Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq21365 241 1e-58 seq33957 109 6e-19 seq313031 107 2e-18 seq149208 96.9 4e-15 seq86066 96.9 4e-15 seq93196 95.1 1e-14 seq38429 93.3 5e-14 seq117972 89.7 6e-13 seq21145 82.4 9e-11 >seq21365 Length=2821 Score = 241 bits (266), Expect = 1e-58 Identities = 646/980 (66%), Gaps = 21/980 (2%) Strand=Plus/Minus Query 96454 AAAGTGACGGGGGCTTATTTTGTAGAATGGGGCGTGTACGATCGTAAGTTTCCCGCGGAC 96513 ||||| ||| || || || ||||||||||| || ||| | | || || |||| ||| Sbjct 1330 AAAGTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGAT 1271 Query 96514 AAGGTGCCCATTCCCAATCTGACGCATCTATTGTACGGTTTTATACCCATTTGCGGAGGC 96573 | || || || ||||| || ||| | | || || ||||| ||||||||||| || Sbjct 1270 CGTATACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGT 1211 Query 96574 GACGGTATCAACGACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAATCA 96633 ||||| || || || || ||||| || | ||| ||| | || | ||| || Sbjct 1210 GACGGCATAAATGATAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCC 1151 Query 96634 TGTGCCGGCAGAGACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAAAA 96693 ||| |||| | || || ||||| || |||||||| | | || |||||||| Sbjct 1150 TGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 1091 Query 96694 CCGCAAAAAGGTGTTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCATG 96753 || |||||||| | || || || || || ||| ||||| |||||||| | ||| Sbjct 1090 CCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATG 1031 Query 96754 GCTATTCGCAAACATAA-----CCCTCATTTAAAAATT-TTGCCTAGCATCGGTGGTTGG 96807 || | || | || |||| | || || ||| || ||| | || ||||| ||| Sbjct 1030 -----TCACTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCG-ATTGGTGGGTGG 977 Query 96808 ACACTGAGCGACCCTTTCTATTTTTTCGCCGACGACTATAAACGAAAAGTATTTGTGGAC 96867 || || ||| ||||||| ||||| | ||| | | |||| ||| | ||||||| | Sbjct 976 ACGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAAAGAACACGATTTGTGCAG 917 Query 96868 TCGGTTCGTGAATTCTTGCAAGTGTGGAAGTTTTTCGATGGAGTAGACATCGACTGGGAG 96927 || || || || | | | ||||| || |||||||| ||||| ||||| |||||| Sbjct 916 TCAGTAAAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAG 857 Query 96928 TTTCCCGGCGGAAAGGGTGCCAACCCCGACGTAGGCGATCCTAGCGTGGATGGAAACACA 96987 ||||| || || || ||||| ||||| ||| | || | || | | ||||| | Sbjct 856 TTTCCTGGTGGTAAAGGTGCTAACCCTGACCTCGG-TAGCCCA--GAAGATGGTGATTGT 800 Query 96988 TATGTAACACTATTGAAAGAACTACGCCTAATGCTAGACAAACTGGGTGTGGTGAACAAA 97047 ||||||| | |||||||| |||| ||||| || | || | | | || || Sbjct 799 TATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAGCT--CTCAGCT-AAGAAT 743 Query 97048 CGCGTG---TACGAGTTGACCAGCGCCGTGGGAGCAGGCTACGATAAAATAGACGTGATA 97104 || | ||||| ||||| || | | | || | |||||||| | || | Sbjct 742 GGCAAGAAATACGAATTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTGTT 683 Query 97105 GATTACTCTTCGGCTAGTCAATATTTGGATCATGTGTTTTTAATGAGTTACGACTTCAAA 97164 || ||| |||| | ||| |||||||| | || || |||||||| |||||||| Sbjct 682 GACTACGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAG 623 Query 97165 GGCGCATGGTCCAACACGGATTTGGGTCATCAAACACCATTGTACGCACCTTCGTGGAAC 97224 || || ||||| || | | || |||||||||||||||||||| ||| | ||||| Sbjct 622 GGAGCCTGGTCAAATGATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGAAT 563 Query 97225 CCTGACGACAAGTACACAACTGACTATGCCGTAAAAGAACTGCTCAAGCAAAAAGTACCT 97284 || | || | |||||| |||||| | |||||| | || | || ||| | Sbjct 562 CCCAAGGAAACTTACACATCTGACTTCGGAGTAAAATACTTGTTGGCACAGGGAGTGAAT 503 Query 97285 TCCAACAAAATTGTAGTTGGAGTCGCCATGTACGGCAGAGGGTGGAGTGGTGTGCACGAT 97344 | || || |||||| | || || |||||||| || | || |||| ||| || || ||| Sbjct 502 CCTAAGAAGATTGTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGTTCATGAT 443 Query 97345 TACAAGAACAATAACGTATTTACGGGCGTCGCCACAGGTCCGGTAAAAGGTACATGGGAA 97404 ||| | |||| | || || ||| ||| || || || || |||||||| ||| || Sbjct 442 TACGAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCAA 383 Query 97405 AACGGTGTCGTCGATTATAG 97424 |||| || || ||||| || Sbjct 382 GACGGAGTGGTTGATTACAG 363 >seq33957 Length=3082 Score = 109 bits (120), Expect = 6e-19 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 3082 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 3023 Query 60126 TACTACCGAGGATTG 60140 ||||||||||||||| Sbjct 3022 TACTACCGAGGATTG 3008 >seq313031 Length=621 Score = 107 bits (118), Expect = 2e-18 Identities = 79/91 (87%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 15 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 74 Query 60126 TACTACCGAGGATTGAATATATAAC-TTGAA 60155 ||||||||||||| | | || ||| ||||| Sbjct 75 TACTACCGAGGATGGTGTTTACAACGTTGAA 105 >seq149208 Length=369 Score = 96.9 bits (106), Expect = 4e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 |||||||||| ||| || ||||| ||||| ||| ||| || ||||||||||| |||| Sbjct 121 CCTCCTCTTAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 62 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069 ||||| || | || || ||||||||||||||||| || || || || || || Sbjct 61 AGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATC 9 >seq86066 Length=952 Score = 96.9 bits (106), Expect = 4e-15 Identities = 64/71 (90%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 60071 CGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 60130 |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 947 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 888 Query 60131 CCGAGGATTGA 60141 |||| || ||| Sbjct 887 CCGAAGACTGA 877 >seq93196 Length=385 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| |||||||| |||| ||||||||||||||||||||| ||||| | ||||| Sbjct 360 CTCCCCGGCGGGGAATCGGACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTATCACTA 301 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 300 TACTACCGAGGA 289 >seq38429 Length=2819 Score = 93.3 bits (102), Expect = 5e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 ||||| |||| ||||| ||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 1709 TTCTCTCCGGCGGGGAACCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 1768 Query 60124 TATACTACCGA 60134 ||||||||||| Sbjct 1769 TATACTACCGA 1779 >seq117972 Length=685 Score = 89.7 bits (98), Expect = 6e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||| |||||||| | || || |||||||| |||||||| | ||||| || | Sbjct 57 ACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTGCGACC 116 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || | ||||||||||| || || || |||||||| || | || | || ||| || Sbjct 117 ATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTCTTT 176 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| |||||| ||| | | | | || || | |||||| || | || || Sbjct 177 GTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAAT 236 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 ||| || || ||||| || || ||||| || |||||| Sbjct 237 GGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATT 273 >seq21145 Length=3038 Score = 82.4 bits (90), Expect = 9e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60067 TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTAT 60126 ||| || ||||||||||||||| ||||||| | |||||| ||| ||||| |||||||| Sbjct 801 TCCCCGACAGGGAATCGAACCCCGGTCTCCTGTGTGACATTTGGAGATACTTACCACTAT 742 Query 60127 ACTACCGAGGATT 60139 |||||| |||||| Sbjct 741 ACTACCTAGGATT 729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569510501824720