Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 190 2e-43
seq117972 116 4e-21
seq218964 111 2e-19
seq42689 82.4 8e-11
>seq21365
Length=2821
Score = 190 bits (210), Expect = 2e-43
Identities = 760/1171 (65%), Gaps = 44/1171 (4%)
Strand=Plus/Plus
Query 20330 CAATCTGCCGGTAATCGACCACACCGTCTTCCCAAGTGCCGGCGACGGGACCGGTGGCCG 20389
|||||| | |||||| ||||| ||||||| |||||| || ||| || || || ||
Sbjct 355 CAATCTCTCTGTAATCAACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGT 414
Query 20390 TGCCCGCGAAAGGATTATCACTATCGC--TCTTCA-CACCGGTCCAACCGCGCCCGTACA 20446
|||| | ||| ||| | | ||| || | | | || |||||||| || || ||||
Sbjct 415 TGCCTGTGAAGGGAATGTTGTCTTCGTAATCATGAACGCCAGTCCAACCACGACCATACA 474
Query 20447 TTGCTACACCCAGTGCAATTTTACTT----TTTGGTACGTGTTGCGCGAGCAACGCTTCT 20502
| || ||||| | | |||| || ||| || | | ||| || | ||| || |
Sbjct 475 TGGCAACACCTAATACAATCTT-CTTAGGATTCACTCCCTGT---GCCAACAAGTATTTT 530
Query 20503 ACGGCACGATCTGCGCAATAAGGTTCGTCGGGTTTCCAGGCGGGTGCAAACAATGCGGTT 20562
|| | || | |||| ||| | ||| ||||| || || || |||||| |||
Sbjct 531 ACTCCGAAGTCAGATGTGTAAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTT 590
Query 20563 TGATGTCCCAGATCCGTAGTGGACCAGGCTCCTTTGAAATCGTACGACATTAAGAATATG 20622
|||||||| ||| | | ||||||||||| ||||| || || ||| ||||| ||
Sbjct 591 TGATGTCCAAGAGTATCATTTGACCAGGCTCCCTTGAAGTCATAACTCATCAAGAAAATA 650
Query 20623 GTATCGAGGTATTTTTGCGCTTCGGTGTAATCGACCACAGCAATCTTATCGTCGCCCGCG 20682
||| | || ||||| || | | ||| || || || || ||||| || | |
Sbjct 651 TGATCCATATAATTTTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAG 710
Query 20683 CTTATCGCGCTCGTCAACAGATAGTAACGATTGTGATGTAT-GCCGAGGGCG--TCGAGC 20739
|| || || ||||| | ||| ||| || | || ||| || ||||||
Sbjct 711 CTAATAGCAGAAGTCAAT---TCGTATTTCTTGCCATTCTTAGCTGAGAGCTCATCGAGC 767
Query 20740 ATGCCGCGAAGTTCACGCAGCAGGATCGTGTACGTGGCTCGATCGCGTTCGGCGTCGCCG 20799
|| | || | ||| || || | || | | ||| ||| | | |||
Sbjct 768 ATCTCACGTAATTCTTTCATCAAACTTACATAACAATCACCATC---TTCTGGGCTACCG 824
Query 20800 ACATTGGGGTTCGCGCCATTGCCGCCCGGAAACTCCCAATCAATGTCGACGCCATCAAAG 20859
| | ||||| || || || || || |||||||||||||| || || || ||||| |||
Sbjct 825 AGGTCAGGGTTAGCACCTTTACCACCAGGAAACTCCCAATCGATATCTACACCATCGAAG 884
Query 20860 AATTTCCACGTTTCTAGATACTCTTGGACCGAATCGATAAA-CGTTTGGCGCACGATCTT 20918
|||||||| ||| ||| |||| | || || | | ||| ||| | ||| ||
Sbjct 885 AATTTCCATGTTAGGAGAAACTCCTTTACTGACTGCACAAATCGTGTTCTTTTAGAT-TT 943
Query 20919 GTCGTGCATATGGAAAAATGGGTCCGAAAGTGTCCAGCCCCCGATAGACGGTAACACTTT 20978
||| | | ||| || || || | ||| ||||| || || || || || | | ||
Sbjct 944 GTCAACTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTT 1003
Query 20979 GAGATGCGGGTTCGCCAATTTCGCGGCCATAAGTTGGCCAAAGTTGCCTTTGTACGGTTC 21038
| | ||| || ||| | ||| | ||||||||||||||||||||| || ||
Sbjct 1004 CAATTCAGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTC 1063
Query 21039 GTTCCATGCGCTGACA--CCTTTCTGGGGTTTCTGTATGGCCGCCCACGGATCGTGAATG 21096
||||||| | |||| ||||| || ||||| |||| || ||||| |||||||| ||
Sbjct 1064 GTTCCAT--GAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATT 1121
Query 21097 GCCACCTTAAAGTCGGCACGGCCCGCGCACGAACGTTGCAACGCTTCGAAACTGCCCGGG 21156
| || || ||||| ||||||| || || ||||||| |||| ||||||||| |
Sbjct 1122 GAGACTTTGAAGTCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCG 1181
Query 21157 A-CACTTTTGAGCGCATCGTTGATGCCTTCGCCTCCGCACATGGGCACGAAACCGTACAA 21215
| | ||||| ||| ||| || ||||| || || ||||| ||||| | || || || |
Sbjct 1182 ATCTCTTTTAAGC-TATCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAG 1240
Query 21216 CAAATGCGACAAGTTCGGTGTGGGCACTTTATCGACGGGAAACTGGCGCGGATACACACC 21275
|||||| | | || ||| | || | ||| ||||| || | | || || |||||
Sbjct 1241 CAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGGTAGACACC 1300
Query 21276 CCATTCGACAAAGTATGCTCCAATGATCTTGTCCGAGCGCTTT--TCGAAACGTTTATTG 21333
|||||| || ||||| || || | | ||| ||| || ||| | ||| |||||||
Sbjct 1301 CCATTCTACGAAGTAGGCGCCCA-CAACTTTTCC-AGATGTTTGCTTGAATGGTTTATTT 1358
Query 21334 TTTTCGAGATAATCGTAGA--CGAGCGGCGCGAGATGCGAGCCGTCCGTGTCGGCCACGA 21391
||||| ||| ||| | | | || | ||| || || || ||||||||||
Sbjct 1359 TTTTC-TCCCAAT-GTATATTCCAAAGGAAGTAAATGACTTCCATCAGTATCGGCCACGA 1416
Query 21392 CGACTTTAACCGGTGCGCTAG-TCGAA---CAGCCGTCGACGTTGCACAGTTTCACAGTC 21447
| | || ||||| | | | | ||| |||||||| | ||||| |||| ||| |||
Sbjct 1417 CAATTT----CGGTGGGATCGCTTGAACTGCAGCCGTCTTCATTGCAAAGTTCCACTGTC 1472
Query 21448 ATATCGTACTTGCCGCCCTTAGTAACGGGAA 21478
|| | ||| | || || || | |||| |||
Sbjct 1473 ATTTGGTATCTTCCACCTTTCGAAACGCGAA 1503
>seq117972
Length=685
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | |||||| || || |||| ||||| |||||||||||||| ||||||
Sbjct 46 CCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAA 105
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||| | || ||||||||| |||| || || |||||||| || ||
Sbjct 106 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGG 165
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
||||| |||||||| |||||| ||||| | ||| | || || | ||| |||||
Sbjct 166 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 225
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | || | ||||| || || | ||||| || || || |||||
Sbjct 226 TCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| |||||| | ||||| || | ||||| |||||||| ||||| || ||
Sbjct 274 CCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAA 333
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||| | ||||| | || || || || | || |||||||| ||||| |||||
Sbjct 334 AGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGA 393
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|||||||||||||| |||||| |||| | ||| | |||||| | || || ||
Sbjct 394 ATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACT 453
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | || ||||| || | ||||| || || |||||||||
Sbjct 454 TCTAAAGTAATTGTTTTGCCAGTAAGTGTTTTAACAAAAATTTGCATA 501
>seq218964
Length=932
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || |||| |||||| || | ||||| ||||| |||||||||||||| || ||
Sbjct 866 CCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAA 807
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| |||||| | || || ||||| | |||| |||||| ||||| |||||
Sbjct 806 AGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 747
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|||||||| ||||| ||| |||| | ||||| | ||| | ||||||| || || ||
Sbjct 746 ATGCCTTCCTTGTC-TTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAAC 688
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | || | || || || || | ||||| ||||| || |||||
Sbjct 687 TTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 640
>seq42689
Length=544
Score = 82.4 bits (90), Expect = 8e-11
Identities = 93/122 (76%), Gaps = 2/122 (2%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626
|| || || ||||||||||| || || || ||| | || | ||||| |||||||||||
Sbjct 124 GTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCA-TCTTCTAGCTGTTTACC 66
Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTT 139686
|||| |||||| ||||||||| || || || || ||||| || || |||||| |||
Sbjct 65 AGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTT 6
Query 139687 TA 139688
||
Sbjct 5 TA 4
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494062542980800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |