Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq5177 459 2e-124 seq197295 129 5e-25 seq213871 96.9 3e-15 >seq5177 Length=4331 Score = 459 bits (508), Expect = 2e-124 Identities = 1168/1762 (66%), Gaps = 29/1762 (2%) Strand=Plus/Minus Query 36805 ATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTC 36864 |||| ||||| ||| | |||||| | | || |||||||| ||||||| |||| || Sbjct 3748 ATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCTGTTTTTAAACCCATCTTC 3689 Query 36865 CATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTC 36924 || ||| ||||| || || ||||| | || |||| ||| | | || ||| | Sbjct 3688 CAAGCGTGGAAATGAATCGACGTTAGTTTCCCATAGTTAGGTTTAGCAACATGTATGTTA 3629 Query 36925 ATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTT 36984 | ||||||||||| |||||||| || ||||| || || ||||| | || | || || Sbjct 3628 AAAGATTGACTTTGGTCTATAAATGCTCCTCTATCAGCCGCCATCTGTA---TGGATGTT 3572 Query 36985 T---GAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCTAAA 37041 | | || |||||||| || ||||| || | | | |||| | | || | | | | Sbjct 3571 TTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTATTTCTTTAGGGATTTTTTCA 3512 Query 37042 ---TGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACATA 37098 | ||| ||||| ||||| | | | ||| ||| || || || | || ||| | | Sbjct 3511 ATTTCTTGTATAGATCCATTGTTGTATATAATAAGATTTTTCATATCTTCATCCCATAAA 3452 Query 37099 TTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAAT 37158 | | | | || ||| || || | || || || |||| ||||||||||| Sbjct 3451 TCAGCTCGAGTCAAATCAGTCAGAAGATGATGGTTCACTACAGGAAATTCTCCAGATAAA 3392 Query 37159 ACTCTTCTT--GTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATA 37216 ||||||||| ||| |||| ||| | ||| ||||||||| || ||| | || | | | Sbjct 3391 ACTCTTCTTTGGTAAATAT-TTGAT-GTAAATGGTTCAAAAGATTCAGTGTTGCCAAGAA 3334 Query 37217 TTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTG 37276 |||| | ||||| ||||| ||||| |||||||| | || ||| | ||| |||||| Sbjct 3333 TTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATCAATAGAGAATTACGCAAACCATGTT 3274 Query 37277 TATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACA 37336 | || | | ||| || || ||| ||||| | ||||| || | || ||||| Sbjct 3273 TTGCTATCTTTTCTTTGAGGACAGCCCAGTCCCAAAGGTCTGTAGGAGTTTTGTTCCACA 3214 Query 37337 TATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGT 37396 ||||||| || || ||||||| || |||||| | | |||||| || | || | Sbjct 3213 TATCATACTGGAGGATACCTTGGCTAGCTGGACTTCCTTGATATGTGCTGTATGCACCTT 3154 Query 37397 AAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTT 37456 ||| |||| ||| ||||||| ||||| ||| ||||||| |||||||| || |||| Sbjct 3153 CTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTT 3094 Query 37457 GTATATTTAATATTTTTGCTTCTTCGCTATCG-AATGCATAGCCCAATAATATAAACACA 37515 || ||| | | | |||||| || || ||| || | || | || || | ||| | Sbjct 3093 GTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAAGGTAT-TCTCATCAACACAAATGTA 3035 Query 37516 TCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGAT 37575 || |||| |||||||||||| ||||| || || | || || |||| || | | | Sbjct 3034 TCTGCCATACCCTGAACACCAATACCGATAGGACGGTGCCTCATATTTGAAGTTTTTGCT 2975 Query 37576 TCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTC 37635 || || |||||| | || | ||| || | ||| |||| ||||| | | || || Sbjct 2974 TCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTCACAATCTTA 2915 Query 37636 GTAATTATTCTCAACTTGTCGAACATAAATACGTTATTATTAACAAATTTACTCAACGAA 37695 || ||| | | || || | || ||||| ||||| | |||||| | | | | Sbjct 2914 GTGATTTCTTTTAATTTTTTAAAACTAAATCGATTATTTTCAACAAACATGTTAAGTGCT 2855 Query 37696 ATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTA 37755 || || | || || || || || ||||||||||| | | |||| | || ||| || Sbjct 2854 ATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTG 2795 Query 37756 CAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAA 37815 || ||||| || || |||| || || | ||| ||||||| ||| | || |||| | Sbjct 2794 CAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTGCAAGCA 2735 Query 37816 TCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCAT 37875 || ||||| | ||||| || || || || | |||||| || |||||||| |||||| Sbjct 2734 TCCTTATACAACATATATGGTGTACCAGTCTCCACTTGAGCTTCTATAATAGACTTCCAT 2675 Query 37876 AAACTTCTT--GCTTTAACGATCGCTTT----AAtttttttCTTTGTTTCGTATTCTATA 37929 || |||| ||| | || ||| ||| | |||||||| ||| |||| | Sbjct 2674 AA--CTCTTGAGCTCTGAC--TCGTTTTATAAACCGTTTTTCTT--CTTCATATTTGGCA 2621 Query 37930 TATAATTTGTTAAAATCATTCCCCCATACA-TCGCATAATCCTGGACATTCGCATGGACA 37988 ||| | || ||| || || ||| || | || ||||| || ||||| Sbjct 2620 TAT-AGGGCTTCGAATTCCTCTCCGTAACAGTCAGCGAGGCCAGGACAATCATGAGGACA 2562 Query 37989 CATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAA 38048 ||| ||| ||| |||||||| |||||||| | || |||||| | ||| |||| |||||| Sbjct 2561 CATGAGACTCCAATCTTCATCCTTTTCTACCCTTTTCATAAACAGATCTGGTATCCATAA 2502 Query 38049 TGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAG 38108 ||| ||| | ||| | | ||| |||||| || ||| |||||| |||| || Sbjct 2501 AGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTGTTCTTTTTTAAATCTAA 2442 Query 38109 AAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTT 38168 || || ||||| || || ||||| || |||| ||||| | | ||| || || | ||| Sbjct 2441 GAACTCAAATATGTCCGCATGCCAAGGCTCTAAGTAAATTGCAAATGCACCGGGACGTTT 2382 Query 38169 ATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTAT 38228 | || || |||| | |||||| | || || || || | ||| ||||| || |||| Sbjct 2381 GTTTCCACCTTGATCTACATATCTGGCAGTATTGTTGTACACTCTCAACATTGGCACTAG 2322 Query 38229 ACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTAT 38288 |||||| || || || | || | |||||||| |||| |||| || | | | Sbjct 2321 ACCATTCGAAACCCCATTAGTGCCAGCTATATAAGACCCCTGGGCTCTAATGCAATGTGT 2262 Query 38289 CGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAA 38348 || ||||| ||||| ||| ||| || ||||| || ||||||||||| ||||| || Sbjct 2261 ATGTAAACCTATGCCACCGGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCGAA 2202 Query 38349 TATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAA 38408 |||||||| || || || || || || | || | || || || | || ||| Sbjct 2201 AATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAGCAGGAGGAAAGCTGTGGCCG 2142 Query 38409 TGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATA 38468 || || | || || | |||||| ||||||| | || |||| || |||| Sbjct 2141 CGGTGTAGCAGCTGAGAACAGTGTAGGGCTTGCATGTGTAAAATATTTCTCTGACATCAT 2082 Query 38469 ATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCAT 38528 |||||| || | ||| || ||| || || | || ||||| |||| || || ||||| Sbjct 2081 ATTATAAGTATTGATTGCACTATCAATGTCTTCACCATGAATCCCTATGGAGACTCTCAT 2022 Query 38529 TAGCATATGTTGTGGTCTTTCT 38550 ||||| ||||| ||||||||| Sbjct 2021 AAGCATGTGTTGAGGTCTTTCT 2000 >seq197295 Length=1118 Score = 129 bits (142), Expect = 5e-25 Identities = 163/220 (74%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 11890 ATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGC 11949 ||| |||| ||| || || ||||||||| ||||| || ||||||| |||||||||||| Sbjct 737 ATCCCTTATATAAGTGTCAATTAATAAAGAGTACATCTCCGAATGAACATTTTCCATAGC 678 Query 11950 TATTTGAAATCCATAGAAACATCGTGCCTCTGAACAC-TGTACATCCACATAAAATCTTT 12008 |||||||| |||||||| || | || || | ||| || || || | || | | Sbjct 677 AATTTGAAAACCATAGAAGCACCTGGCTTCAG-TCACTTGAACCTCTTGCGAGAAACGCT 619 Query 12009 CCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTA 12068 || | || |||||||| |||||||||||| || ||||| ||||||| | |||||| | Sbjct 618 CCACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGTTTGA 559 Query 12069 TAAAGTATTTTTCG---TCTTTAGTTAATTTATCCCAATC 12105 |||| | ||| ||| |||| ||||| | |||||||| Sbjct 558 TAAAATGTTTCTCGCAATCTT---TTAATGTCTCCCAATC 522 >seq213871 Length=423 Score = 96.9 bits (106), Expect = 3e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 11666 ATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATA 11725 || |||||||| || ||||||||||||||||| ||||||||||| | ||||||||| Sbjct 340 ATAAGTTCATTGCTGAAAGTTAATCCGGGCATCAAGCCTCGTTTTTTCAACCAAAATATT 281 Query 11726 GCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCT 11785 | |||||| || || || ||||||||||| || || ||||| || | | | |||| Sbjct 280 GAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAAAGCGATAATACGTTCT 221 Query 11786 CCATAT 11791 ||| || Sbjct 220 CCAAAT 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466634454702560