Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq21365 257 1e-63 >seq21365 Length=2821 Score = 257 bits (284), Expect = 1e-63 Identities = 873/1344 (65%), Gaps = 37/1344 (3%) Strand=Plus/Plus Query 35666 CCAATATGCATAGCGTTGAGCAAATCGCCGTTGTCCGCATCGATTTCCCATGCGAATAAT 35725 || || | ||| || || || | ||| |||||||| || ||||||||||| || || | Sbjct 138 CCCATGTTCATGGCATTCAGTAGATCACCGTTGTCGGCGTCGATTTCCCAAGCAAAGAGA 197 Query 35726 CCGCCGAGTCTACGCTGAAGCACGTATTCGCCTTTGGCCAGTACCGATCTTTCGCTGTCA 35785 || || ||| | | ||| |||| || || | | || ||||| | ||||| Sbjct 198 CCACCTAGTTTGTTATTTCTCACATATTTACCCTTTTCAATAACTGATCTAGCATTGTCA 257 Query 35786 TACGATATTAAGTCGCCAGAGGCGCGGTC-GAATACGTACGCAGCCTTGGCCACGTCGTC 35844 || | || | ||| |||| | |||| ||| || || | ||| | ||| || | ||| Sbjct 258 TAGGTTACAAGGTCTCCAGTTGAT-GGTCTGAAGACATAAGGAGCTTGGGCGACATTGTC 316 Query 35845 G------AATGCGTATTCGTAACGCGAAATGTTTTTAGCAATCTGTCTGTAGTCGACCAC 35898 | ||| | | | | | | ||| | || ||||||| |||||| || ||||| Sbjct 317 GTAATGAAATTCCCACTTGCCTTGAGCAATTTCATTCGCAATCTCTCTGTAATCAACCAC 376 Query 35899 GCCGTTTTCCCATGTACCCGTGATCGGTCCGACGGCTACGCCACTGAATGGATTGTCACT 35958 |||| || ||| ||||| ||| ||||| || ||| |||| ||| ||| Sbjct 377 TCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAATGTTGTC 436 Query 35959 GTTGTAGTTGTGGACGCCCGTCCAACCGCGGCCGTACATTGCTACGCCCAACACGAGttt 36018 | ||| | || ||||| |||||||| || || ||||| || || || || || | || Sbjct 437 TTCGTAATCATGAACGCCAGTCCAACCACGACCATACATGGCAACACCTAATACAATCTT 496 Query 36019 ttttGGATTCACTCGTTGCGCGAGCAAAGCGTCCACGGCCACGTTGGCGGTGTACGGTTC 36078 || |||||||||| || || | ||| | || | | || | ||||| | ||| Sbjct 497 CTTAGGATTCACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCAGATGTGTAAGTTTC 556 Query 36079 GTTAGGTTTCCACGCGGAACCGTACAGTGCCGTCTGATGACCGAGATCGGTATTAGACCA 36138 || || ||||| || | |||||| || || ||||| || ||| ||| ||||| Sbjct 557 CTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGAGTATCATTTGACCA 616 Query 36139 AGCTCCTTTGAAATCATAACTCATCACGAAAATTTTATCTAAATACTGTTGTGCTCGGTC 36198 ||||| ||||| ||||||||||||| |||||| | ||| | ||| | ||| || | | Sbjct 617 GGCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAATTTTGAGCCTTGCC 676 Query 36199 GTAATTAACCGCGGCGATCTTGTCTATGCCAGCGCTAATCGCTGTGGTGAGTTCTAAAGT 36258 ||| | ||| | ||| || || |||| |||||| || | || | ||| | | Sbjct 677 GTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCAATTCGTATTT 736 Query 36259 ACGATTCGTTTGTATTTGA-ACTTGATCGAGCATGGCGCGCAATTCGCCCAATAAAGCGA 36317 | | || || ||| | | ||||||||| | || ||||| || ||| | Sbjct 737 -CTTGCCATTCTTAGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCATCAAACTTA 795 Query 36318 TATACGTGTTATTGTCGCGTTCCACATCGCCAACGTTTGGATTGGCGCCTTTGCCGCCCG 36377 ||| | | || ||| || | || || || || ||||| || || | Sbjct 796 CATAACAATCACCATC---TTCTGGGCTACCGAGGTCAGGGTTAGCACCTTTACCACCAG 852 Query 36378 GAAATTCCCAATCAATATCGATGCCGTCGAAAAATTTCCATGTCAACACAAATTCACGCA 36437 |||| |||||||| ||||| | || ||||| ||||||||||| | | ||| || | Sbjct 853 GAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAGGAGAAACTCCTTTA 912 Query 36438 CGGATTCGACAAAAATTTGTCGCGTTCGCGCA---TCGTGCATATGATAGAAG---GGAT 36491 | || | ||||| ||| |||| | | || | | ||||| |||| Sbjct 913 CTGACTGCACAAA------TCGTGTTCTTTTAGATTTGTCAACTAAAAAGAAGAAAGGAT 966 Query 36492 CGGACAGTGTCCAACCGCCGATTGATGCCAACACTTTTAGATTG-GGATTGGCCAATTTT 36550 ||| || ||||| || || || || | || | | || ||| || ||| |||| Sbjct 967 CGGCAAGCGTCCACCCACCAATCGAGGG-AAGAATCTTCAATTCAGGGCGGGCTTGTTTT 1025 Query 36551 GCTGCCATTAATTGACCAAAATTGCCTTTGTAGGGTTCGTTCCATGCGCTAACGCCTGTT 36610 || ||||||||| ||||| |||||||||||||| |||||||||| | ||| || Sbjct 1026 AGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTTT 1085 Query 36611 TGTGGTTTTTGGAGCGCCGCCCACGGATCGTGTATGGAAACTTTAAAATTGTCCCTGCCA 36670 ||||||||||| | || ||||| |||||||| || || ||||| || | || | ||| Sbjct 1086 TGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGCCG 1145 Query 36671 GCGCACGATCTTTGCAACGCTTCAAAACTCCCCGTGATAGATTTTAAACTGTCGTTTATA 36730 || || | ||||| |||| ||||| || ||| |||||| || || ||||| Sbjct 1146 CTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTATCATTTATG 1205 Query 36731 CCGTCACCGCCGCAAATCGGTATAAATCCGTATAAAATGTGCGAAAGGTTCGGCGTGGGC 36790 ||||||||||||||||| || ||||| || || | | || | ||| || || | || Sbjct 1206 CCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGTATAGGT 1265 Query 36791 ACTTTGTCCACGGGAAAAGATCGACCGTAAACGCCCCATTCGACAAAATAGGCCGCTACG 36850 | |||||||| || | | ||| || |||||||| || || ||||| | || Sbjct 1266 ATACGATCCACGGGGAATTTCCTAGGGTAGACACCCCATTCTACGAAGTAGGCGCCCACA 1325 Query 36851 GTGTGATCAG-TGTTGTACGTATACGGTTTATTGTTTTCTTGCCACGTGTATTGTAACGG 36909 | ||| |||| | | | | |||||||| |||||| | | || |||| || || Sbjct 1326 ACTTTTCCAGATGTT-TGCTTGAATGGTTTATTTTTTTCTCCCAATGTATATTCCAAAGG 1384 Query 36910 TTTTAAATGTTTACCATCGGTGTCTGCGATCACGACTTCTACGGTTTGACTAGC-CGAA- 36967 |||||| | ||||| || || || |||||| | |||| || | || ||| Sbjct 1385 AAGTAAATGACTTCCATCAGTATCGGC---CACGACAATTTCGGTGGGA-TCGCTTGAAC 1440 Query 36968 --CAGCCGTCGGCATTGCACAGTT 36989 |||||||| ||||||| |||| Sbjct 1441 TGCAGCCGTCTTCATTGCAAAGTT 1464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 416658472326080