Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 129 6e-25
seq153336 114 1e-20
seq213871 109 6e-19
seq117972 104 2e-17
seq218964 100 3e-16
>seq21365
Length=2821
Score = 129 bits (142), Expect = 6e-25
Identities = 253/374 (68%), Gaps = 0/374 (0%)
Strand=Plus/Plus
Query 65660 AACGGATCGGACAGGGTCCAGCCGCCGATGGAGGGCAGCACGCGCAGGTGCGGGTGCGCC 65719
|| ||||||| || ||||| || || || ||||| || | || | ||| | ||
Sbjct 960 AAAGGATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAATTCAGGGCGGGCT 1019
Query 65720 TTCTTGATGGCCATCAGCTGGCCGAAGTTGCCCTTGTACGGCTCGCTCCACGCGGTCACG 65779
| || | | ||| | ||||| |||||||| ||||| |||||| |||| | | ||
Sbjct 1020 TGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAAT 1079
Query 65780 CCCTTTTGCGGCTTCTGCACGGCCGCCCACGGGTCGTGCACCGCCAGCTTGAAGTCGTCG 65839
|| ||||| || || || | || ||||| || ||||| | | | |||||||| ||
Sbjct 1080 CCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCA 1139
Query 65840 CGGCCCGCGCACGAGCGCTGCAGCGCCTCGAAGCTGCCCGCGATGGACTTGAGGCTGTCG 65899
||||| || || || ||||| || | ||| ||||| |||| || | ||| ||
Sbjct 1140 CGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTATCA 1199
Query 65900 TTGATGCCGTCCCCGCCGCACATCGGCACGAAGCCGTACAGCAGATGCGTGAGGTTGGGC 65959
|| |||||||| |||||||| || || | ||||| || |||| ||| || || || ||
Sbjct 1200 TTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGT 1259
Query 65960 ACGGGCACCTTGTCGGCGGGAAAGTCGCGCCCGTACACGCCCCACTCGACGAAGTAGGCG 66019
| || | || |||| || | | ||| || ||||| || ||||||||||||
Sbjct 1260 ATAGGTATACGATCCACGGGGAATTTCCTAGGGTAGACACCCCATTCTACGAAGTAGGCG 1319
Query 66020 GCCACCACCTTGCC 66033
|||| || || ||
Sbjct 1320 CCCACAACTTTTCC 1333
>seq153336
Length=250
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
||||||||| || |||||||| || || || ||||| || || | || || ||||| |
Sbjct 233 AATGCAAATTTTTGTAAAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTC 174
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | ||| | |||| ||| |||| ||||| || ||||| || | |||||
Sbjct 173 TGATACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCA 114
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || | || | ||| || || || ||||| || | |||||| || ||||| ||
Sbjct 113 ACAAAGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCGGACTATAA 54
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||||| | || |||| |||||||||| | ||||| ||
Sbjct 53 CATCCAGAAGGAATCTACTTTGCACTTAGTGTTGCGTCTAAGGGGTGG 6
>seq213871
Length=423
Score = 109 bits (120), Expect = 6e-19
Identities = 160/224 (71%), Gaps = 2/224 (1%)
Strand=Plus/Plus
Query 116945 TTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGC 117004
||||| || || || ||||| | || || | || ||||||| || |||||| | |
Sbjct 132 TTGTTCAATGCAATTGAGACTCTACCATGTATTAAGAAGAAGGCAGACTGGGCGTTACAG 191
Query 117005 TGGATCGCCGGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGA 117063
||||||| | ||| ||| ||| | || || || || | | || || ||||| || ||
Sbjct 192 TGGATCGGCAGCA-AGACTGCCACATTTGGAGAACGTATTATCGCTTTTGCGGCGGTTGA 250
Query 117064 GGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCAT 117123
||| | || || || ||||| || || | ||||||||| | || ||||| ||| | ||
Sbjct 251 GGGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTTTGGTTGAAAAAACGAGGCTTGAT 310
Query 117124 GCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167
|||||| | ||||||||||| || || || || ||||| ||||
Sbjct 311 GCCCGGATTAACTTTCAGCAATGAACTTATTTCTAGGGATGAGG 354
>seq117972
Length=685
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || ||||| || || |||||||| || || | || || |||||| |
Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | ||| | |||| ||||| | |||||||| ||||| || | || ||
Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| || || | ||||||||| || |||| || | || || || |||||||||
Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAAC 321
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
||||| || || | || ||||| |||| | || || || || ||
Sbjct 320 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGG 274
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748
|||||| || || || ||||| || || || || ||||| || | || || ||| || |
Sbjct 273 AATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTC 214
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | ||| | || | ||||| | ||||||||||||||||| | || ||
Sbjct 213 TGATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCA 154
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| || || || || |||| || | ||||| || ||| |||||
Sbjct 153 GCAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAA 94
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||| || || || | || || ||| | || |||||
Sbjct 93 CATTCAAAAAGAATCTACTCTTCATTTGGTATTGCG 58
>seq218964
Length=932
Score = 100 bits (110), Expect = 3e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|||||||| || ||||| ||||| |||||||| |||||||| || | || || ||| |
Sbjct 637 AAAATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCT 696
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| | ||| | || | ||||||| ||||| || ||||| || | ||
Sbjct 697 TCCGACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 756
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
|| ||||| | || | ||| || || || |||| |||| ||||| || ||||||
Sbjct 757 CAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGACTAC 816
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||| || || || | || || || || || |||||
Sbjct 817 AACATTCAAAAAGAATCTACTCTTCACCTGGTATTGCG 854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 513140457974240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |