Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 196 4e-45
seq117972 109 4e-19
seq218964 105 5e-18
seq2512 93.3 3e-14
>seq21365
Length=2821
Score = 196 bits (216), Expect = 4e-45
Identities = 776/1198 (65%), Gaps = 45/1198 (4%)
Strand=Plus/Plus
Query 90774 GTTCATTGTGTTGAGCAGATCACCATTATCGGCGTCAATTTCCCATGCAAACAATCCACC 90833
|||||| | || || |||||||| || |||||||| |||||||| ||||| | |||||
Sbjct 143 GTTCATGGCATTCAGTAGATCACCGTTGTCGGCGTCGATTTCCCAAGCAAAGAGACCACC 202
Query 90834 CAACTTGTT-TTGATCAACGTATCTGCTTTTAGCCAAAACGGAATCAACGCTGTCAAACG 90892
| ||||| || ||| | ||| | | || | | ||| || | | ||||| | |
Sbjct 203 TAGTTTGTTATTTCTCA-CATATTTACCCTTTTCAATAACTGATCTAGCATTGTCATAGG 261
Query 90893 TGATAAGGTCGGCTTTATTTTTGT-TAAAAACATATGATGCTTCGGCAACTTTGTCAAAC 90951
| | |||||| | | | | || | || ||||| | |||| ||| || ||||| |
Sbjct 262 TTACAAGGTCTCCAGT-TGATGGTCTGAAGACATAAGGAGCTTGGGCGACATTGTCGTAA 320
Query 90952 TTGTACACGTACTCG--TTTAT-ATTTTCTTTT---ATTTGGCGATAGTCAACGACTCCA 91005
| | | ||| | || | | |||| || || | | || ||||| |||||
Sbjct 321 TGAAATTCCCACTTGCCTTGAGCAATTTCATTCGCAATCTCTCTGTAATCAACCACTCCG 380
Query 91006 TCTTCCCACGTGCCCGTAACCGGACCGTTAGCGACACCA-TCAA---AATAGTTATCACC 91061
|||| ||| || || | || || || ||||| || | || ||| ||| ||
Sbjct 381 TCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAAT-GTTGTC--- 436
Query 91062 TTTGTAATCAGACACGCCTGTCCAGCCGCGCCCGTACATGGCGACACCAATAATTATTTT 91121
|| ||||||| ||||| ||||| || || || |||||||| ||||| | | || ||
Sbjct 437 TTCGTAATCATGAACGCCAGTCCAACCACGACCATACATGGCAACACCTAATACAATCTT 496
Query 91122 ACTAGAATCAACACCTTGTTTTGTGAGCA-----TTTGCACGGCATGATGCGTGGTGTAC 91176
||| || || || ||| | | || ||| | | | | | | |||||
Sbjct 497 CTTAGGATTCACTCCCTGT---GCCAACAAGTATTTTACTCCGAAG--TCAGATGTGTAA 551
Query 91177 AACTCGTTCGGGTTCCATTGCGGGGCGTATAGTGTCGTTTGATAGCCCAA----ATCGGT 91232
|| || || |||||| || ||||| | || ||||||| | |||| |||
Sbjct 552 GTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGAT-GTCCAAGAGTATC--- 607
Query 91233 ATTTGACCAAGCTCCTTTAAAATCGTAAGTCATGACATATATTTTACTCAAAAACTTTTG 91292
||||||||| ||||| || || || ||| |||| | | || | | || | | |||||
Sbjct 608 ATTTGACCAGGCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAATTTTG 667
Query 91293 TGCAGCGTCATAATCGACAAGTTCGATCTTGTCATAACCGGCACCGATTGCGCTTGTCAA 91352
|| | | || || |||| || ||| || || | || | | || || |||||
Sbjct 668 AGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCAA 727
Query 91353 TTCGTACACTTTACCTGTTTGTGCTTGCAAATCATCCAACATGTCACGCAACTCTTTTAG 91412
|||||| || || | | ||| | ||||| | ||| ||||| || ||||| |
Sbjct 728 TTCGTATTTCTTGCCATTCTTAGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCAT 787
Query 91413 CAAAACAATGTATGTAGCAGCGTCGCGTTTCGGATCGCCAATGGCCGGATTAGCGCCTTT 91472
|||| | || | || | || | | || | || | | | || ||||| |||||
Sbjct 788 CAAACTTACATAACAATCACCATCT--TCTGGGCTA-CCGAGGTCAGGGTTAGCACCTTT 844
Query 91473 ACCGCCCGGAAATTCCCAATCAATATCTACACCGTCAAAAAATTTCCAAACTTGCAAAAA 91532
||| || ||||| |||||||| ||||||||||| || || |||||||| | | | |||
Sbjct 845 ACCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAGGAGAAA 904
Query 91533 TTCTTTAACCGAATCAACGAA-CACGTT-TCTTCG-TTTGACATCGTGCATAAAATAGAA 91589
|| || || || | || || | ||| | || | |||| || | | ||| ||||
Sbjct 905 CTCCTTTACTGACTGCACAAATCGTGTTCTTTTAGATTTGTCAACT---AAAAAGAAGAA 961
Query 91590 CGGGTCCGACAAAGTCCAGCCACCGATGGACGGTAAAACTTTTAAATGCGGGTTGGCCAA 91649
|| || | | ||||| ||||| || || || | || || || | ||| |||
Sbjct 962 AGGATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAATTCAGGGCGGGCTTG 1021
Query 91650 CTTGGCGGCCATTATCTGACCAAAGTTGCCCTTGTAAGGCTCGTTCCAAGCGGATACACC 91709
|| | ||||| || ||||||||||| ||||| ||||||||||| | || | ||
Sbjct 1022 TTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCC 1081
Query 91710 TTTTTGTGGTTTTTGTATGGCTGCCCACGGATCGTGTATGGAAACTTTAAAATCATCGCG 91769
||||||||||||||||| |||||||| |||||||| || || ||||| || || || ||
Sbjct 1082 TTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACG 1141
Query 91770 TCCTTTGCACGATCGTTGCAAATTTTCAAAACTACCAGGTATTGTTTTGAGGGCATCGTT 91829
|| | || || ||||||| || ||||| || || ||| | | ||| ||
Sbjct 1142 GCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTATCATT 1201
Query 91830 TAATCCATCGCCTCCGCAAATGGGTATAAAACCGTACAACAGATGGGACAAATTTGGCAG 91889
|| || || || ||||||||||| ||||| || || | || ||| | | ||| || |
Sbjct 1202 TATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGTAT 1261
Query 91890 CGGCACCTTGTCGATTGGAAAGTTGCGTCCGTACACGCCCCATTCAACAAAGTACGCG 91947
|| | || | || || || | ||| || |||||||| || ||||| |||
Sbjct 1262 AGGTATACGATCCACGGGGAATTTCCTAGGGTAGACACCCCATTCTACGAAGTAGGCG 1319
>seq117972
Length=685
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172
|||||| | || | || ||||||||||| ||||||||||| | | ||| || |||
Sbjct 288 AAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTACGACCATC 347
Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232
||||||||| |||||||| | ||||| | ||||||||| || | |||||| || ||
Sbjct 348 TTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTC 407
Query 18233 GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292
|||| ||| || | | ||| |||||| || || ||| | || || |
Sbjct 408 TTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAAAGTAATTGT 467
Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|||||| || | |||||| ||||||||||||||
Sbjct 468 TTTGCCAGTAAGTGTTTTAACAAAAATTTGCAT 500
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
||| || || || | | ||||| ||||| || |||||||||||||||||||| ||||
Sbjct 45 TCCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGA 104
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| || || |||||||||||| || || ||| ||||||| | || ||||| ||
Sbjct 105 AAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGG 164
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276
| ||| || || || |||| | || || || | | ||| ||| ||| ||| ||
Sbjct 165 GATGCCCTCTTTGTCTTGGATTT-TAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCA 223
Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326
||| | || ||| | || || || | ||||| |||||||| ||||||
Sbjct 224 CTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATT 273
>seq218964
Length=932
Score = 105 bits (116), Expect = 5e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157
||| || ||||| | | ||||| |||||| || ||||||||||||||||||||||| |
Sbjct 867 TCCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGA 808
Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217
| || | ||||||||||| || || || | || | | ||||||||| ||
Sbjct 807 AAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGG 748
Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276
| ||||||||| || ||||| | || || || | | ||| |||||| || ||
Sbjct 747 AATGCCTTCCTTGTCTTGAATTT-TCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAA 689
Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
||| | || ||| |||| || || | |||||| || ||||| ||||||||
Sbjct 688 CTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTT 637
>seq2512
Length=3386
Score = 93.3 bits (102), Expect = 3e-14
Identities = 156/226 (69%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 20082 CGCACGCTTTATTCACAACATTTTGCACATAATCACGCCCTTTGACAAGCAGCAAGTATC 20141
||||||| | | || || || || ||||| || || || || || ||| | | |||
Sbjct 968 CGCACGCCTCCGTGACCACCTTCTGTACATAGTCTCGGCCCTTTACCAGCTGGACGTAAG 1027
Query 20142 CACAGTTACTAAACCAACGTGCGTGTTGTTCCCATGGAATGTCATCATTTTCCCAATCTT 20201
| || ||||| || ||||| || ||||| || | ||| || || ||||| || |
Sbjct 1028 CGCATCGGTCGAACCAGCGCGCGTGCTGCTCCCACGGCACGTCGTCGTTCTCCCAGTCCT 1087
Query 20202 TAAGGCCGCCATTGCAATAAAAACACAAAGTTTTATCACCGCGCGACGTATAATAAAATC 20261
| || ||||| | || || || ||| |||||| || || | || || | ||||
Sbjct 1088 TGAGCCCGCCGTCACAGTAGAAGCACTTAGTTTTGTCGCCCTGGCCGGTGTAGAAGAATC 1147
Query 20262 CCGCTTCGGCCAATTCATCGGGCCTTTGCTTCATGCTGCGCGGCCA 20307
|||| ||||| | ||| ||||| | |||||||||||||| |||||
Sbjct 1148 CCGCCTCGGCGAGTTCCTCGGGTTTCTGCTTCATGCTGCGGGGCCA 1193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 377851733490630
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