Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq213871 134 1e-26 seq197295 96.9 3e-15 >seq213871 Length=423 Score = 134 bits (148), Expect = 1e-26 Identities = 166/225 (74%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 13894 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13951 ||||||| ||| ||||||||| || ||||| |||||||| |||||||| |||||||| Sbjct 354 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTTAATCCGGGCATCAAGCCTCGTTT 297 Query 13952 ttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 14011 ||| ||||||||||||| |||||| || || || |||||||||||||| || ||||| Sbjct 296 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAA 237 Query 14012 CGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC 14071 || || | ||||||||||| | || | ||| | ||||| | | ||||| || Sbjct 236 AGCGATAATACGTTCTCCAAATGTGGCAGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 177 Query 14072 AGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116 | || || |||||| | | || ||||| ||||| || || Sbjct 176 TGCCTTCTTCTTAATACATGGTAGAGTCTCAATTGCATTGAACAA 132 >seq197295 Length=1118 Score = 96.9 bits (106), Expect = 3e-15 Identities = 135/188 (72%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201 || || || ||||| | ||| ||||| || || || | ||||||||||| || ||| Sbjct 730 ATATAAGTGTCAATTAATAAAGAGTACATCTCCGAATGAACATTTTCCATAGCAATTTGA 671 Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTA---CTTCCGAGTAAAATCTTTCGGCC 14258 |||||||| ||||| || ||||| | | ||| | ||| |||| || | || || Sbjct 670 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGCGAG---AAACGCTCCACC 614 Query 14259 AAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAG 14318 || || |||||||| ||||||||| ||| ||||| ||||| || | | ||| ||||| Sbjct 613 AAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGTTTGATAAAA 554 Query 14319 TATTGCTC 14326 | || ||| Sbjct 553 TGTTTCTC 546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477792453431600