||||| ||||| |||||||| || | ||
Sbjct 9596 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGAGCTATCA 9537
Query 77239 ATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAA 77298
||| | ||| | | ||||||| || || || ||||| || ||| |||||||
Sbjct 9536 ATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTAAGGACAGCCCAGTCCCAAA 9477
Query 77299 GATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATC 77358
| |||| ||| ||||| | ||| || || || || || | || || | ||
Sbjct 9476 GGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGC-TGGACTC 9418
Query 77359 CATT-ATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCT 77417
| || |||||| || | |||||| ||||||||| ||||||||| ||||| |||||
Sbjct 9417 CCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCA 9358
Query 77418 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAAC 77477
|| |||||||||||||| || || | | ||||||| | ||||| ||| || |
Sbjct 9357 CCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAA 9298
Query 77478 GGATAATGTAAAAGA-ATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCT 77536
| ||| | | | | | ||| |||||||| | |||||||| |||||||||||||||||
Sbjct 9297 G-ATATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCT 9239
Query 77537 ATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTT 77596
||||||| |||| ||| |||| ||||| || | ||||||| |||||| || |||| |||
Sbjct 9238 ATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTT 9179
Query 77597 ATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCC 77656
|| | |||| | || | || | || |||| ||| ||||| ||||||
Sbjct 9178 GTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCTGTT 9119
Query 77657 ATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGC 77716
|| | |||||||||||| | ||||| || || || || || ||||| || |||| |
Sbjct 9118 ATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTC 9059
Query 77717 GTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTG 77776
| ||||| | | ||| || || ||||| |||||||| |||||||| |||||||
Sbjct 9058 TGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTT 8999
Query 77777 TTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAAT 77836
||| || |||||| | || || | |||||||| | || | || || || || || |
Sbjct 8998 TTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCCAC 8939
Query 77837 CTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATCATAGATTTGTA--TC 77892
|| | ||| ||||| || ||||| | ||||| |||| | | | | ||| || ||
Sbjct 8938 TTGGGCTTCTATAATTGACTTCCATA--ACTCTTGAGCTCTGAC--TTGTTTTATAAATC 8883
Query 77893 GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACA-TCATCC 77951
| | ||| |||||||| | |||||| |||||||| ||||| || || ||| |
Sbjct 8882 GTTTTTCTTCTTCATATTTGGCATATAGTTCGTCAAATTCCTCTCCA-AAGCAGTCAGCG 8824
Query 77952 AATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTC 78011
| ||||| || |||| || ||||| | ||| | |||| | | |||| ||||
Sbjct 8823 AGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCTTTTC 8764
Query 78012 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTT 78071
||||| ||||| |||||||||| |||| ||| || |||| | ||| |||||| ||
Sbjct 8763 ATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTA 8704
Query 78072 CCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 78131
||||| ||||| || | ||| | || || | ||||| | |||||| || |||| |||
Sbjct 8703 CCTGTGTTCTTCTTTAAATCCAAGAATTCAAATATATCCGCATGCCAAGGCTCTAAATAA 8644
Query 78132 ATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTA 78191
||||| | | || || ||||| || || || ||||||| ||||||||| || || |||
Sbjct 8643 ATTGCAAATGCGCCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTA 8584
Query 78192 TAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTT 78251
|| |||||||||||||| | | ||| || || ||||| || |||| || |||
Sbjct 8583 TACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTGCCAGCTATGTAAGAA 8524
Query 78252 CCACTTGCGCGAAT--ATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTA 78309
|| || | || | | ||| || ||||| || || || ||||| ||||
Sbjct 8523 CCCTGAGCTCTGATGCAATGTGTATG--TAAACCTATGCCACCAGCAGATTTAGAAATTA 8466
Query 78310 GAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAA 78369
|| || |||| || ||||| ||||||| || || || || || |||| | ||
Sbjct 8465 ATGCACATTGTTTTAAAGTATCAAAGATACCTTCAATGCTATCGTCTTTCATAGCTATAA 8406
Query 78370 GAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCAT 78429
| |||||| || | || | | || |||| || | ||| || |||||
Sbjct 8405 GGAAACAGGAGGAAAGCTGTGGCCGCGGTGTGGCTGCGGAGAACAGTGTAGGGCTTGCAT 8346
Query 78430 GCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATT 78489
| ||||| |||| || || | | ||| || |||| || || || |||||
Sbjct 8345 GTGTAAAATATTTCTCTGACATCATATTATAAGTTTTGATTGCACTATCAATGTCTTCAC 8286
Query 78490 GATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACC 78539
|||||| |||| | || | ||| | ||| || ||||| |||||| ||
Sbjct 8285 CATGAATGCCTATGGAGACTCTCATAAGCATGTGTTGAGGCCTTTCAGCC 8236
Score = 114 bits (126), Expect = 2e-20
Identities = 92/111 (83%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 78542 CTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 78601
|||||| ||||| |||||||| |||||| ||||||||||||| |||||||||||||||||
Sbjct 7901 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAGTTGTA 7842
Query 78602 TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTT 78652
| ||| ||||| || |||| ||| |||| | || ||| || |||| |||
Sbjct 7841 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 7791
>seq32346
Length=5591
Score = 107 bits (118), Expect = 3e-18
Identities = 89/109 (82%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686
|| |||| ||||||||||| || |||||||| ||||| || |||||||||||||| | |
Sbjct 4158 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 4217
Query 48687 CATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTGGATTTT 48735
|||||||| |||||||||||||| |||||||| | | |||||||
Sbjct 4218 CATATATCTGGATATTGGATTGGGAATATAACAAAACGTCTAGGATTTT 4266
Score = 100 bits (110), Expect = 4e-16
Identities = 183/262 (70%), Gaps = 11/262 (4%)
Strand=Plus/Plus
Query 48123 AAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAAT 48182
||| | ||||| ||| || |||||| || | | |||| |||| ||| ||| | |
Sbjct 2943 AAAAGCTTAAA---TAAGAATACAAAATTACGAAACATACCT-CATCCCTAGAAATAAGT 2998
Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242
|| ||| || || | |||||||| || || |||||||| | ||||||||||| ||
Sbjct 2999 TCATTACTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGC- 3057
Query 48243 AAAGAT-CCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCC--- 48298
|||| | || || || ||||| || || || || ||||| || | | | |||||
Sbjct 3058 AAAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAA 3117
Query 48299 -GTAACTGGCTTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAG 48357
||| ||| ||| | || |||||| || ||||| || ||||||||||| ||||| |
Sbjct 3118 TGTAGCTGTCTT-GCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATG 3176
Query 48358 GCATTGTTTCTATAGCATTAAA 48379
| | ||||| || ||||| ||
Sbjct 3177 GTAGAGTTTCAATTGCATTGAA 3198
>seq38285
Length=4996
Score = 86.0 bits (94), Expect = 9e-12
Identities = 242/370 (65%), Gaps = 9/370 (2%)
Strand=Plus/Plus
Query 170967 TTATGATTCCTATAAATCCTATGTTAGCAGAATCATGTGATTCTGTTAACAAGGCATTTA 171026
|||||| ||| || || |||||||| ||| | || | || ||| | | ||| | |
Sbjct 1965 TTATGACTCCAGTATTACCGATGTTAGCTGAAGCTTGCAAATCAGTTGAAATGGCTATGA 2024
Query 171027 AAAAATTTCCATCTGGAATGTTTGCAGAAGTAAAATATGATGGTGAACGAGTCCAAGTTC 171086
|||||| |||| ||| ||||| | || ||||||||||||| ||||| || ||||| |
Sbjct 2025 AAAAATGTCCAAATGGCATGTTCTCTGAGATAAAATATGATGGAGAACGGGTTCAAGTCC 2084
Query 171087 ATAAAAACAATAATAATTTTGCCTTCTTTAGCAGAAACATGAAACCAGTTTTACCACATA 171146
||||||| ||| | || | ||| | | | | |||||||| | | || |
Sbjct 2085 ATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCAGTAATGGCTCACA 2144
Query 171147 AAGTTGATTATCTCAAGGAATACCTTCCTAAAGCATT---TAAAAAAGCTACCTCTATTA 171203
||||| | || | || || || | || |||||||| |||| || | || | |
Sbjct 2145 AAGTTAGTCATTTTAAAGATTATTTACCCAAAGCATTTCCTAAAGGAGATGACT---TGA 2201
Query 171204 TCTTGGATTCCGAAATTGTTCTAGTTGATGAACATAATG---TTCCACTTCCGTTTGGAA 171260
| |||||| | ||| | || | ||||||| ||| || ||| | || || || |
Sbjct 2202 TTTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTCGGTA 2261
Query 171261 GTCTAGGAATACACAAAAAGAAAGAGTACAAAAATGCTAATATGTGTTTGTTCGTCTTTG 171320
|||| || |||||| | ||| | ||| ||||| | | || || | | ||||
Sbjct 2262 CATTAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGCTTATATATATTTG 2321
Query 171321 ATTGTTTATA 171330
|||| |||||
Sbjct 2322 ATTGCTTATA 2331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 692605512096960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |