Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5177 645 3e-180 seq218964 136 4e-27 seq197295 132 4e-26 seq117972 109 5e-19 seq213871 95.1 1e-14 seq156627 89.7 5e-13 >seq5177 Length=4331 Score = 645 bits (714), Expect = 3e-180 Identities = 1228/1791 (69%), Gaps = 44/1791 (2%) Strand=Plus/Minus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 ||||| || |||||||| || || ||||| || ||||| ||||| | || ||||| || Sbjct 3766 TTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCT 3707 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG- 22224 || || | |||||||||||| |||| ||||| |||||||| | ||| ||||| | || Sbjct 3706 GTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCATAGTTAGGT 3647 Query 22225 ----CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGG 22280 ||| |||||| || || || ||||| || || ||||| ||||||| ||| | Sbjct 3646 TTAGCAA---CATGTATG--TTAAAAGATTGACTTTGGTCTATAAATGCTCCTCTATCAG 3592 Query 22281 CGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGA 22340 | ||||| | ||| |||| || || || ||||||||||| ||||||| | || | Sbjct 3591 CCGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTA 3532 Query 22341 TCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTT 22400 | ||| || || ||| || || | || || || |||| ||| || | ||||| Sbjct 3531 TTTCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAGATTTT 3472 Query 22401 TAATCGTATCGTTCCACAAACCGATGGCG-GTCAAATCTTTGACCAGATGACGGTTCACC 22459 | || || | ||| ||| | | || |||||||| | | |||||| ||||||| Sbjct 3471 TCATATCTTCATCCCATAAATC-AGCTCGAGTCAAATCAGTCAGAAGATGATGGTTCACT 3413 Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519 || |||| || || || || || | | ||||||||| || ||||| || ||||| ||| Sbjct 3412 ACAGGAAATTCTCCAGATAAAACTCTTCTTTGGTAAATATTTGATGTAAATGGTTCAAAA 3353 Query 22520 GATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGC 22579 |||||| |||| || || || || || || || || |||||||| || || | || ||| Sbjct 3352 GATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATCAATAGA 3293 Query 22580 GAGTTTCTCAAGCCGTGCTTTGAAAT-TTTACTCTTGAGCATCGACCAGTCCCACAGATC 22638 || || | ||| || || |||| || ||| || ||||| | | ||||||||| || || Sbjct 3292 GAATTACGCAAACCATGTTTTGCTATCTTTTCT-TTGAGGACAGCCCAGTCCCAAAGGTC 3234 Query 22639 GGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCC 22698 | || || |||| ||||||||| || || | | || | || || || || || Sbjct 3233 TGTAGGAGTT---TTGTTCCACATATCATACTGGAGGATACCTTGGCTAGCTGGACTTCC 3177 Query 22699 TTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCC 22758 || || || ||| | ||| | | | | || | ||| || || || || || || || Sbjct 3176 TTGATATGTGCTGTATGCACCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACC 3117 Query 22759 GTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCG----GCGGCGACGCTTTCGT 22814 ||||| || || || || |||| ||| | || || | || | ||||||| Sbjct 3116 ATAATAAATTGTTTCAAATATTTG-TTGATTAA---GGAGTATTGCTTTCTCACTTTCGT 3061 Query 22815 ACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTC 22874 | || || | ||||| ||| || | || |||||||||||||| || |||||||| || | Sbjct 3060 AAGGTATTCTCATCAACACAAATGTATCTGCCATACCCTGAACACCAATACCGATAGGAC 3001 Query 22875 GGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTC 22934 ||| ||| ||| || |||||| || || | |||||| | || ||| || | Sbjct 3000 GGTGCCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTT 2941 Query 22935 TGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGC 22994 |||| || ||| |||||||| || || || | ||| |||| Sbjct 2940 TGTTTAAATTTTGAGTCACAATCTTAGTGATTTCTTTTAATTTTTTAAA--ACTAAA--- 2886 Query 22995 CCGAT--TGTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTC 23052 |||| | | |||||||| |||| | || || || ||||| ||||| || ||||| || Sbjct 2885 TCGATTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTC 2826 Query 23053 GTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAA 23112 |||| || ||||| | |||| || || || ||||||||||| || || ||||| | Sbjct 2825 ATCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAG 2766 Query 23113 ATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGT 23172 ||| | || || || |||| ||||| | |||||| || | ||| || || || || || Sbjct 2765 ATTTTTTTGATTACTCTTTCTGTTGCAAGCATCCTTATACAACATATATGGTGTACCAGT 2706 Query 23173 CTCGACCTGCGACTCGATGATCGCTCGCCACATAGTC-TGAGCGTGAACACGTCGCACGT 23231 ||| || || | || || || | ||| | | || ||||| || ||| | Sbjct 2705 CTCCACTTGAGCTTCTATAATAGACTTCCATA-ACTCTTGAGCTCTGACTCGTTTTATAA 2647 Query 23232 ACCTGCCTTCTTCCTCGTACTTTTGG--TACAACGCGTCAAATTCGGCACCGTAACAGTC 23289 ||| |||||| || || ||||| || | || || ||||| | ||||||||||| Sbjct 2646 ACCGTTTTTCTTCTTCATA--TTTGGCATATAGGGCTTCGAATTCCTCTCCGTAACAGTC 2589 Query 23290 GGCCAGGCCGGGCGATTGCAT-CGGACACATGAGACTCCACATTGAGTCATTTTCAACGC 23348 || ||||| || | | ||| ||||||||||||||||| | || ||||| || | Sbjct 2588 AGCGAGGCCAGGACAAT-CATGAGGACACATGAGACTCCAATCTTCATCCTTTTCTACCC 2530 Query 23349 GTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCT 23408 | ||||||| ||||| |||||||||| ||| || |||||||| | || | || || | Sbjct 2529 TTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTT 2470 Query 23409 CTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGA 23468 | || || ||||||||||| ||||| || || || || | |||||||||||| ||||| | Sbjct 2469 CCTTACCTGTGTTCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTA 2410 Query 23469 GGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGT 23528 ||||| ||||| || || || | || || || || ||||| || || | ||| || | Sbjct 2409 AGTAAATTGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTAT 2350 Query 23529 TGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACAC 23588 ||||||||||||| | ||| ||||| ||||| || || | || ||| || | | Sbjct 2349 TGTTGTACACTCTCAACATTGGCACTAGACCATTCGAAACCCCATTAGTGCCAGCTATAT 2290 Query 23589 TCGAACCTTTTGCTCGAA--CGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGA 23646 || || | |||| || | |||| | || ||||||||||| ||| | ||||| || Sbjct 2289 AAGACCCCTGGGCTCTAATGCAATGTGTA--TGTAAACCTATGCCACCGGCAGATTTAGA 2232 Query 23647 TATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGC 23706 || | || |||||||| | ||| ||| | || || || ||||| || ||||| | || Sbjct 2231 AATTAATGCACATTGTTTTAAAGTATCGAAAATACCTTCAATGCTATCGTCTTTCATAGC 2172 Query 23707 GACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCT 23766 | | ||| || || || | || | || ||||| || ||||||||||| ||||| Sbjct 2171 TATAAGGAAGCAGGAGGAAAGCTGTGGCCGCGGTGTAGCAGCTGAGAACAGTGTAGGGCT 2112 Query 23767 GGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTC 23826 || || ||||| ||| | ||||| | ||| || || | ||| || ||||||||| Sbjct 2111 TGCATGTGTAAAATATTTCTCTGACATCATATTATAAGTATTGATTGCACTATCAATGTC 2052 Query 23827 CTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTC 23877 || || || || || |||| ||| | ||| | ||||| ||||||||| || Sbjct 2051 TTCACCATGAATCCCTATGGAGACTCTCATAAGCATGTGTTGAGGTCTTTC 2001 >seq218964 Length=932 Score = 136 bits (150), Expect = 4e-27 Identities = 161/217 (74%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 31186 ATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGA 31245 |||||| ||||| |||||||| || || || || || ||||| || || | || ||||| Sbjct 634 ATCAAA-ATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGA 692 Query 31246 ACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCC 31305 ||| ||||||| | | |||| || ||| || ||| |||||||||||| | || || Sbjct 693 ACCTTCCGACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCC 752 Query 31306 CGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGA 31365 || || || ||| | || |||||||| || || ||||||||| ||| | || Sbjct 753 AGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGA 812 Query 31366 TTATAACATTCAAAAAGAATCGACTCTTCATCTGGTA 31402 || ||||||||||||||||| |||||||| |||||| Sbjct 813 CTACAACATTCAAAAAGAATCTACTCTTCACCTGGTA 849 >seq197295 Length=1118 Score = 132 bits (146), Expect = 4e-26 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 57645 GATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTC 57704 |||||||| | | ||||| | |||| | ||||||| ||||| || || || || || Sbjct 522 GATTGGGAGACATTAAAAGATTGCGAGAAACATTTTATCAAACATGTCTTAGCATTCTTT 581 Query 57705 GCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAA 57764 || || || |||||||||||||| ||||| ||||| || | || || ||||| || ||| Sbjct 582 GCGGCTTCTGATGGTATTGTTAATGAGAACTTGGTGGAGCGTTTCTCGCAAGAGGTTCAA 641 Query 57765 GTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAA 57824 ||||| || || || ||||| || || |||||| | || || ||||| || ||||| || Sbjct 642 GTGACTGAAGCCAGGTGCTTCTATGGTTTTCAAATTGCTATGGAAAATGTTCATTCGGAG 701 Query 57825 ATGTATTCGCTACTCATCGATACGTA 57850 ||||| || || | || || || || Sbjct 702 ATGTACTCTTTATTAATTGACACTTA 727 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/131 (77%), Gaps = 6/131 (5%) Strand=Plus/Plus Query 57509 TGAACCACTTTTGCAAGAGAATCCCCGTAGA---TTTGTCATGTTTCCGATTGAATATCC 57565 ||| || || ||| |||||| ||| |||| || || || || || || ||||||| Sbjct 268 TGAGCCTCTGTTG--AGAGAAAACCC-TAGACGTTTCGTTATATTCCCAATCCAATATCC 324 Query 57566 AGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGA 57625 ||||| ||| | ||||| ||||| || ||||||||||||||||| | ||||||||||| Sbjct 325 CGACATATGGCAGATGTATAAAAAAGCTGAAGCATCGTTTTGGACTGCAGAAGAAGTAGA 384 Query 57626 CCTGTCTAAGG 57636 | | ||||||| Sbjct 385 CTTATCTAAGG 395 >seq117972 Length=685 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || || || || || || || || || || | || || ||||| || Sbjct 272 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 213 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | |||| || ||| | ||| ||||| || ||| | || || || ||| Sbjct 212 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 153 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || ||||| || || |||||||| | ||| | |||||| ||| Sbjct 152 CAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAAC 93 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTA 31402 |||||||||||||| ||||||||| ||||| Sbjct 92 ATTCAAAAAGAATCTACTCTTCATTTGGTA 63 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || || || || || |||||||| || || | || |||||| | || Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || || | ||| ||||| |||||| | || || || || Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||| ||||| || |||||||| | || | || || ||| Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAAC 321 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || ||||||||||| ||| | ||| | |||||| Sbjct 320 ATCCAAAAAGAATCTACTTTGCATTTAGTACTT 288 >seq213871 Length=423 Score = 95.1 bits (104), Expect = 1e-14 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974 ||||||||||| ||| | | | ||||| ||| || ||||| || | || | Sbjct 168 AAGAAGGCAGACTGGGCGTTACAGTGGATCGGCAGCAAGACTGCCACATTTGGAGAACGT 227 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 | ||||| || || || || || || ||||| || || ||||||||||| |||||||| Sbjct 228 ATTATCGCTTTTGCGGCGGTTGAGGGAATATTTTTCTCAGGCAGCTTTGCTTCAATATTT 287 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGA 58081 ||| |||| ||||| ||| |||||||||| | || || ||||| || Sbjct 288 TGGTTGAAAAAACGAGGCTTGATGCCCGGATTAACTTTCAGCAATGA 334 >seq156627 Length=1589 Score = 89.7 bits (98), Expect = 5e-13 Identities = 117/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Plus Query 58320 CATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACA 58379 || ||| |||| | ||||| || |||||||||||||| ||||| | || ||||| ||| Sbjct 368 CACTACCACACACAGAATCCATTCGATTTTATGAATCTCATCTCATTGGAAGGCAAAACA 427 Query 58380 AACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATGAGCGGTAACAAG 58439 ||||| || || || |||||| | ||||| ||||| | || |||||| ||| ||| Sbjct 428 AACTTCTTTGAGAAGAAAGTTGGAGAATACCAAAAGTGGGGAGTGATG-GCG----CAAC 482 Query 58440 TTGGAGGACGATATTTTCACTTTGGATGCTGCCTTTTAA 58478 | |||| || | || ||||| ||||| | |||||| Sbjct 483 CT-ATGGACAATGTGTTTACTTTAGATGCAGAATTTTAA 520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 443967877450080