Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq21365 178 1e-39 seq117972 118 9e-22 seq218964 113 4e-20 seq153336 100 2e-16 seq2512 82.4 7e-11 >seq21365 Length=2821 Score = 178 bits (196), Expect = 1e-39 Identities = 349/510 (68%), Gaps = 12/510 (2%) Strand=Plus/Minus Query 21569 AAAATCGTGGCGGCCTACTTTGTCGAATGGGGAGTGTACCTGAGACAGTTCCCCGTCGAC 21628 ||| | |||| |||||||| || |||||||| || |||| || | |||||||| || Sbjct 1330 AAAGTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGAT 1271 Query 21629 AAGGTGCCGGCGCCGAATCTATCACATATACTATACGGCTTCGTGCCGATATGCGGAGGC 21688 | || || ||||| | ||| | || || ||||| | || || ||||| || Sbjct 1270 CGTATACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGT 1211 Query 21689 GACGGCATCAACGACGCGCTAAAAACGGTGCCTGGCAGTTTTGAGGCATTGCAACGTTCG 21748 |||||||| || || ||||| | | |||||||| | ||| ||||||| || Sbjct 1210 GACGGCATAAATGATAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCC 1151 Query 21749 TGTGCGGGTCGGGCCGATTTCAAGGTGGCTATACACGATCCGTGGGCCGCAATACAAAAG 21808 ||| || || | || ||||| || | || |||||||| ||||| ||| ||||||| Sbjct 1150 TGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 1091 Query 21809 CCCCAAAAGGGCGTCTCGTCATGGAACGAACCGTACAAAGGCAACTTTGGTCAACTGATG 21868 || ||||| || | || ||||||||||| || ||||||||||||||||| ||| | ||| Sbjct 1090 CCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATG 1031 Query 21869 GCAATGAAGAGGGCCAATCCTCACATTAAAG--TGTTCGCATCGATCGGCGGATGGACTC 21926 || | || ||| ||| | ||| ||| | ||| | ||||| || || ||||| | Sbjct 1030 TCACTAAAACAAGCCCGCCCTGA-ATTGAAGATTCTTC-CCTCGATTGGTGGGTGGACGC 973 Query 21927 TGTCCGATCCATT----TTATCATATGCACGACGCCGACGTCAGACGGGTGTTTATCGAT 21982 | ||||||| || || | | || || | | | | ||| ||| | | Sbjct 972 TTGCCGATCCTTTCTTCTTTTTAGTTG-ACAAATCTAAAAGAACACG---ATTTGTGCAG 917 Query 21983 TCAGTTGAAGAATTTCTGCTCACGTGGAAGTTCTATGACGGCGTCCACATCGATTGGGAG 22042 ||||| | || ||||| || || ||||| |||| || || || | |||||||||||| Sbjct 916 TCAGTAAAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAG 857 Query 22043 TTTCCCGGCGGCAAGGGAGCCAACCCCGAC 22072 ||||| || || || || || ||||| ||| Sbjct 856 TTTCCTGGTGGTAAAGGTGCTAACCCTGAC 827 >seq117972 Length=685 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||| ||||| || | ||||| ||||||||||||||||||||| | |||||| ||| Sbjct 60 CAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTGCGACCATC 119 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || | || || ||||| |||| || ||||||||||| || || |||||||| ||||| Sbjct 120 TTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTCTTTGTC 179 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | ||||| ||| || | ||| | || || | | || || || | || | || Sbjct 180 TTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGT 239 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || ||||| |||||||||||||| Sbjct 240 CTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272 >seq218964 Length=932 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || |||| | ||| |||| ||| | ||||| ||||||||||||||||| || Sbjct 866 CCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAA 807 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | |||||| || || | || ||||||||| | || | ||| || ||||| ||||| Sbjct 806 AGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 747 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||| ||||||||| |||||| ||| || | ||| | ||||| | || || Sbjct 746 ATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACT 687 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | ||||| || || || ||||| || ||||||||||| Sbjct 686 TCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 640 >seq153336 Length=250 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 |||||| ||||| | ||||| || || || ||||| || || || |||||| ||| Sbjct 20 CAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGACAGTGTGCGCCCATC 79 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || || || ||||| ||| | || | | || || || ||||| ||||| |||||||| Sbjct 80 TTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATGCCTTCCTTGTC 139 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGT-GCTCTCGACCTCGACGGTCACCG 118704 | ||| ||| ||||| | ||||| || || | ||| || || || | || | | Sbjct 140 TTGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCT-TCCACTTCTAAAGTAATAG 198 Query 118705 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || || |||||||||||||| ||||| Sbjct 199 TTTTTCCAGTTAGTGTTTTTACAAAAATTTGCAT 232 >seq2512 Length=3386 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 105990 GGCTTCTATTACATCGGTCGCGGAGATGAGGTACGTTGTGCCTTTTGCAAGGTCGAGATT 106049 |||||||||||| | || ||||| ||||| ||||| || || ||||| || || || ||| Sbjct 1496 GGCTTCTATTACCTGGGCCGCGGTGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAATT 1437 Query 106050 ATGAATTGGAGAGAGGGCGACGATCCGATTGTCGATCACAATAGATGGGCGCCGCAATGC 106109 ||||| ||| | |||||||||||| | || ||| | | |||||||| || ||| Sbjct 1436 ATGAAATGGGTCGCGGGCGACGATCCCGCTAAGGACCACCAACGGTGGGCGCCCCAGTGC 1377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432123794447608