Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq21365 223 3e-53 seq218964 91.5 1e-13 seq117972 89.7 4e-13 seq131538 86.0 5e-12 seq153336 84.2 2e-11 >seq21365 Length=2821 Score = 223 bits (246), Expect = 3e-53 Identities = 443/644 (69%), Gaps = 23/644 (4%) Strand=Plus/Plus Query 105997 gggTTAGCCCCTTTGCCGCCCGGAAACTCCCAATCGATGTCTACACCGTCAAAGAATTTC 106056 |||||||| ||||| || || ||||||||||||||||| |||||||| || ||||||||| Sbjct 831 GGGTTAGCACCTTTACCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTC 890 Query 106057 CACACTTGCAGAAATTCCTTAACCGAATCTACAAAAACGT-TTCTTTTTTCAACATCGTG 106115 || | | ||||| ||||| || || | ||||| ||| ||||||| | | || Sbjct 891 CATGTTAGGAGAAACTCCTTTACTGACTGCACAAAT-CGTGTTCTTTT---AGATTTGTC 946 Query 106116 CAT--AAAATAA-AATGGGTCTGATAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTTAA 106172 | |||| || || || || | || ||||| || || || || |||||||| || || Sbjct 947 AACTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAA 1006 Query 106173 ATGGGGGTTTGCTAATTTTGCCGCCATCAACTGTCCAAAATTGCCTTTATACGGCTCGTT 106232 | ||| ||| |||| | ||| || || ||||| |||||||| || |||||||| Sbjct 1007 TTCAGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTT 1066 Query 106233 CCAAGCGGACACACCTTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGAATGGCAAC 106292 ||| | |||| |||||||| |||||||||| || ||||| |||||||| || | || Sbjct 1067 CCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGAC 1126 Query 106293 TTTGAAATCTTCGCGTCCCTTGCACGATCTTTGCAAAGATTCAAAGCTTCCGGGTATCGT 106352 |||||| || || || || | || || | ||||| | || || || || ||| Sbjct 1127 TTTGAAGTCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTC 1186 Query 106353 TTTGAGGGCGTCGTTTATTCCATCGCCGCCGCAGATGGGTATGAAACCATACAACAAGTG 106412 ||| | | || ||||| || || |||||||| ||||| || || ||||| | ||| || Sbjct 1187 TTTTAAGCTATCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATG 1246 Query 106413 TGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGTTGCGCCCGTACACACCCCACTC 106472 | | ||| || | || | || ||||| || || | ||| |||||||| || Sbjct 1247 AGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGGTAGACACCCCATTC 1306 Query 106473 AACAAAGTACGCAGCGACAATTTTATCC---TCTCT-CCTGCCAGGTTTGTTGTTTTCCA 106528 || ||||| || | |||| ||| ||| | | | | || ||||| || ||||| Sbjct 1307 TACGAAGTAGGCGCCCACAACTTT-TCCAGATGTTTGCTTGAATGGTTTATTTTTTTCTC 1365 Query 106529 GCCATGTGTATTCGAGCGGTGCCAGATGGCCGCCGTCGGTGTCTGCGACTTTGACCAACA 106588 | |||| ||||| | || | ||| | || || || || || || ||| | Sbjct 1366 CCAATGTATATTCCAAAGGAAGTAAATGACTTCCATCAGTATCGGCCAC---GACAATTT 1422 Query 106589 C---GGGATCGCT--CACGGAACAGCCGTCCTCATTGCAAAGTT 106627 | ||||||||| || | |||||||| ||||||||||||| Sbjct 1423 CGGTGGGATCGCTTGAACTG--CAGCCGTCTTCATTGCAAAGTT 1464 >seq218964 Length=932 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 |||||||| || ||| | |||||| | ||||| ||||||||||| ||| ||||| Sbjct 637 AAAATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCT 696 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | || | || |||||| || || ||||| | || |||| Sbjct 697 TCCGACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 756 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 |||||| | | || || || || || ||| ||||||| | ||| | | || ||| Sbjct 757 CAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGACTAC 816 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || ||||| || ||||||||||||||| |||| || || |||| || || Sbjct 817 AACATTCAAAAAGAATCTACTCTTCACCTGGTATTGCGTCTACGTGGTGG 866 >seq117972 Length=685 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/112 (79%), Gaps = 4/112 (4%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || ||||||||| | ||| ||| ||||| || || || ||||| || |||||||||||| Sbjct 635 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 576 Query 29115 GATTCCA--AAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 29164 ||| | | ||||| | ||||| |||||||| |||||||||||||| || Sbjct 575 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACA 526 >seq131538 Length=717 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/133 (75%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 29035 ATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 29094 || ||||| ||||||| || |||||||| | || ||| ||||| || | || | Sbjct 4 ATGTTAAGGCAAAAATTCAGGACAAAGAAGGCATTCCTCCAGACCAACAGAGGTTGATTT 63 Query 29095 TTGCGGGCAAACAACTGGAAGATT--CCAAAACTATGGCCGATTACAATATTCAGAAGGA 29152 |||| || || ||||| |||||| | || | ||| | ||||||||||||||||| || Sbjct 64 TTGCCGGTAAGCAACTTGAAGATGGACGAACATTAT--CTGATTACAATATTCAGAAAGA 121 Query 29153 ATCTACTCTTCAC 29165 ||||||||||||| Sbjct 122 ATCTACTCTTCAC 134 >seq153336 Length=250 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| || | |||||| | || || ||||| ||||| ||| |||| | | Sbjct 233 AATGCAAATTTTTGTAAAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTC 174 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | || ||||| ||| ||| || || ||||| | || ||| || Sbjct 173 TGATACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCA 114 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 ||||||| | || || || || || |||||||||||| || || | || || || Sbjct 113 ACAAAGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCGGACTATAA 54 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 || ||||||||||||||| | ||| | ||||| || Sbjct 53 CATCCAGAAGGAATCTACTTTGCACTTAGTGTTGCG 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426651008362970