Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq213871 131 2e-25 seq197295 100 3e-16 >seq213871 Length=423 Score = 131 bits (144), Expect = 2e-25 Identities = 165/225 (73%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 14226 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 14283 ||||||| ||| ||||||||| || ||||| |||||||| |||||||| |||||||| Sbjct 354 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTTAATCCGGGCATCAAGCCTCGTTT 297 Query 14284 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14343 ||| ||||||||||||| ||| || || || || |||||||||||||| || ||||| Sbjct 296 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAA 237 Query 14344 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14403 || || | ||||||||||| | || | ||| | ||||| | | ||||| || Sbjct 236 AGCGATAATACGTTCTCCAAATGTGGCAGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 177 Query 14404 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14448 | || || |||||| | | || ||||| ||||| || || Sbjct 176 TGCCTTCTTCTTAATACATGGTAGAGTCTCAATTGCATTGAACAA 132 >seq197295 Length=1118 Score = 100 bits (110), Expect = 3e-16 Identities = 133/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 14474 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14533 || || || ||||| | ||| ||||| || || || | ||||||||||| || ||| Sbjct 730 ATATAAGTGTCAATTAATAAAGAGTACATCTCCGAATGAACATTTTCCATAGCAATTTGA 671 Query 14534 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAA 14593 |||||||| || || || ||||| | | ||| |||||| | || | || |||| Sbjct 670 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGCGAGAAACGCTCCACCAAG 611 Query 14594 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14653 || |||||||| ||||||||| ||| ||||| ||||| || | | ||| ||||| | | Sbjct 610 TTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGTTTGATAAAATGT 551 Query 14654 TGCTC 14658 | ||| Sbjct 550 TTCTC 546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 480399492266320