Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25] 237,614 sequences; 309,419,125 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq32346 141 1e-28 >seq32346 Length=5591 Score = 141 bits (156), Expect = 1e-28 Identities = 158/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 23777 TTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCT 23836 |||||||||| ||||||| |||| ||||| || ||||||| |||||| |||||||| | Sbjct 3810 TTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTT 3869 Query 23837 GAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTA 23896 |||| ||||| || || || ||||||| || |||||| || | |||| | | | | Sbjct 3870 GAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAAAAACGCTCCACCA 3929 Query 23897 AATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAAT 23956 | || || ||||||||||||||| ||| |||||||| || | |||| || ||||||| Sbjct 3930 AGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGCTTGATAAAAT 3989 Query 23957 GTCTTTCATCAGTTGATAATTTTTTCCAATC 23987 || | ||| | | |||| | | |||||| Sbjct 3990 GTTTCTCACAATCTTTTAATGTCTCCCAATC 4020 Score = 96.9 bits (106), Expect = 4e-15 Identities = 126/173 (73%), Gaps = 1/173 (1%) Strand=Plus/Plus Query 23503 AATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT 23562 ||||| || |||||| || | | ||| |||||||| ||| | ||||||| || Sbjct 2952 AATAAGAATACAAAATTACGAAACATACCT-CATCCCTAGAAATAAGTTCATTACTGAAA 3010 Query 23563 GTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA 23622 || ||||| ||||| | ||||||||||| | ||||||||||| |||||| || || Sbjct 3011 GTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCAAAGCTGCCTGAG 3070 Query 23623 AAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGC 23675 || || || |||||||| || ||||| || | | |||| |||||||| || Sbjct 3071 AAAAATATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAATGTAGC 3123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519939089379600