Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5177 538 5e-148 seq197295 100 4e-16 seq228136 91.5 2e-13 >seq5177 Length=4331 Score = 538 bits (596), Expect = 5e-148 Identities = 1103/1619 (68%), Gaps = 39/1619 (2%) Strand=Plus/Minus Query 78700 ATCTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAG 78759 || ||| | ||||| | || || ||||| | | | ||| ||||| || |||| ||| Sbjct 3775 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAG 3716 Query 78760 TACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAA 78819 |||||||| ||||||| ||| | |||| ||| |||||| || ||||||||| | Sbjct 3715 TACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 3656 Query 78820 TAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTG 78879 || | || | || | ||| || || | |||||||||||| || || || ||||| || Sbjct 3655 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCTCCTCTA 3596 Query 78880 TCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCG 78938 || || ||||| | |||| || || ||| ||| ||||| | ||||| || || || Sbjct 3595 TCAGCCGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 3536 Query 78939 CTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTGCCATAATCCT 78995 |||| | |||| || | ||| | |||| | || |||||| | ||||| Sbjct 3535 CTTATT-TCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAG 3477 Query 78996 ATTCTTGATCTCTTCATTCCATAATTTTCTCTCG-GTTAAAACTCTAAGGAGATGCGGAT 79054 ||| || || ||||||| |||||| | |||| || ||| | | || ||||| | | Sbjct 3476 ATTTTTCATATCTTCATCCCATAAATCAG-CTCGAGTCAAATCAGTCAGAAGATGATGGT 3418 Query 79055 TAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTT 79114 | ||||| ||||||||||||| || ||||| | ||||||||| ||| |||||| Sbjct 3417 TCACTACAGGAAATTCTCCAGATAAAACTCTTCTTTGGTAAATATTTGATGTAAATGGTT 3358 Query 79115 CCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCA 79174 | | |||||| | || || | |||||| ||||| || || || ||||||||||| | || Sbjct 3357 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATCA 3298 Query 79175 ATAAACTATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCA 79232 ||| | ||| | | ||| ||| | || || || ||||| || |||| ||||| Sbjct 3297 ATAGAGAATTACGCAAACC--ATGTTTTGCTATCTTTTCTTTGAGGACAGCCCAGTCCCA 3240 Query 79233 AAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGA 79292 ||| || | || ||||| | |||||| || || ||||| | ||||| Sbjct 3239 AAGGTCTGTAGGAGTTTTGTTCCACATATCATACTGGAGGATACCTTGGCTAGCTGGACT 3180 Query 79293 TCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGC 79352 |||| ||||| || | ||||| ||||| |||||||||||||| || |||||||| Sbjct 3179 TCCTTGATATGTGCTGTATGCACCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGC 3120 Query 79353 TCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAA 79412 || |||||||| ||||| || || | | ||| || | ||||| || || | Sbjct 3119 ACCATAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTA 3060 Query 79413 TGGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTC 79471 || || | | | | | ||| | ||||| | || |||||||||||||||||||| | Sbjct 3059 AGG-TATTCTCATCAACACAAATGTATCTGCCATACCCTGAACACCAATACCGATAGGAC 3001 Query 79472 TATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTT 79531 || ||| |||| ||| ||| ||||| || | ||||||| | |||| ||| || | || Sbjct 3000 GGTGCCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTT 2941 Query 79532 TATTGAGATTCCTGACTATTACTTTGACC-ACATCCTTTAGTTTGAGAAAATCAAATCGT 79590 | || | ||| ||| | | | | | | || |||| ||| |||| |||||| Sbjct 2940 TGTTTAAATTT-TGAGTCACAATCTTAGTGATTTCTTTTAATTTTTTAAAACTAAATCGA 2882 Query 79591 CCATCTATTACAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTA 79650 || | ||||||||||| | || | || || || || || || || || |||| Sbjct 2881 TTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCAT-- 2824 Query 79651 GCATCCGCA---TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAA 79707 | || | | ||||| | | |||||||| || || ||||| ||||| || || | | Sbjct 2823 -CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGA 2765 Query 79708 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTT 79767 |||| ||||||||||||| |||| || ||||||||||| | || | || |||||||| Sbjct 2764 TTTTTTTGATTACTCTTTCTGTTGCAAGCATCCTTATACAACATATATGGTGTACCAGTC 2705 Query 79768 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTA------TTATAGAC 79821 || | |||| ||||||||| | ||||| | || |||| | | ||||| || Sbjct 2704 TCCACTTGAGCTTCTATAATAGACTTCCATAACTCTTGAGCTCTGACTCGTTTTATAAAC 2645 Query 79822 TTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACA 79881 || |||||| ||| |||| | ||||| |||||| || ||||| || Sbjct 2644 C-GT-----TTTTCTTCTTCATATTTGGCATATAGGGCTTCGAATTCCTCTCCGTAACAG 2591 Query 79882 TCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACT 79941 || | | |||||||| || | ||||||||| | ||| ||| |||| | | ||| Sbjct 2590 TCAGCGAGGCCAGGACAATCATGAGGACACATGAGACTCCAATCTTCATCCTTTTCTACC 2531 Query 79942 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCC 80001 | ||||||||| ||||| || ||||| | ||| ||| || ||||| | ||| || Sbjct 2530 CTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCT 2471 Query 80002 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 80061 || || ||||| |||||||| | ||| | |||| | | || || | |||||| || || Sbjct 2470 TCCTTACCTGTGTTCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCT 2411 Query 80062 AAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 80121 ||||| || || | | || || ||||||||||| || ||||||| ||||| || || Sbjct 2410 AAGTAAATTGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTA 2351 Query 80122 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATA 80181 || || || |||||||||||||| | | |||||| || ||||| || || | ||| Sbjct 2350 TTGTTGTACACTCTCAACATTGGCACTAGACCATTCGAAACCCCATTAGTGCCAGCTATA 2291 Query 80182 TAGCTTCCACTGGCACGAAT---ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 80238 || || ||| | ||| || || || || |||||| || || || |||| Sbjct 2290 TAAGACCCCTGGGCTCTAATGCAATGTGTA--TG-TAAACCTATGCCACCGGCAGATTTA 2234 Query 80239 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCAT 80297 || |||||||| ||| ||||||| ||||| | || || || |||||||| || |||| Sbjct 2233 GAAATTAATGCACATTGTTTTAAAGTATCGAAAATACCTTCAATGCTATCGTCTTTCAT 2175 Score = 102 bits (112), Expect = 1e-16 Identities = 89/111 (80%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 80478 CTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 80537 ||| || ||||| |||||||| || ||| ||||||||||||||||||||||||||||||| Sbjct 1678 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 1619 Query 80538 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 80588 | ||| |||| || |||| ||| | |||| | ||| ||||| | ||| Sbjct 1618 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 1568 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 80689 TTTTTTGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCT 80748 || || || || || |||| ||| |||| ||||||||||| || |||||||||||||| Sbjct 1022 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCA 963 Query 80749 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 80808 ||||| | ||| || ||| ||||| ||||| || || ||| | || | || | ||| Sbjct 962 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 903 Query 80809 GTTACTCCATTATATATTCC 80828 ||||| ||| |||||| || Sbjct 902 GTTACACCAGAATATATGCC 883 >seq197295 Length=1118 Score = 100 bits (110), Expect = 4e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 50505 ||||||| ||||||||||| | |||||||| ||||| || || ||||||||||| | | Sbjct 393 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 334 Query 50506 CAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 || ||||| |||||||||||||||| ||||| || Sbjct 333 CATATGTCGGGATATTGGATTGGGAATATAACGAA 299 Score = 93.3 bits (102), Expect = 6e-14 Identities = 131/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 50229 ATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAA 50288 |||||| || || || | | ||||| |||||||||| ||||| || || || ||||| Sbjct 728 ATAAGTGTCAATTAATAAAGAGTACATCTCCGAATGAACATTTTCCATAGCAATTTGAAA 669 Query 50289 TCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATT 50348 || ||||| || || || || || | || || ||| | || || || | || || Sbjct 668 ACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGCGAGAAACGCTCCACCAAGTT 609 Query 50349 TTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTT 50408 ||||| || || || ||| || ||||| || || || |||||||| ||||||||||| Sbjct 608 CTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGTTTGATAAAATGTTT 549 Query 50409 TTCG 50412 ||| Sbjct 548 CTCG 545 >seq228136 Length=1993 Score = 91.5 bits (100), Expect = 2e-13 Identities = 243/369 (66%), Gaps = 7/369 (2%) Strand=Plus/Minus Query 173691 TTATGACTCCA--ATTAATCCCATGTTAGCAGAATCATGTGATTCTGTCAATAAGGCGTT 173748 ||||||| ||| |||| || |||||||||||| | || | || || | | ||| | Sbjct 764 TTATGACCCCAGTATTA--CCAATGTTAGCAGAAGCTTGCAAATCAGTTGAAATGGCTAT 707 Query 173749 TAAAAAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTACAAGT 173808 ||||||| |||| || |||||| | || | ||||| ||||| ||| | || ||||| Sbjct 706 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 647 Query 173809 TCATAAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCTCTCA 173868 |||||||| || ||||| | ||| | | | ||||| ||| | |||| Sbjct 646 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCGGTAATGGCTCA 587 Query 173869 TAAAGTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTACGTCTATCAT 173928 ||||| | || | ||||| || |||| ||||||||| |||| | | | || Sbjct 586 CAAAGTTAGTCATTTTAAAGATTATTTACCTAAAGCATTTCCTAAAGGAGCTGATTTGAT 527 Query 173929 ATTGGATTCTGAAATTGTTCTTGTAGACGAACATAATG---TACCGCTACCGTTTGGAAG 173985 |||||| ||||| | || | || || | ||| || ||| | || ||||| | Sbjct 526 TTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCATTGCCTTTTGGCAC 467 Query 173986 TTTAGGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGTTTGA 174045 |||||||| |||||| | ||||| |||| | || | | ||||| | | ||||| Sbjct 466 ATTAGGTATTCACAAACAATCAGAATTTAAAGATGCTCAAGTTTGTTTATATATATTTGA 407 Query 174046 CTGTTTGTA 174054 || || || Sbjct 406 TTGCTTATA 398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715370818829360