Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq218964 111 2e-19 seq117972 111 2e-19 seq153336 98.7 1e-15 seq131538 89.7 8e-13 >seq218964 Length=932 Score = 111 bits (122), Expect = 2e-19 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| | || | ||||||| || | |||||||||||| || || || |||| Sbjct 868 TTCCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTG 809 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 ||||||| | || || || ||||| |||||||| |||||||| | ||| ||||| |||| Sbjct 808 AAAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 749 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 |||| ||||| || ||||| ||| || ||| ||| | Sbjct 748 GAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAA 689 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280 |||| | || || |||||||| || | |||||| | ||| || |||||||| Sbjct 688 CTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTT 637 >seq117972 Length=685 Score = 111 bits (122), Expect = 2e-19 Identities = 109/138 (79%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | ||| | ||||| ||||||| ||||||||| ||| || ||||||||||| || Sbjct 502 CCACCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGA-ATATTATAATCAGA 560 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 || || | || ||| || | |||||||||||||||||| | || || || || || || Sbjct 561 TAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGG 620 Query 146170 AATTCCTTCTTTATCTTG 146187 ||| |||||||| ||||| Sbjct 621 AATACCTTCTTTGTCTTG 638 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| | ||| | ||||||||||| | |||||||||||| || || ||||| | Sbjct 44 TTCCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGG 103 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 ||||||| | | ||| || ||||| || |||||||| || | | |||||||| || | Sbjct 104 AAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTG 163 Query 146169 GAATTCCTTCTTTATCTTG 146187 | || || ||||| ||||| Sbjct 164 GGATGCCCTCTTTGTCTTG 182 Score = 93.3 bits (102), Expect = 6e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| | | | ||| ||||| |||||||||||||| || || || || | Sbjct 272 TTCCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAG 331 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||| || | | ||| || ||||| || || || ||||| | | ||| ||||| |||| Sbjct 332 AAAGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAG 391 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||| |||||||| ||||| Sbjct 392 GAATGCCTTCTTTGTCTTG 410 >seq153336 Length=250 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/230 (67%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| || || | || || || || ||||||||||| || || ||||| || | Sbjct 4 TTCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCG 63 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || || | | ||| || | ||| ||||| || |||||||||||||| || || |||| Sbjct 64 ACAGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAG 123 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 |||| ||||| || ||||| ||||| ||| ||| | Sbjct 124 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTTCCA 183 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 |||||| || || ||||| || |||| |||||| | || ||||||||| Sbjct 184 CTTCTAAAGTAATAGTTTTTCCAGTTAGTGTTTTTACAAAAATTTGCATT 233 >seq131538 Length=717 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| ||||| | || | || | |||||||||||| ||||| ||||| || Sbjct 157 CCACCTCTCAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAT 98 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | |||| | ||| || | ||| || || ||||||||||| || || || || |||||| Sbjct 97 AATGTTCGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGA 38 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||| || || Sbjct 37 ATGCCTTCTTTGTCCTG 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740526512622080