Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq218964 109 4e-19
seq117972 82.4 5e-11
>seq218964
Length=932
Score = 109 bits (120), Expect = 4e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || || || | || |||||||| | |||| |||||| || ||||||||||| ||
Sbjct 867 TCCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGA 808
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| ||| |||| ||||| ||||| || |||||||| | || || || || ||
Sbjct 807 AAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGG 748
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGC-TTTAGATCGGCTATCGAATCGGTCGATTCGA 34340
| || |||||||| || ||| || |||| || | || | |||| | ||| |
Sbjct 747 AATGCCTTCCTTGTCTTGAAT-TTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAA 689
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| |||| || |||||||| || ||||| |||||||| || ||||||||
Sbjct 688 CTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 640
>seq117972
Length=685
Score = 82.4 bits (90), Expect = 5e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 34187 TGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGC 34246
|| |||||| |||||| || ||||||||||| || || ||| | || ||||| |||
Sbjct 298 TGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTACGACCATCTTCCAATTGC 357
Query 34247 TTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTT 34306
||||| |||||||| || || || || || || | || || ||||| || ||
Sbjct 358 TTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTA 417
Query 34307 TGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTG 34366
||||| || | || | || | | ||| || || | || || |||||||| ||
Sbjct 418 GCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAAAGTAATTGTTTTGCCAGTA 477
Query 34367 AGAGTTTTCACAAAGATCTGCAT 34389
|| ||||| ||||| || |||||
Sbjct 478 AGTGTTTTAACAAAAATTTGCAT 500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 321801096741440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |