Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq5177 459 2e-124
seq197295 129 5e-25
seq213871 96.9 3e-15
>seq5177
Length=4331
Score = 459 bits (508), Expect = 2e-124
Identities = 1168/1762 (66%), Gaps = 29/1762 (2%)
Strand=Plus/Minus
Query 36805 ATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTC 36864
|||| ||||| ||| | |||||| | | || |||||||| ||||||| |||| ||
Sbjct 3748 ATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCTGTTTTTAAACCCATCTTC 3689
Query 36865 CATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTC 36924
|| ||| ||||| || || ||||| | || |||| ||| | | || ||| |
Sbjct 3688 CAAGCGTGGAAATGAATCGACGTTAGTTTCCCATAGTTAGGTTTAGCAACATGTATGTTA 3629
Query 36925 ATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTT 36984
| ||||||||||| |||||||| || ||||| || || ||||| | || | || ||
Sbjct 3628 AAAGATTGACTTTGGTCTATAAATGCTCCTCTATCAGCCGCCATCTGTA---TGGATGTT 3572
Query 36985 T---GAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCTAAA 37041
| | || |||||||| || ||||| || | | | |||| | | || | | | |
Sbjct 3571 TTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTATTTCTTTAGGGATTTTTTCA 3512
Query 37042 ---TGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACATA 37098
| ||| ||||| ||||| | | | ||| ||| || || || | || ||| | |
Sbjct 3511 ATTTCTTGTATAGATCCATTGTTGTATATAATAAGATTTTTCATATCTTCATCCCATAAA 3452
Query 37099 TTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAAT 37158
| | | | || ||| || || | || || || |||| |||||||||||
Sbjct 3451 TCAGCTCGAGTCAAATCAGTCAGAAGATGATGGTTCACTACAGGAAATTCTCCAGATAAA 3392
Query 37159 ACTCTTCTT--GTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATA 37216
||||||||| ||| |||| ||| | ||| ||||||||| || ||| | || | | |
Sbjct 3391 ACTCTTCTTTGGTAAATAT-TTGAT-GTAAATGGTTCAAAAGATTCAGTGTTGCCAAGAA 3334
Query 37217 TTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTG 37276
|||| | ||||| ||||| ||||| |||||||| | || ||| | ||| ||||||
Sbjct 3333 TTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATCAATAGAGAATTACGCAAACCATGTT 3274
Query 37277 TATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCACA 37336
| || | | ||| || || ||| ||||| | ||||| || | || |||||
Sbjct 3273 TTGCTATCTTTTCTTTGAGGACAGCCCAGTCCCAAAGGTCTGTAGGAGTTTTGTTCCACA 3214
Query 37337 TATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGT 37396
||||||| || || ||||||| || |||||| | | |||||| || | || |
Sbjct 3213 TATCATACTGGAGGATACCTTGGCTAGCTGGACTTCCTTGATATGTGCTGTATGCACCTT 3154
Query 37397 AAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTT 37456
||| |||| ||| ||||||| ||||| ||| ||||||| |||||||| || ||||
Sbjct 3153 CTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTT 3094
Query 37457 GTATATTTAATATTTTTGCTTCTTCGCTATCG-AATGCATAGCCCAATAATATAAACACA 37515
|| ||| | | | |||||| || || ||| || | || | || || | ||| |
Sbjct 3093 GTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAAGGTAT-TCTCATCAACACAAATGTA 3035
Query 37516 TCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGAT 37575
|| |||| |||||||||||| ||||| || || | || || |||| || | | |
Sbjct 3034 TCTGCCATACCCTGAACACCAATACCGATAGGACGGTGCCTCATATTTGAAGTTTTTGCT 2975
Query 37576 TCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTC 37635
|| || |||||| | || | ||| || | ||| |||| ||||| | | || ||
Sbjct 2974 TCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTCACAATCTTA 2915
Query 37636 GTAATTATTCTCAACTTGTCGAACATAAATACGTTATTATTAACAAATTTACTCAACGAA 37695
|| ||| | | || || | || ||||| ||||| | |||||| | | | |
Sbjct 2914 GTGATTTCTTTTAATTTTTTAAAACTAAATCGATTATTTTCAACAAACATGTTAAGTGCT 2855
Query 37696 ATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTA 37755
|| || | || || || || || ||||||||||| | | |||| | || ||| ||
Sbjct 2854 ATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTG 2795
Query 37756 CAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAA 37815
|| ||||| || || |||| || || | ||| ||||||| ||| | || |||| |
Sbjct 2794 CAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTGCAAGCA 2735
Query 37816 TCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCAT 37875
|| ||||| | ||||| || || || || | |||||| || |||||||| ||||||
Sbjct 2734 TCCTTATACAACATATATGGTGTACCAGTCTCCACTTGAGCTTCTATAATAGACTTCCAT 2675
Query 37876 AAACTTCTT--GCTTTAACGATCGCTTT----AAtttttttCTTTGTTTCGTATTCTATA 37929
|| |||| ||| | || ||| ||| | |||||||| ||| |||| |
Sbjct 2674 AA--CTCTTGAGCTCTGAC--TCGTTTTATAAACCGTTTTTCTT--CTTCATATTTGGCA 2621
Query 37930 TATAATTTGTTAAAATCATTCCCCCATACA-TCGCATAATCCTGGACATTCGCATGGACA 37988
||| | || ||| || || ||| || | || ||||| || |||||
Sbjct 2620 TAT-AGGGCTTCGAATTCCTCTCCGTAACAGTCAGCGAGGCCAGGACAATCATGAGGACA 2562
Query 37989 CATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAA 38048
||| ||| ||| |||||||| |||||||| | || |||||| | ||| |||| ||||||
Sbjct 2561 CATGAGACTCCAATCTTCATCCTTTTCTACCCTTTTCATAAACAGATCTGGTATCCATAA 2502
Query 38049 TGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAG 38108
||| ||| | ||| | | ||| |||||| || ||| |||||| |||| ||
Sbjct 2501 AGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTGTTCTTTTTTAAATCTAA 2442
Query 38109 AAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTT 38168
|| || ||||| || || ||||| || |||| ||||| | | ||| || || | |||
Sbjct 2441 GAACTCAAATATGTCCGCATGCCAAGGCTCTAAGTAAATTGCAAATGCACCGGGACGTTT 2382
Query 38169 ATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTAT 38228
| || || |||| | |||||| | || || || || | ||| ||||| || ||||
Sbjct 2381 GTTTCCACCTTGATCTACATATCTGGCAGTATTGTTGTACACTCTCAACATTGGCACTAG 2322
Query 38229 ACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTTAT 38288
|||||| || || || | || | |||||||| |||| |||| || | | |
Sbjct 2321 ACCATTCGAAACCCCATTAGTGCCAGCTATATAAGACCCCTGGGCTCTAATGCAATGTGT 2262
Query 38289 CGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTGTTTTAACGTATCAAA 38348
|| ||||| ||||| ||| ||| || ||||| || ||||||||||| ||||| ||
Sbjct 2261 ATGTAAACCTATGCCACCGGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCGAA 2202
Query 38349 TATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAA 38408
|||||||| || || || || || || | || | || || || | || |||
Sbjct 2201 AATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAGCAGGAGGAAAGCTGTGGCCG 2142
Query 38409 TGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATA 38468
|| || | || || | |||||| ||||||| | || |||| || ||||
Sbjct 2141 CGGTGTAGCAGCTGAGAACAGTGTAGGGCTTGCATGTGTAAAATATTTCTCTGACATCAT 2082
Query 38469 ATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCAT 38528
|||||| || | ||| || ||| || || | || ||||| |||| || || |||||
Sbjct 2081 ATTATAAGTATTGATTGCACTATCAATGTCTTCACCATGAATCCCTATGGAGACTCTCAT 2022
Query 38529 TAGCATATGTTGTGGTCTTTCT 38550
||||| ||||| |||||||||
Sbjct 2021 AAGCATGTGTTGAGGTCTTTCT 2000
>seq197295
Length=1118
Score = 129 bits (142), Expect = 5e-25
Identities = 163/220 (74%), Gaps = 8/220 (4%)
Strand=Plus/Minus
Query 11890 ATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGC 11949
||| |||| ||| || || ||||||||| ||||| || ||||||| ||||||||||||
Sbjct 737 ATCCCTTATATAAGTGTCAATTAATAAAGAGTACATCTCCGAATGAACATTTTCCATAGC 678
Query 11950 TATTTGAAATCCATAGAAACATCGTGCCTCTGAACAC-TGTACATCCACATAAAATCTTT 12008
|||||||| |||||||| || | || || | ||| || || || | || | |
Sbjct 677 AATTTGAAAACCATAGAAGCACCTGGCTTCAG-TCACTTGAACCTCTTGCGAGAAACGCT 619
Query 12009 CCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTA 12068
|| | || |||||||| |||||||||||| || ||||| ||||||| | |||||| |
Sbjct 618 CCACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGTTTGA 559
Query 12069 TAAAGTATTTTTCG---TCTTTAGTTAATTTATCCCAATC 12105
|||| | ||| ||| |||| ||||| | ||||||||
Sbjct 558 TAAAATGTTTCTCGCAATCTT---TTAATGTCTCCCAATC 522
>seq213871
Length=423
Score = 96.9 bits (106), Expect = 3e-15
Identities = 97/126 (77%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 11666 ATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATA 11725
|| |||||||| || ||||||||||||||||| ||||||||||| | |||||||||
Sbjct 340 ATAAGTTCATTGCTGAAAGTTAATCCGGGCATCAAGCCTCGTTTTTTCAACCAAAATATT 281
Query 11726 GCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCT 11785
| |||||| || || || ||||||||||| || || ||||| || | | | ||||
Sbjct 280 GAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAAAGCGATAATACGTTCT 221
Query 11786 CCATAT 11791
||| ||
Sbjct 220 CCAAAT 215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 466634454702560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |