Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 178 1e-39
seq117972 118 9e-22
seq218964 113 4e-20
seq153336 100 2e-16
seq2512 82.4 7e-11
>seq21365
Length=2821
Score = 178 bits (196), Expect = 1e-39
Identities = 349/510 (68%), Gaps = 12/510 (2%)
Strand=Plus/Minus
Query 21569 AAAATCGTGGCGGCCTACTTTGTCGAATGGGGAGTGTACCTGAGACAGTTCCCCGTCGAC 21628
||| | |||| |||||||| || |||||||| || |||| || | |||||||| ||
Sbjct 1330 AAAGTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGAT 1271
Query 21629 AAGGTGCCGGCGCCGAATCTATCACATATACTATACGGCTTCGTGCCGATATGCGGAGGC 21688
| || || ||||| | ||| | || || ||||| | || || ||||| ||
Sbjct 1270 CGTATACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGT 1211
Query 21689 GACGGCATCAACGACGCGCTAAAAACGGTGCCTGGCAGTTTTGAGGCATTGCAACGTTCG 21748
|||||||| || || ||||| | | |||||||| | ||| ||||||| ||
Sbjct 1210 GACGGCATAAATGATAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCC 1151
Query 21749 TGTGCGGGTCGGGCCGATTTCAAGGTGGCTATACACGATCCGTGGGCCGCAATACAAAAG 21808
||| || || | || ||||| || | || |||||||| ||||| ||| |||||||
Sbjct 1150 TGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 1091
Query 21809 CCCCAAAAGGGCGTCTCGTCATGGAACGAACCGTACAAAGGCAACTTTGGTCAACTGATG 21868
|| ||||| || | || ||||||||||| || ||||||||||||||||| ||| | |||
Sbjct 1090 CCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATG 1031
Query 21869 GCAATGAAGAGGGCCAATCCTCACATTAAAG--TGTTCGCATCGATCGGCGGATGGACTC 21926
|| | || ||| ||| | ||| ||| | ||| | ||||| || || ||||| |
Sbjct 1030 TCACTAAAACAAGCCCGCCCTGA-ATTGAAGATTCTTC-CCTCGATTGGTGGGTGGACGC 973
Query 21927 TGTCCGATCCATT----TTATCATATGCACGACGCCGACGTCAGACGGGTGTTTATCGAT 21982
| ||||||| || || | | || || | | | | ||| ||| | |
Sbjct 972 TTGCCGATCCTTTCTTCTTTTTAGTTG-ACAAATCTAAAAGAACACG---ATTTGTGCAG 917
Query 21983 TCAGTTGAAGAATTTCTGCTCACGTGGAAGTTCTATGACGGCGTCCACATCGATTGGGAG 22042
||||| | || ||||| || || ||||| |||| || || || | ||||||||||||
Sbjct 916 TCAGTAAAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAG 857
Query 22043 TTTCCCGGCGGCAAGGGAGCCAACCCCGAC 22072
||||| || || || || || ||||| |||
Sbjct 856 TTTCCTGGTGGTAAAGGTGCTAACCCTGAC 827
>seq117972
Length=685
Score = 118 bits (130), Expect = 9e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
||| ||||| || | ||||| ||||||||||||||||||||| | |||||| |||
Sbjct 60 CAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTGCGACCATC 119
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| | || || ||||| |||| || ||||||||||| || || |||||||| |||||
Sbjct 120 TTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTCTTTGTC 179
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| ||||| ||| || | ||| | || || | | || || || | || | ||
Sbjct 180 TTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGT 239
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || ||||| ||||||||||||||
Sbjct 240 CTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272
>seq218964
Length=932
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
|| || |||| | ||| |||| ||| | ||||| ||||||||||||||||| ||
Sbjct 866 CCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAA 807
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| |||||| || || | || ||||||||| | || | ||| || ||||| |||||
Sbjct 806 AGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 747
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
||||| ||||||||| |||||| ||| || | ||| | ||||| | || ||
Sbjct 746 ATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACT 687
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | ||||| || || || ||||| || |||||||||||
Sbjct 686 TCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 640
>seq153336
Length=250
Score = 100 bits (110), Expect = 2e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|||||| ||||| | ||||| || || || ||||| || || || |||||| |||
Sbjct 20 CAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGACAGTGTGCGCCCATC 79
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| || || ||||| ||| | || | | || || || ||||| ||||| ||||||||
Sbjct 80 TTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATGCCTTCCTTGTC 139
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGT-GCTCTCGACCTCGACGGTCACCG 118704
| ||| ||| ||||| | ||||| || || | ||| || || || | || | |
Sbjct 140 TTGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCT-TCCACTTCTAAAGTAATAG 198
Query 118705 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| || || || |||||||||||||| |||||
Sbjct 199 TTTTTCCAGTTAGTGTTTTTACAAAAATTTGCAT 232
>seq2512
Length=3386
Score = 82.4 bits (90), Expect = 7e-11
Identities = 90/120 (75%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 105990 GGCTTCTATTACATCGGTCGCGGAGATGAGGTACGTTGTGCCTTTTGCAAGGTCGAGATT 106049
|||||||||||| | || ||||| ||||| ||||| || || ||||| || || || |||
Sbjct 1496 GGCTTCTATTACCTGGGCCGCGGTGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAATT 1437
Query 106050 ATGAATTGGAGAGAGGGCGACGATCCGATTGTCGATCACAATAGATGGGCGCCGCAATGC 106109
||||| ||| | |||||||||||| | || ||| | | |||||||| || |||
Sbjct 1436 ATGAAATGGGTCGCGGGCGACGATCCCGCTAAGGACCACCAACGGTGGGCGCCCCAGTGC 1377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 432123794447608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |