Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 223 3e-53
seq218964 91.5 1e-13
seq117972 89.7 4e-13
seq131538 86.0 5e-12
seq153336 84.2 2e-11
>seq21365
Length=2821
Score = 223 bits (246), Expect = 3e-53
Identities = 443/644 (69%), Gaps = 23/644 (4%)
Strand=Plus/Plus
Query 105997 gggTTAGCCCCTTTGCCGCCCGGAAACTCCCAATCGATGTCTACACCGTCAAAGAATTTC 106056
|||||||| ||||| || || ||||||||||||||||| |||||||| || |||||||||
Sbjct 831 GGGTTAGCACCTTTACCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTC 890
Query 106057 CACACTTGCAGAAATTCCTTAACCGAATCTACAAAAACGT-TTCTTTTTTCAACATCGTG 106115
|| | | ||||| ||||| || || | ||||| ||| ||||||| | | ||
Sbjct 891 CATGTTAGGAGAAACTCCTTTACTGACTGCACAAAT-CGTGTTCTTTT---AGATTTGTC 946
Query 106116 CAT--AAAATAA-AATGGGTCTGATAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTTAA 106172
| |||| || || || || | || ||||| || || || || |||||||| || ||
Sbjct 947 AACTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAA 1006
Query 106173 ATGGGGGTTTGCTAATTTTGCCGCCATCAACTGTCCAAAATTGCCTTTATACGGCTCGTT 106232
| ||| ||| |||| | ||| || || ||||| |||||||| || ||||||||
Sbjct 1007 TTCAGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTT 1066
Query 106233 CCAAGCGGACACACCTTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGAATGGCAAC 106292
||| | |||| |||||||| |||||||||| || ||||| |||||||| || | ||
Sbjct 1067 CCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGAC 1126
Query 106293 TTTGAAATCTTCGCGTCCCTTGCACGATCTTTGCAAAGATTCAAAGCTTCCGGGTATCGT 106352
|||||| || || || || | || || | ||||| | || || || || |||
Sbjct 1127 TTTGAAGTCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTC 1186
Query 106353 TTTGAGGGCGTCGTTTATTCCATCGCCGCCGCAGATGGGTATGAAACCATACAACAAGTG 106412
||| | | || ||||| || || |||||||| ||||| || || ||||| | ||| ||
Sbjct 1187 TTTTAAGCTATCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATG 1246
Query 106413 TGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGTTGCGCCCGTACACACCCCACTC 106472
| | ||| || | || | || ||||| || || | ||| |||||||| ||
Sbjct 1247 AGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGGTAGACACCCCATTC 1306
Query 106473 AACAAAGTACGCAGCGACAATTTTATCC---TCTCT-CCTGCCAGGTTTGTTGTTTTCCA 106528
|| ||||| || | |||| ||| ||| | | | | || ||||| || |||||
Sbjct 1307 TACGAAGTAGGCGCCCACAACTTT-TCCAGATGTTTGCTTGAATGGTTTATTTTTTTCTC 1365
Query 106529 GCCATGTGTATTCGAGCGGTGCCAGATGGCCGCCGTCGGTGTCTGCGACTTTGACCAACA 106588
| |||| ||||| | || | ||| | || || || || || || ||| |
Sbjct 1366 CCAATGTATATTCCAAAGGAAGTAAATGACTTCCATCAGTATCGGCCAC---GACAATTT 1422
Query 106589 C---GGGATCGCT--CACGGAACAGCCGTCCTCATTGCAAAGTT 106627
| ||||||||| || | |||||||| |||||||||||||
Sbjct 1423 CGGTGGGATCGCTTGAACTG--CAGCCGTCTTCATTGCAAAGTT 1464
>seq218964
Length=932
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018
|||||||| || ||| | |||||| | ||||| ||||||||||| ||| |||||
Sbjct 637 AAAATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCT 696
Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078
| || || | | || | || |||||| || || ||||| | || ||||
Sbjct 697 TCCGACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 756
Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138
|||||| | | || || || || || ||| ||||||| | ||| | | || |||
Sbjct 757 CAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGACTAC 816
Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|| ||||| || ||||||||||||||| |||| || || |||| || ||
Sbjct 817 AACATTCAAAAAGAATCTACTCTTCACCTGGTATTGCGTCTACGTGGTGG 866
>seq117972
Length=685
Score = 89.7 bits (98), Expect = 4e-13
Identities = 88/112 (79%), Gaps = 4/112 (4%)
Strand=Plus/Minus
Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114
|| ||||||||| | ||| ||| ||||| || || || ||||| || ||||||||||||
Sbjct 635 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 576
Query 29115 GATTCCA--AAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 29164
||| | | ||||| | ||||| |||||||| |||||||||||||| ||
Sbjct 575 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACA 526
>seq131538
Length=717
Score = 86.0 bits (94), Expect = 5e-12
Identities = 100/133 (75%), Gaps = 4/133 (3%)
Strand=Plus/Plus
Query 29035 ATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 29094
|| ||||| ||||||| || |||||||| | || ||| ||||| || | || |
Sbjct 4 ATGTTAAGGCAAAAATTCAGGACAAAGAAGGCATTCCTCCAGACCAACAGAGGTTGATTT 63
Query 29095 TTGCGGGCAAACAACTGGAAGATT--CCAAAACTATGGCCGATTACAATATTCAGAAGGA 29152
|||| || || ||||| |||||| | || | ||| | ||||||||||||||||| ||
Sbjct 64 TTGCCGGTAAGCAACTTGAAGATGGACGAACATTAT--CTGATTACAATATTCAGAAAGA 121
Query 29153 ATCTACTCTTCAC 29165
|||||||||||||
Sbjct 122 ATCTACTCTTCAC 134
>seq153336
Length=250
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020
||||||||| || | |||||| | || || ||||| ||||| ||| |||| | |
Sbjct 233 AATGCAAATTTTTGTAAAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTC 174
Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080
|| || | | || ||||| ||| ||| || || ||||| | || ||| ||
Sbjct 173 TGATACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCA 114
Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140
||||||| | || || || || || |||||||||||| || || | || || ||
Sbjct 113 ACAAAGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCGGACTATAA 54
Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176
|| ||||||||||||||| | ||| | ||||| ||
Sbjct 53 CATCCAGAAGGAATCTACTTTGCACTTAGTGTTGCG 18
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426651008362970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |