Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq21365 215 4e-51 seq218964 100 2e-16 seq117972 93.3 3e-14 >seq21365 Length=2821 Score = 215 bits (238), Expect = 4e-51 Identities = 438/642 (68%), Gaps = 19/642 (3%) Strand=Plus/Plus Query 97764 GGGTTAGCCCCTTTGCCGCCCGGAAATTCCCAATCGACGTCGACACCATCAAAAAATTTC 97823 |||||||| ||||| || || ||||| |||||||||| || |||||||| || |||||| Sbjct 831 GGGTTAGCACCTTTACCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTC 890 Query 97824 CACACTTGCAAAAATTCCTTAACCGACTCTACAAAAACGT-TTCTTTTTTCAACGTCGTG 97882 || | | | ||| ||||| || |||| ||||| ||| ||||||| ||| Sbjct 891 CATGTTAGGAGAAACTCCTTTACTGACTGCACAAAT-CGTGTTCTTTTAGATTTGTCAAC 949 Query 97883 CATGAAATAGAACGGGTCCGACAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTTAGATG 97942 | || |||| || || | || ||||| || || || || |||||||| || | | Sbjct 950 TAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAATTC 1009 Query 97943 TGGGTTTGCTAATTTCGCCGCCATCAATTGTCCAAAATTGCCTTTGTACGGTTCGTTCCA 98002 ||| ||| ||| | ||| ||||| ||||| ||||||||||| || |||||||| Sbjct 1010 AGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCA 1069 Query 98003 AGCGGACACGCCCTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGGATGGCAACTTT 98062 | |||| || ||||| |||||||||| || ||||| ||||||||||| | ||||| Sbjct 1070 TGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTT 1129 Query 98063 GAAATCTTCGCGTCCCCTGCACGATCGTTGCAGAGCTTCAAAACTTCCGGGTATTGTTTT 98122 ||| || || || || || || || |||||||| |||| ||||| || || ||| Sbjct 1130 GAAGTCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTT 1189 Query 98123 GAGGGCGTCGTTTATTCCATCGCCACCGCAGATGGGTATGAAACCGTACAACAAGTGCGA 98182 | | || ||||| || || || ||||| ||||| || || || || | ||| || | Sbjct 1190 TAAGCTATCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGT 1249 Query 98183 TAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGCTGCGCCCGTACACACCCCACTCGAC 98242 | ||| || | || | || ||||| || | | ||| |||||||| || || Sbjct 1250 AAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGGTAGACACCCCATTCTAC 1309 Query 98243 AAAGTACGCAGCGACAATTTTATCC---TCTCTTC-TGCCGGGTTTGTTGTTTTCCAGCC 98298 ||||| || | |||| ||| ||| | | | | || ||||| || ||||| | Sbjct 1310 GAAGTAGGCGCCCACAACTTT-TCCAGATGTTTGCTTGAATGGTTTATTTTTTTCTCCCA 1368 Query 98299 ATGTGTATTCGAGCGGCGCCAGATGACCGCCGTCGGTGTCTGCGATTTTGACCAACAC-- 98356 |||| ||||| | || | ||||| || || || || || | ||| | | Sbjct 1369 ATGTATATTCCAAAGGAAGTAAATGACTTCCATCAGTATCGGCCA---CGACAATTTCGG 1425 Query 98357 -GGGATCGCTTATGGAA---CAGCCGTCCTCATTGCAAAGTT 98394 |||||||||| ||| |||||||| ||||||||||||| Sbjct 1426 TGGGATCGCTT---GAACTGCAGCCGTCTTCATTGCAAAGTT 1464 >seq218964 Length=932 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 |||||||| || ||| | |||||| | ||||| ||||||||||| ||| ||||| Sbjct 637 AAAATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCT 696 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || || | | || | || |||||| || || ||||| | || |||| Sbjct 697 TCCGACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 756 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 |||||| | | || || || || || ||||||||||| | ||| | | || ||| Sbjct 757 CAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGACTAC 816 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || |||||||| ||||||||||||||| |||| || || |||| || || Sbjct 817 AACATTCAAAAAGAATCTACTCTTCACCTGGTATTGCGTCTACGTGGTGG 866 >seq117972 Length=685 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | |||||| | || |||||||| ||||| ||| ||| || | Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| ||||| || |||||||| | || ||||||| Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212 ||| | ||||| || |||||||| |||||||||||| || | ||| | | || |||| Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTT--CTGACTACA 323 Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 | || ||||| ||||||||| | || | || | || ||| |||| || Sbjct 322 ACATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGG 274 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/112 (79%), Gaps = 4/112 (4%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || ||||||||| | ||| ||| ||||| || || || ||||| || |||||| ||||| Sbjct 635 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 576 Query 25188 GATTCCA--AAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCA 25237 ||| | | ||||| | ||||| ||||||||||||||||||||||| || Sbjct 575 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACA 526 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 |||||| || || | ||||| | || || || |||||||| ||| ||||||| | Sbjct 273 AATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTC 214 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | || ||||| || ||||| || | || ||||| Sbjct 213 TGATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCA 154 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 || | ||||||||||| || || |||||||||||| ||| | |||||||||| Sbjct 153 GCAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAA 94 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 |||||||| |||||||||||||| |||| || || Sbjct 93 CATTCAAAAAGAATCTACTCTTCATTTGGTATTGCG 58 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409180804210436