Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20heurippa_20[genbank_20GCA_5F900067975.1_202017-04-25]
237,614 sequences; 309,419,125 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq53127 141 2e-28
seq88586 138 3e-27
seq31223 127 5e-24
seq44559 123 6e-23
seq207359 122 2e-22
seq1324 98.7 2e-15
>seq53127
Length=7988
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| |||||| | || || ||||| ||||| | || |||||| || ||
Sbjct 5601 CAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCTGAT 5660
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||||||| ||||| ||||| |||||||| || || |||
Sbjct 5661 ACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATCCCTCCAGATCAACAA 5720
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || ||||||||||| || | |||||||| | || || | || ||||| ||
Sbjct 5721 AGACTAATTTTCGCCGGAAAGCAATTGGAAGATGGGCGCACACTGTCAGACTATAATATC 5780
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|| || ||||| || |||| | |||||| | || ||
Sbjct 5781 CAGAAGGAATCTACTTTGCACTTAGTTTTGCGTCTAAG 5818
Score = 138 bits (152), Expect = 3e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| |||||||| | || || ||||| ||||| | || |||||| || ||
Sbjct 6969 CAAATTTTTGTGAAAACATTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCTGAT 7028
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || ||||||||| ||||| ||||| || ||||| ||||| |||
Sbjct 7029 ACAATAGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCAACAA 7088
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || ||||||||||| || || ||||||||| | || | | || ||||| ||
Sbjct 7089 AGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACATTGTCAGACTATAATATC 7148
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || || || || ||||| | |||||| | || |||
Sbjct 7149 CAGAAGGAGTCTACTTTGCATTTAGTTTTGCGTCTAAGA 7187
Score = 138 bits (152), Expect = 3e-27
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| || || || || || || ||||| ||||| | ||||||||| || ||
Sbjct 7425 CAAATTTTTGTAAAGACGCTGACTGGGAAAACTATCACTTTGGAGGTGGAAGCTTCTGAT 7484
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || ||||||||| || || ||||| || ||||| || || |||
Sbjct 7485 ACAATAGAAAATGTTAAGGCAAAGATTCAAGATAAGGAAGGCATTCCTCCAGATCAACAA 7544
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||| || ||||||||||| || || |||||||| | || | | || ||||| ||
Sbjct 7545 AGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACATTGTCAGACTATAATATC 7604
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| |||||||| || || || |||||| | ||||| |||
Sbjct 7605 CAGAAAGAATCTACCCTTCACCTTGTTCTCAGACTTAGA 7643
Score = 129 bits (142), Expect = 1e-24
Identities = 152/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || || || || ||||| | || || || || ||
Sbjct 5829 CAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTCTGAT 5888
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| ||| |||||||| ||||| ||||| || || || ||||||
Sbjct 5889 ACAATTGAAAATGTTAAAGCAAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCAGCAA 5948
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||||| || || ||||| ||||| ||||||||| | || || | ||||| ||| |
Sbjct 5949 AGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGATTACAACATT 6008
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| |||||||| || |||| || ||
Sbjct 6009 CAGAAAGAATCTACTTTGCACCTAGT 6034
Score = 127 bits (140), Expect = 5e-24
Identities = 152/205 (74%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || || || || ||||| ||||| | || |||||| || ||
Sbjct 6057 CAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAAGCTTCTGAT 6116
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || ||| ||||| ||||||||||| || ||||| ||||| ||
Sbjct 6117 ACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCAACAG 6176
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| ||||| || || ||||||||||| ||||||||| | || || | |||||||| |
Sbjct 6177 AGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATAATATT 6236
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| ||||| || |||| ||||
Sbjct 6237 CAAAAGGAATCTACTTTGCA-CTTG 6260
>seq88586
Length=4530
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| || || || || || ||||| || |||||||||||||| ||| ||
Sbjct 2402 CAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTCTGAT 2343
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| || || || || || ||||| || || || |||||||||
Sbjct 2342 ACTATAGAAAATGTTAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCAGCAA 2283
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || ||||| || ||||||||| | || | | || || ||| |
Sbjct 2282 CGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAACATT 2223
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||| ||||| ||| ||||||||||
Sbjct 2222 CAAAAGGAATCCACATTGCATCTTGT 2197
>seq31223
Length=3647
Score = 127 bits (140), Expect = 5e-24
Identities = 148/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||| || ||||| ||||| |||||||| || || | || || ||| || |||
Sbjct 270 CAAATTTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCTGAC 211
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| || || || ||||||||||| || ||||| || || |||
Sbjct 210 ACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAACAA 151
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||| || || || || || | |||||||| | || || | || |||||| ||
Sbjct 150 CGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTATAACATC 91
Query 178104 CAAAAAGAATCAACACTGCA 178123
||||||||||| || ||||
Sbjct 90 CAAAAAGAATCTACTTTGCA 71
Score = 118 bits (130), Expect = 3e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| ||||||||||| ||||| | ||||| || || |||
Sbjct 498 CAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTCCGAC 439
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || |||||| || |||||||| || || || || || || ||
Sbjct 438 ACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAACAG 379
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| ||||| || || |||||||| || |||||||| | || | | |||||||| |
Sbjct 378 AGGCTTATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAATATT 319
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
||||| ||||| || || ||| | || |||
Sbjct 318 CAAAAGGAATCGACCCTACATTTAGTATTG 289
Score = 111 bits (122), Expect = 4e-19
Identities = 154/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || || |||||||| || || || ||||| || || | || || |||
Sbjct 732 AAAATGC---AGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAA 676
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| || || || || || || ||| || ||||| ||||| ||||| || |||||
Sbjct 675 CCTTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCA 616
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| || ||||| | || ||||| ||||| || | ||||| ||| | |||||| | ||
Sbjct 615 GATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGAC 556
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128
||||| | ||||||||||| || || || ||||
Sbjct 555 TATAATATTCAAAAAGAATCTACTCTTCA-CTTG 523
>seq44559
Length=2984
Score = 123 bits (136), Expect = 6e-23
Identities = 151/205 (74%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || ||||| || || |||||||| || || | || || || ||||||
Sbjct 667 CAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCTTCAGAC 726
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || || ||| |||||||| || || |||||||| ||||| || || |||
Sbjct 727 ACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAACAA 786
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| || || || || |||||||| | || || | || || || ||
Sbjct 787 CGTCTTATCTTCGCTGGTAAGCAACTGGAAGATGGCCGCACCCTGTCTGACTACAATATC 846
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| ||||| || || || || ||||
Sbjct 847 CAGAAAGAGTCCACCCTTCA-CTTG 870
Score = 114 bits (126), Expect = 3e-20
Identities = 146/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| || || || || ||||| | |||||||| || |||
Sbjct 1123 CAGATCTTTGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTGGAGCCATCCGAC 1182
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || ||||| || ||||| || || || || || ||||| ||
Sbjct 1183 ACTATCGAAAATGTTAAGGCTAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAACAG 1242
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || |||||| | || ||||| | ||||| | || |||||| ||
Sbjct 1243 CGTCTCATCTTTGCTGGTAAACAGTTAGAGGATGGCCGCACTCTATCGGACTATAACATC 1302
Query 178104 CAAAAAGAATCAACACTGCAT 178124
||||||||||| || |||||
Sbjct 1303 CAAAAAGAATCTACTTTGCAT 1323
>seq207359
Length=487
Score = 122 bits (134), Expect = 2e-22
Identities = 147/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || ||||| ||||| |||||||| || || | || || ||| || |||
Sbjct 218 CAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCTGAC 277
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| || || || ||||||||||| || |||||||| || |||
Sbjct 278 ACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAACAA 337
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||| || || || || || | |||||||| | || || | || || ||| ||
Sbjct 338 CGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACAACATC 397
Query 178104 CAAAAAGAATCAACACTGCA 178123
||||||||||| || ||||
Sbjct 398 CAAAAAGAATCTACTTTGCA 417
Score = 118 bits (130), Expect = 3e-21
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 177936 AAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAAC 177995
|| ||||| ||||||||||| || || || ||||| ||| || ||||| ||||| ||
Sbjct 2 AAGACTCTTACAGGAAAAACCATTACTCTTGAGGTAGAACCGTCCGACACTATCGAAAAT 61
Query 177996 GTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTC 178055
|| || |||||| || |||||||| || || || || || || || | || || |||
Sbjct 62 GTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAACAGAGGCTGATTTTC 121
Query 178056 GCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCA 178115
|| |||||||| || |||||||| | || | | |||||||| | ||||| |||||
Sbjct 122 GCTGGAAAACAACTGGAAGATGGCCGTACATTATCTGATTATAATATTCAAAAGGAATCT 181
Query 178116 ACACTGCATCTTGTTTTG 178133
|| || ||| | || |||
Sbjct 182 ACCCTACATTTAGTATTG 199
>seq1324
Length=7229
Score = 98.7 bits (108), Expect = 2e-15
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||||||||| || || || || || |||||||| ||||| || ||| |||
Sbjct 1660 CAGATTTTCGTGAAAACCCTAACGGGTAAGACCATCACCCTTGAGGTCGAGCCCTCGGAC 1601
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042
|| |||||||| || || ||||| || |||||||| ||||| || || ||||||||
Sbjct 1600 ACTATCGAGAATGTAAAGGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGACCAGCA 1542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1200066525375116
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